; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021460 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021460
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr01:13169027..13169656
RNA-Seq ExpressionPI0021460
SyntenyPI0021460
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043403.1 hypothetical protein E6C27_scaffold1639G00020 [Cucumis melo var. makuwa]1.4e-7071.77Show/hide
Query:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT
        M V  KD+G  +P  KG   PK PL+KV STHA LK SE PLD S +QI   PE SQW+GEKVVSNFF+KTTLCMW+DIQ+KI++TPFEYIPRLRPEIAT
Subjt:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT

Query:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE
        VL  I KIHAD L+PLEE LNSYLKR+DNFNDVQSSY  QLL  DK R LDEKTS I+E LTLM+QLR DAKVIQ+R  +LSLE KEL+ RL+SIN ES+
Subjt:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE

Query:  QLSILSCEK
        QLSILSCEK
Subjt:  QLSILSCEK

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]1.6e-7174.16Show/hide
Query:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT
        M V  KD+   NP SK    PK  L+KV S HA LK SE PLD S KQ + +PEPSQWVGEKVVSNFFQKT LCMWEDIQ+KIMRTPFEYIPRLRPEI T
Subjt:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT

Query:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE
        VL GI KIHAD LT LEE LNSYLKRVDNFNDVQSSY  QL  TDK R L+EKTS IKE LTL+ QLR DAKVIQ+R  +LSLE KELE RL+SIN ESE
Subjt:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE

Query:  QLSILSCEK
        QLSILSCEK
Subjt:  QLSILSCEK

KAA0060431.1 hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa]7.9e-7474.29Show/hide
Query:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT
        M V  K +G  +P SKG   PK PL+KV STHA LK SE PLD S + I   PEPSQWVGEKVV NFF+KT LCMWEDIQ+KIMRTPFEYIPRLRPEIAT
Subjt:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT

Query:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE
        VL GI KIH + LTPLEE LNSYLKRVDNFNDVQSSY  QLL TDK R LDEKTS I+E LTLM++LREDA VIQ+RA QLSLE KELE RL+S+N ESE
Subjt:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE

Query:  QLSILSCEKM
        QLSILSCEK+
Subjt:  QLSILSCEKM

KAA0061097.1 hypothetical protein E6C27_scaffold348G00060 [Cucumis melo var. makuwa]2.8e-7174.16Show/hide
Query:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT
        M V EKD+   +PLSK    PK  L+KV S HA LK SE PL  S K+   +PEPSQWVGEKVVSNFFQKT LCMWEDIQ+KIMRT FEYIPRLRPEIAT
Subjt:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT

Query:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE
        VL GI KIHAD LT LEE LNSYLKRVDNFNDVQSSY  QLL TDK R L+EKTS IKE LTL+ QLR DAKVIQ+R  +LSLE KELE RL+SIN ESE
Subjt:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE

Query:  QLSILSCEK
        QLSILSCEK
Subjt:  QLSILSCEK

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]2.8e-7174.16Show/hide
Query:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT
        M V EKD+   +PLSK    PK  L+KV S HA LK SE PL  S K+   +PEPSQWVGEKVVSNFFQKT LCMWEDIQ+KIMRT FEYIPRLRPEIAT
Subjt:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT

Query:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE
        VL GI KIHAD LT LEE LNSYLKRVDNFNDVQSSY  QLL TDK R L+EKTS IKE LTL+ QLR DAKVIQ+R  +LSLE KELE RL+SIN ESE
Subjt:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE

Query:  QLSILSCEK
        QLSILSCEK
Subjt:  QLSILSCEK

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein6.7e-7172.99Show/hide
Query:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT
        M V  KD+   +P SK    PK  L+KV S HA L  SE PL  S KQ + +PEPSQWVGEKVVSNFFQKT LCMWEDIQ+KIMRTPFEYIPRLRPEIAT
Subjt:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT

Query:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE
        VL GI KIHAD LT LEE LNSYLKRVDNFNDVQSSY  QL  TDK R L+EKTS IKETLTL+ QLR DAKVIQ+R  +LSLE KELE RL+SIN ESE
Subjt:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE

Query:  QLSILSCEKMR
        QLSILSCEK +
Subjt:  QLSILSCEKMR

A0A5A7TX42 Uncharacterized protein8.0e-7274.16Show/hide
Query:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT
        M V  KD+   NP SK    PK  L+KV S HA LK SE PLD S KQ + +PEPSQWVGEKVVSNFFQKT LCMWEDIQ+KIMRTPFEYIPRLRPEI T
Subjt:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT

Query:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE
        VL GI KIHAD LT LEE LNSYLKRVDNFNDVQSSY  QL  TDK R L+EKTS IKE LTL+ QLR DAKVIQ+R  +LSLE KELE RL+SIN ESE
Subjt:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE

Query:  QLSILSCEK
        QLSILSCEK
Subjt:  QLSILSCEK

A0A5A7V2J6 Uncharacterized protein1.4e-7174.16Show/hide
Query:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT
        M V EKD+   +PLSK    PK  L+KV S HA LK SE PL  S K+   +PEPSQWVGEKVVSNFFQKT LCMWEDIQ+KIMRT FEYIPRLRPEIAT
Subjt:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT

