; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021459 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021459
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReplication protein A 32 kDa subunit B
Genome locationchr02:21617867..21618436
RNA-Seq ExpressionPI0021459
SyntenyPI0021459
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058272.1 hypothetical protein E6C27_scaffold274G005980 [Cucumis melo var. makuwa]1.1e-9095.81Show/hide
Query:  MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI
        MAAKDHTLHRLSEKPFSLLQANQ FVHKILSRNSSFGRSARLPACGLPGQIPFNWE QPGLPKNQPSE PPPAELPPPSSSA GLSKTPHVVPKQAPVKI
Subjt:  MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI

Query:  WFWNKQRRKSRRAVKKNGAFG-SSSPRRHVDRESEFCRRKSNDES-SSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF
        WFWNKQRRKSRRAVKKNGA G SSSPRRHVDRESEFCRRKSNDES SSSSLSCISYSLSSNSSSASSS+RYNNRRRSKLGSLAKEFIRWAF
Subjt:  WFWNKQRRKSRRAVKKNGAFG-SSSPRRHVDRESEFCRRKSNDES-SSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF

KAG6589705.1 Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia]7.2e-5072.28Show/hide
Query:  DHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVP-KQAPVKIWFW
        +H LH LSE PFSLLQAN+LFVHKILSRNSS GRSARLPAC LPGQIPF WEAQPGLPK++PSEN  P   PP  +S  G SKTPH VP +Q   KIWFW
Subjt:  DHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVP-KQAPVKIWFW

Query:  NKQRRKSRRAVKKNGAFG-SSSPRRHVDRESEFCRRKSNDESSSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIR
         K R+K R  VKKNGAFG SSS RRHV++ESEF  RKSNDE SSSSLSCIS+SL   SSS+SSSN Y  RRRSKL SLAK F+R
Subjt:  NKQRRKSRRAVKKNGAFG-SSSPRRHVDRESEFCRRKSNDESSSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIR

KGN65459.1 hypothetical protein Csa_020126 [Cucumis sativus]1.4e-9093.68Show/hide
Query:  MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI
        MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQ+PFNWEAQPGLPKNQPS+NPPP +LPPPSSSALGLSKTPHVVPKQAPVKI
Subjt:  MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI

Query:  WFWNKQRRKSRRAVKKNGAFGSSSPRRHVDRESEFCRRKSNDE-SSSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF
        WFWNKQRRKSRRAVKK+GA GSSSPRRHVDR+SEFCR+KSNDE SSSSSLSCISYS+SSNSSSASSS+RYNNRRR KLGSLAKEFIRWAF
Subjt:  WFWNKQRRKSRRAVKKNGAFGSSSPRRHVDRESEFCRRKSNDE-SSSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF

TYK11824.1 hypothetical protein E5676_scaffold152G00370 [Cucumis melo var. makuwa]7.1e-9095.29Show/hide
Query:  MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI
        MAAKDHTLHRLSEKPFSLLQANQ FVHKILSRNSSFGRSARLPACGLPGQIPFNWE QPGLPKNQPSE PPPAELPPPSSSA GLSKTPHVVPKQAPVKI
Subjt:  MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI

Query:  WFWNKQRRKSRRAVKKNGAFG-SSSPRRHVDRESEFCRRKSNDES-SSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF
        WFWNKQRRKSRRAVKKNGA G SSSPRRHVDRESEFCRRKSND S SSSSLSCISYSLSSNSSSASSS+RYNNRRRSKLGSLAKEFIRWAF
Subjt:  WFWNKQRRKSRRAVKKNGAFG-SSSPRRHVDRESEFCRRKSNDES-SSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF

XP_022987494.1 uncharacterized protein LOC111485037 [Cucurbita maxima]4.5e-5271.73Show/hide
Query:  DHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPK-QAPVKIWFW
        DH LH  SE PFSLLQAN+LFVHKILSRNSS GRSARLPAC LPGQIPF WEAQPGLPK++PSEN  P   PPP +   G SKTPH VPK Q   KIW W
Subjt:  DHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPK-QAPVKIWFW

