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PI0021470 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021470
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionserine/arginine repetitive matrix protein 1-like
Genome locationchr12:3668961..3669713
RNA-Seq ExpressionPI0021470
SyntenyPI0021470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055390.1 uncharacterized protein E6C27_scaffold80G002350 [Cucumis melo var. makuwa]2.5e-6671.98Show/hide
Query:  MTEIRGLMSPRRSR-RAGEENKKTAAPPDPEEQQQRQRRNDTQKATSLRQRDNLSPSVYSDICFTKPDLKIIATSCRQRKQPPNPDTKTETPT-TTSLLP
        M EIRG+M PR S      +  +T APPDPEE QQRQR NDT+ ATSL+QR++LS S  S ICF +PDLKII TS  Q KQPPNPD K +TPT TTS  P
Subjt:  MTEIRGLMSPRRSR-RAGEENKKTAAPPDPEEQQQRQRRNDTQKATSLRQRDNLSPSVYSDICFTKPDLKIIATSCRQRKQPPNPDTKTETPT-TTSLLP

Query:  SISNFKAGFNKFTKHVDSPNGSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQF
        S SN KAG N  TKHV SPNGSP Q FGSSQS APIILHKIY+EIA HRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAI MLSEHMEREK++  
Subjt:  SISNFKAGFNKFTKHVDSPNGSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQF

Query:  LVGLNDS
        +   NDS
Subjt:  LVGLNDS

TYJ99320.1 hypothetical protein E5676_scaffold248G005340 [Cucumis melo var. makuwa]4.8e-9478.17Show/hide
Query:  MTEIRGLMSPRRSR-RAGEENKKTAAPPDPEEQQQRQRRNDTQKATSLRQRDNLSPSVYSDICFTKPDLKIIATSCRQRKQPPNPDTKTETPT-TTSLLP
        M EIRG+M PR S      +  +T APPDPEE QQRQR NDT+ ATSL+QR++LS S  S ICF +PDLKII TS  Q KQPPNPDTK +TPT TTS  P
Subjt:  MTEIRGLMSPRRSR-RAGEENKKTAAPPDPEEQQQRQRRNDTQKATSLRQRDNLSPSVYSDICFTKPDLKIIATSCRQRKQPPNPDTKTETPT-TTSLLP

Query:  SISNFKAGFNKFTKHVDSPNGSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQF
        S SN KAG N  TKHV SPNGSP Q FGSSQS APIILHKIY+EIA HRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAI MLSEHMEREKVIQF
Subjt:  SISNFKAGFNKFTKHVDSPNGSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQF

Query:  LVGLNDSYSSTCSKILFMRPFPTVDMAFSKVIRKENRRKLVVLSQYDVEEND
        LVGLNDSYSSTCSKILFMRPFPTVD AFS +IRKENRRKLV LSQY+ EEND
Subjt:  LVGLNDSYSSTCSKILFMRPFPTVDMAFSKVIRKENRRKLVVLSQYDVEEND

XP_038895285.1 GATA zinc finger domain-containing protein 11-like isoform X1 [Benincasa hispida]1.9e-2659.02Show/hide
Query:  GSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRP
        GS  +   SSQS     + +IYKEIA HRQ NSSITSYFTKL+ LWD+LA    DL       A E LSE+MEREKV+QFLVGLNDSYS  C++IL   P
Subjt:  GSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRP

Query:  FPTVDMAFSKVIRKENRRKLVV
        FPT++ A+S VIR+E  R+LVV
Subjt:  FPTVDMAFSKVIRKENRRKLVV

XP_038895286.1 hybrid signal transduction histidine kinase L-like isoform X2 [Benincasa hispida]1.9e-2659.02Show/hide
Query:  GSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRP
        GS  +   SSQS     + +IYKEIA HRQ NSSITSYFTKL+ LWD+LA    DL       A E LSE+MEREKV+QFLVGLNDSYS  C++IL   P
Subjt:  GSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRP

Query:  FPTVDMAFSKVIRKENRRKLVV
        FPT++ A+S VIR+E  R+LVV
Subjt:  FPTVDMAFSKVIRKENRRKLVV

XP_038895287.1 hybrid signal transduction histidine kinase L-like isoform X3 [Benincasa hispida]1.9e-2659.02Show/hide
Query:  GSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRP
        GS  +   SSQS     + +IYKEIA HRQ NSSITSYFTKL+ LWD+LA    DL       A E LSE+MEREKV+QFLVGLNDSYS  C++IL   P
Subjt:  GSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRP

Query:  FPTVDMAFSKVIRKENRRKLVV
        FPT++ A+S VIR+E  R+LVV
Subjt:  FPTVDMAFSKVIRKENRRKLVV

TrEMBL top hitse value%identityAlignment
A0A5A7UJM8 Uncharacterized protein1.2e-6671.98Show/hide
Query:  MTEIRGLMSPRRSR-RAGEENKKTAAPPDPEEQQQRQRRNDTQKATSLRQRDNLSPSVYSDICFTKPDLKIIATSCRQRKQPPNPDTKTETPT-TTSLLP
        M EIRG+M PR S      +  +T APPDPEE QQRQR NDT+ ATSL+QR++LS S  S ICF +PDLKII TS  Q KQPPNPD K +TPT TTS  P
Subjt:  MTEIRGLMSPRRSR-RAGEENKKTAAPPDPEEQQQRQRRNDTQKATSLRQRDNLSPSVYSDICFTKPDLKIIATSCRQRKQPPNPDTKTETPT-TTSLLP

