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PI0021390 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021390
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionElf4 domain-containing protein
Genome locationchr05:133492..133794
RNA-Seq ExpressionPI0021390
SyntenyPI0021390
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061471.1 protein ELF4-LIKE 3-like [Cucumis melo var. makuwa]9.4e-4192Show/hide
Query:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPGYKRNRP
        M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMA  V RNVGLIRELNNNIRRVVDLYADLSTS T SIE+GDSAAKPGYKRNRP
Subjt:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPGYKRNRP

KGN60512.1 hypothetical protein Csa_019281 [Cucumis sativus]2.9e-4295Show/hide
Query:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPGYKRNRP
        MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMA NV RNVGLIRELNNNIRRVVDLYADLSTS TKS E+GDSAAKPGYKRNRP
Subjt:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPGYKRNRP

XP_022946747.1 protein ELF4-LIKE 3-like [Cucurbita moschata]3.6e-3274.31Show/hide
Query:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIE---NGDSAA
        MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M DN+ RNVGLIRELNNNIRRVVDLYA LS S TKS+E    G+SAA
Subjt:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIE---NGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

XP_023521403.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo]1.4e-3173.39Show/hide
Query:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIE---NGDSAA
        MEGETLS G      ++DGKM   FQKNFVQVQNIL+QNR+LINEINQN ES+M DN+ RNVGLIRELNNNIRRVVDLYA LS S TKS+E    G+SAA
Subjt:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIE---NGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

XP_038890489.1 protein ELF4-LIKE 3-like [Benincasa hispida]1.0e-3477.57Show/hide
Query:  MEGETLSRG-------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKP
        MEGETLS G       E+DGKMVQ FQKNFVQV+NIL+QNR+LINEINQN ES+M  N+ RNVGLIRELNNNIRRVVDLYADLSTS TKSI++GDSA KP
Subjt:  MEGETLSRG-------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKP

Query:  GYKRNRP
        G+KRNRP
Subjt:  GYKRNRP

TrEMBL top hitse value%identityAlignment
A0A0A0LIL2 Elf4 domain-containing protein1.4e-4295Show/hide
Query:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPGYKRNRP
        MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMA NV RNVGLIRELNNNIRRVVDLYADLSTS TKS E+GDSAAKPGYKRNRP
Subjt:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPGYKRNRP

A0A1U7WX74 protein ELF4-LIKE 3-like7.3e-3172.12Show/hide
Query:  MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPGYK
        MEG+TLS      +IDGK+VQ FQKNFVQVQNIL+QNR+LINEINQNQES++ DN+ RNVGLIRELNNNIRRVVDLYADLSTS TKS++N       G+K
Subjt:  MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPGYK

Query:  RNRP
        R+RP
Subjt:  RNRP

A0A5D3CFW0 Protein ELF4-LIKE 3-like4.5e-4192Show/hide
Query:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPGYKRNRP
        M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMA  V RNVGLIRELNNNIRRVVDLYADLSTS T SIE+GDSAAKPGYKRNRP
Subjt:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPGYKRNRP

A0A6J1G4K6 protein ELF4-LIKE 3-like1.7e-3274.31Show/hide
Query:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIE---NGDSAA
        MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M DN+ RNVGLIRELNNNIRRVVDLYA LS S TKS+E    G+SAA
Subjt:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIE---NGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

A0A6J1KJ14 protein ELF4-LIKE 3-like1.7e-3274.31Show/hide
Query:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIE---NGDSAA
        MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M DN+ RNVGLIRELNNNIRRVVDLYA LS S TKS+E    G+SAA
Subjt:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIE---NGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 42.0e-1445.05Show/hide
Query:  ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG
        E   +GE D  M +   +NF QVQ++L++NR LI ++N N +SRMADN+ +NV LI+ELN NI +VV++Y+DL+TS +     G +    G
Subjt:  ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG

O80877 Protein ELF4-LIKE 16.8e-1040.96Show/hide
Query:  DGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG
        D ++       F + Q  L+QNR LI  +N+N  SR+ DNV RNVGLI E+N NI +V+++Y+DLS +  K  +      K G
Subjt:  DGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG

Q570U6 Protein ELF4-LIKE 48.3e-2459.18Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG
        MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+  DN+GRNVGLI+ELNNNIRRV  LY DLS S  +S++        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG

Q8S8F5 Protein ELF4-LIKE 31.0e-2660.19Show/hide
Query:  MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIE---NGDSAAK
        MEG+T+SR      ++DGK++Q F+K+FVQVQNIL+ NR+LINEINQN ES++ DN+GRNVGLIRELNNN+RRV  LY DLS + +KS+E    GDS+  
Subjt:  MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIE---NGDSAAK

Query:  PGYKRNRP
         G +R RP
Subjt:  PGYKRNRP

Q94BS8 Protein ELF4-LIKE 21.1e-2359.18Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG
        MEG+  S    R ++DGK++Q FQK+FVQVQ+IL+QNR+LINEINQN ES+ AD++GRNVGLIRELNNNIR V  LY DLS S  +S++        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 45.9e-2559.18Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG
        MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+  DN+GRNVGLI+ELNNNIRRV  LY DLS S  +S++        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG

AT1G17455.2 ELF4-like 45.9e-2559.18Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG
        MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+  DN+GRNVGLI+ELNNNIRRV  LY DLS S  +S++        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG

AT1G72630.1 ELF4-like 27.7e-2559.18Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG
        MEG+  S    R ++DGK++Q FQK+FVQVQ+IL+QNR+LINEINQN ES+ AD++GRNVGLIRELNNNIR V  LY DLS S  +S++        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG

AT2G06255.1 ELF4-like 37.4e-2860.19Show/hide
Query:  MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIE---NGDSAAK
        MEG+T+SR      ++DGK++Q F+K+FVQVQNIL+ NR+LINEINQN ES++ DN+GRNVGLIRELNNN+RRV  LY DLS + +KS+E    GDS+  
Subjt:  MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIE---NGDSAAK

Query:  PGYKRNRP
         G +R RP
Subjt:  PGYKRNRP

AT2G40080.1 Protein of unknown function (DUF1313)1.5e-1545.05Show/hide
Query:  ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG
        E   +GE D  M +   +NF QVQ++L++NR LI ++N N +SRMADN+ +NV LI+ELN NI +VV++Y+DL+TS +     G +    G
Subjt:  ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTACAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGGATGTTGAT
CAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGATAATGTGGGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATG
CCGATCTCTCCACTTCCATCACCAAATCTATCGAAAATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTACAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGGATGTTGAT
CAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGATAATGTGGGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATG
CCGATCTCTCCACTTCCATCACCAAATCTATCGAAAATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG
Protein sequenceShow/hide protein sequence
MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMADNVGRNVGLIRELNNNIRRVVDLYADLSTSITKSIENGDSAAKPGYKRNRP