Query:  NKQRRKSRRAVKKNGAFGSSSPRR-HVDRESEFCRRKSNDESSS----SSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF
         K R+K R  VKKNGAFGSSS  R HV++ESEFC RKSNDESSS    SSLSCIS+SL   SSS+SSSN Y  RRRSKL SLAK F+RWAF
Subjt:  NKQRRKSRRAVKKNGAFGSSSPRR-HVDRESEFCRRKSNDESSS----SSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF

TrEMBL top hitse value%identityAlignment
A0A0A0LWV3 Uncharacterized protein6.9e-9193.68Show/hide
Query:  MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI
        MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQ+PFNWEAQPGLPKNQPS+NPPP +LPPPSSSALGLSKTPHVVPKQAPVKI
Subjt:  MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI

Query:  WFWNKQRRKSRRAVKKNGAFGSSSPRRHVDRESEFCRRKSNDE-SSSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF
        WFWNKQRRKSRRAVKK+GA GSSSPRRHVDR+SEFCR+KSNDE SSSSSLSCISYS+SSNSSSASSS+RYNNRRR KLGSLAKEFIRWAF
Subjt:  WFWNKQRRKSRRAVKKNGAFGSSSPRRHVDRESEFCRRKSNDE-SSSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF

A0A5A7UQX0 Uncharacterized protein5.3e-9195.81Show/hide
Query:  MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI
        MAAKDHTLHRLSEKPFSLLQANQ FVHKILSRNSSFGRSARLPACGLPGQIPFNWE QPGLPKNQPSE PPPAELPPPSSSA GLSKTPHVVPKQAPVKI
Subjt:  MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI

Query:  WFWNKQRRKSRRAVKKNGAFG-SSSPRRHVDRESEFCRRKSNDES-SSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF
        WFWNKQRRKSRRAVKKNGA G SSSPRRHVDRESEFCRRKSNDES SSSSLSCISYSLSSNSSSASSS+RYNNRRRSKLGSLAKEFIRWAF
Subjt:  WFWNKQRRKSRRAVKKNGAFG-SSSPRRHVDRESEFCRRKSNDES-SSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF

A0A5D3CKX4 Uncharacterized protein3.4e-9095.29Show/hide
Query:  MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI
        MAAKDHTLHRLSEKPFSLLQANQ FVHKILSRNSSFGRSARLPACGLPGQIPFNWE QPGLPKNQPSE PPPAELPPPSSSA GLSKTPHVVPKQAPVKI
Subjt:  MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI

Query:  WFWNKQRRKSRRAVKKNGAFG-SSSPRRHVDRESEFCRRKSNDES-SSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF
        WFWNKQRRKSRRAVKKNGA G SSSPRRHVDRESEFCRRKSND S SSSSLSCISYSLSSNSSSASSS+RYNNRRRSKLGSLAKEFIRWAF
Subjt:  WFWNKQRRKSRRAVKKNGAFG-SSSPRRHVDRESEFCRRKSNDES-SSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF

A0A6J1JJ17 uncharacterized protein LOC1114850372.2e-5271.73Show/hide
Query:  DHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPK-QAPVKIWFW
        DH LH  SE PFSLLQAN+LFVHKILSRNSS GRSARLPAC LPGQIPF WEAQPGLPK++PSEN  P   PPP +   G SKTPH VPK Q   KIW W
Subjt:  DHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPK-QAPVKIWFW

Query:  NKQRRKSRRAVKKNGAFGSSSPRR-HVDRESEFCRRKSNDESSS----SSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF
         K R+K R  VKKNGAFGSSS  R HV++ESEFC RKSNDESSS    SSLSCIS+SL   SSS+SSSN Y  RRRSKL SLAK F+RWAF
Subjt:  NKQRRKSRRAVKKNGAFGSSSPRR-HVDRESEFCRRKSNDESSS----SSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF

M5XWN9 Uncharacterized protein4.2e-1134.63Show/hide
Query:  KPFSLLQANQLFVHKILSRNSSFG-RSARLPACGLPGQIPFNWEAQPGLPKNQPS------------ENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI
        K  ++  A++ F +KILSRNSS G  S+R    G+ G +PF WEA+PG PK +              +NPP    PPP++ +L ++  P+     +  ++
Subjt:  KPFSLLQANQLFVHKILSRNSSFG-RSARLPACGLPGQIPFNWEAQPGLPKNQPS------------ENPPPAELPPPSSSALGLSKTPHVVPKQAPVKI

Query:  WFW------NKQRRKSRRAVKKNG-AFGSSSPRRHVDRESEFCR-----RKSNDESSSSSLSCISYSLSSNS----SSASSSNRYNNRRRSKLGSLAKEF
        W W      +K +RK ++  K NG A    +    +  +++ C+      K     SSSS SC S SLSS +    SS+SSS    N + SK+  LA+ F
Subjt:  WFW------NKQRRKSRRAVKKNG-AFGSSSPRRHVDRESEFCR-----RKSNDESSSSSLSCISYSLSSNS----SSASSSNRYNNRRRSKLGSLAKEF

Query:  IRWAF
        IRWAF
Subjt:  IRWAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAAAAGATCACACTCTTCATCGTCTCTCTGAAAAACCCTTTTCATTACTTCAAGCAAATCAATTATTTGTCCACAAAATCCTTTCTAGAAACTCCTCATTTGG
CCGCTCTGCCCGTCTCCCTGCCTGTGGCCTCCCCGGTCAAATCCCTTTCAATTGGGAAGCCCAGCCCGGCCTGCCCAAAAACCAACCTTCTGAAAATCCCCCGCCGGCCG
AACTCCCGCCGCCGTCATCCTCCGCCTTGGGCCTCTCCAAAACTCCTCACGTAGTCCCTAAGCAAGCGCCTGTTAAGATTTGGTTTTGGAATAAACAGAGGAGAAAATCG
AGGCGTGCGGTTAAGAAAAACGGTGCTTTTGGATCGTCCTCACCGAGACGACACGTCGATCGTGAGAGTGAGTTTTGTAGAAGAAAATCAAACGACGAGTCGTCGTCGTC
GTCTTTGTCATGTATTTCTTATTCGTTGTCTTCGAATTCTTCTTCGGCTTCGTCGTCAAATCGTTACAACAACCGACGGCGCTCTAAACTTGGTAGCCTTGCTAAAGAGT
TCATAAGGTGGGCCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCAAAAGATCACACTCTTCATCGTCTCTCTGAAAAACCCTTTTCATTACTTCAAGCAAATCAATTATTTGTCCACAAAATCCTTTCTAGAAACTCCTCATTTGG
CCGCTCTGCCCGTCTCCCTGCCTGTGGCCTCCCCGGTCAAATCCCTTTCAATTGGGAAGCCCAGCCCGGCCTGCCCAAAAACCAACCTTCTGAAAATCCCCCGCCGGCCG
AACTCCCGCCGCCGTCATCCTCCGCCTTGGGCCTCTCCAAAACTCCTCACGTAGTCCCTAAGCAAGCGCCTGTTAAGATTTGGTTTTGGAATAAACAGAGGAGAAAATCG
AGGCGTGCGGTTAAGAAAAACGGTGCTTTTGGATCGTCCTCACCGAGACGACACGTCGATCGTGAGAGTGAGTTTTGTAGAAGAAAATCAAACGACGAGTCGTCGTCGTC
GTCTTTGTCATGTATTTCTTATTCGTTGTCTTCGAATTCTTCTTCGGCTTCGTCGTCAAATCGTTACAACAACCGACGGCGCTCTAAACTTGGTAGCCTTGCTAAAGAGT
TCATAAGGTGGGCCTTTTAA
Protein sequenceShow/hide protein sequence
MAAKDHTLHRLSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQIPFNWEAQPGLPKNQPSENPPPAELPPPSSSALGLSKTPHVVPKQAPVKIWFWNKQRRKS
RRAVKKNGAFGSSSPRRHVDRESEFCRRKSNDESSSSSLSCISYSLSSNSSSASSSNRYNNRRRSKLGSLAKEFIRWAF