Query:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE
        VL GI KIHAD LT LEE LNSYLKRVDNFNDVQSSY  QLL TDK R L+EKTS IKE LTL+ QLR DAKVIQ+R  +LSLE KELE RL+SIN ESE
Subjt:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE

Query:  QLSILSCEK
        QLSILSCEK
Subjt:  QLSILSCEK

A0A5A7V3X5 PMD domain-containing protein3.8e-7474.29Show/hide
Query:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT
        M V  K +G  +P SKG   PK PL+KV STHA LK SE PLD S + I   PEPSQWVGEKVV NFF+KT LCMWEDIQ+KIMRTPFEYIPRLRPEIAT
Subjt:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT

Query:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE
        VL GI KIH + LTPLEE LNSYLKRVDNFNDVQSSY  QLL TDK R LDEKTS I+E LTLM++LREDA VIQ+RA QLSLE KELE RL+S+N ESE
Subjt:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE

Query:  QLSILSCEKM
        QLSILSCEK+
Subjt:  QLSILSCEKM

A0A5D3BW91 Uncharacterized protein1.4e-7174.16Show/hide
Query:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT
        M V EKD+   +PLSK    PK  L+KV S HA LK SE PL  S K+   +PEPSQWVGEKVVSNFFQKT LCMWEDIQ+KIMRT FEYIPRLRPEIAT
Subjt:  MKVNEKDVGKSNPLSKG---PKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIAT

Query:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE
        VL GI KIHAD LT LEE LNSYLKRVDNFNDVQSSY  QLL TDK R L+EKTS IKE LTL+ QLR DAKVIQ+R  +LSLE KELE RL+SIN ESE
Subjt:  VLLGIAKIHADNLTPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESE

Query:  QLSILSCEK
        QLSILSCEK
Subjt:  QLSILSCEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGAATGAAAAAGATGTTGGAAAATCAAATCCTTTGTCCAAAGGACCCAAAACGCCTTTAGAGAAGGTCAAATCCACGCATGCGTCTCTCAAGATTTCCGAGCC
GCCTTTAGACACTTCGAGAAAGCAGATAGTAGGACATCCTGAGCCCTCTCAGTGGGTTGGTGAAAAGGTAGTGTCAAACTTCTTTCAGAAAACGACCTTATGCATGTGGG
AGGACATTCAAAACAAGATCATGCGCACTCCTTTTGAATATATCCCAAGACTTAGGCCAGAAATAGCAACGGTCCTTTTAGGAATTGCAAAGATCCATGCAGACAACCTG
ACTCCTCTTGAAGAAAATTTGAATAGCTACCTTAAGAGGGTAGACAACTTCAATGATGTACAATCTTCATATTTCACACAACTGTTGTTGACGGATAAAACTCGTCCATT
GGACGAGAAGACATCTGTCATCAAAGAAACCTTGACTTTGATGGACCAACTACGAGAAGATGCCAAAGTTATTCAGAAGAGGGCTACGCAATTATCCTTGGAAAATAAAG
AACTGGAGAGCAGACTTGAGAGTATAAATACTGAGTCTGAACAACTATCCATCTTATCTTGTGAGAAAATGAGGCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGAATGAAAAAGATGTTGGAAAATCAAATCCTTTGTCCAAAGGACCCAAAACGCCTTTAGAGAAGGTCAAATCCACGCATGCGTCTCTCAAGATTTCCGAGCC
GCCTTTAGACACTTCGAGAAAGCAGATAGTAGGACATCCTGAGCCCTCTCAGTGGGTTGGTGAAAAGGTAGTGTCAAACTTCTTTCAGAAAACGACCTTATGCATGTGGG
AGGACATTCAAAACAAGATCATGCGCACTCCTTTTGAATATATCCCAAGACTTAGGCCAGAAATAGCAACGGTCCTTTTAGGAATTGCAAAGATCCATGCAGACAACCTG
ACTCCTCTTGAAGAAAATTTGAATAGCTACCTTAAGAGGGTAGACAACTTCAATGATGTACAATCTTCATATTTCACACAACTGTTGTTGACGGATAAAACTCGTCCATT
GGACGAGAAGACATCTGTCATCAAAGAAACCTTGACTTTGATGGACCAACTACGAGAAGATGCCAAAGTTATTCAGAAGAGGGCTACGCAATTATCCTTGGAAAATAAAG
AACTGGAGAGCAGACTTGAGAGTATAAATACTGAGTCTGAACAACTATCCATCTTATCTTGTGAGAAAATGAGGCCATAG
Protein sequenceShow/hide protein sequence
MKVNEKDVGKSNPLSKGPKTPLEKVKSTHASLKISEPPLDTSRKQIVGHPEPSQWVGEKVVSNFFQKTTLCMWEDIQNKIMRTPFEYIPRLRPEIATVLLGIAKIHADNL
TPLEENLNSYLKRVDNFNDVQSSYFTQLLLTDKTRPLDEKTSVIKETLTLMDQLREDAKVIQKRATQLSLENKELESRLESINTESEQLSILSCEKMRP