Query:  SISNFKAGFNKFTKHVDSPNGSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQF
        S SN KAG N  TKHV SPNGSP Q FGSSQS APIILHKIY+EIA HRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAI MLSEHMEREK++  
Subjt:  SISNFKAGFNKFTKHVDSPNGSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQF

Query:  LVGLNDS
        +   NDS
Subjt:  LVGLNDS

A0A5D3BHR0 Uncharacterized protein2.3e-9478.17Show/hide
Query:  MTEIRGLMSPRRSR-RAGEENKKTAAPPDPEEQQQRQRRNDTQKATSLRQRDNLSPSVYSDICFTKPDLKIIATSCRQRKQPPNPDTKTETPT-TTSLLP
        M EIRG+M PR S      +  +T APPDPEE QQRQR NDT+ ATSL+QR++LS S  S ICF +PDLKII TS  Q KQPPNPDTK +TPT TTS  P
Subjt:  MTEIRGLMSPRRSR-RAGEENKKTAAPPDPEEQQQRQRRNDTQKATSLRQRDNLSPSVYSDICFTKPDLKIIATSCRQRKQPPNPDTKTETPT-TTSLLP

Query:  SISNFKAGFNKFTKHVDSPNGSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQF
        S SN KAG N  TKHV SPNGSP Q FGSSQS APIILHKIY+EIA HRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAI MLSEHMEREKVIQF
Subjt:  SISNFKAGFNKFTKHVDSPNGSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQF

Query:  LVGLNDSYSSTCSKILFMRPFPTVDMAFSKVIRKENRRKLVVLSQYDVEEND
        LVGLNDSYSSTCSKILFMRPFPTVD AFS +IRKENRRKLV LSQY+ EEND
Subjt:  LVGLNDSYSSTCSKILFMRPFPTVDMAFSKVIRKENRRKLVVLSQYDVEEND

A0A6J1C5Z8 uncharacterized protein LOC1110085884.6e-2660.53Show/hide
Query:  SSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQ-YSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDMA
        S QS AP I  +IYK+IASHRQ NSS+TSYFTKLK LWD+L + Y+D  PQ  S  A+E LS H+EREKV+QFL+GLN+SYS+ C +IL ++PFPT++ A
Subjt:  SSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQ-YSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDMA

Query:  FSKVIRKENRRKLV
        +S +IR+E R +LV
Subjt:  FSKVIRKENRRKLV

A0A6J1C6T8 uncharacterized protein LOC111008934 isoform X22.7e-2664.22Show/hide
Query:  SSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDMAF
        SSQS  P I  +IYK+IASHRQGNSSITSYFT+LK LWD+L + YNDL+   SS       EH+EREKV+QFLVGLND YS+ C +IL +RPFPTV+ A+
Subjt:  SSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDMAF

Query:  SKVIRKENR
        S VIR+E R
Subjt:  SKVIRKENR

A0A6J1C6U3 uncharacterized protein LOC111008934 isoform X12.7e-2664.22Show/hide
Query:  SSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDMAF
        SSQS  P I  +IYK+IASHRQGNSSITSYFT+LK LWD+L + YNDL+   SS       EH+EREKV+QFLVGLND YS+ C +IL +RPFPTV+ A+
Subjt:  SSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDMAF

Query:  SKVIRKENR
        S VIR+E R
Subjt:  SKVIRKENR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1.4e-0627.93Show/hide
Query:  LHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAP-------QYSSDAIEMLSEHMEREKVIQFLVG--LNDSYSSTCSKILFMRPFPTVDMAF
        ++++ + +A+ RQG  S+  YF KL ++W +L    ++ AP         + +  +   E  E+E+  +FL+G  LN  + +  +KI+F +P P++  AF
Subjt:  LHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAP-------QYSSDAIEMLSEHMEREKVIQFLVG--LNDSYSSTCSKILFMRPFPTVDMAF

Query:  SKVIRKENRRK
        + V   E+  K
Subjt:  SKVIRKENRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGAAATAAGAGGACTAATGAGTCCCCGAAGATCCCGAAGGGCCGGGGAGGAAAATAAGAAGACAGCAGCGCCACCCGATCCCGAGGAGCAACAACAGCGTCAAAG
AAGAAACGACACCCAAAAAGCCACCAGCTTAAGACAAAGAGACAACCTTAGTCCTTCAGTTTATTCAGATATCTGCTTCACAAAACCCGATTTAAAGATCATCGCAACTT
CATGCCGACAAAGAAAACAGCCCCCAAATCCAGACACTAAAACTGAAACCCCCACAACAACTTCACTTCTCCCTTCAATAAGCAATTTTAAAGCTGGGTTCAATAAGTTT
ACTAAACATGTTGATTCTCCAAATGGTTCTCCCAACCAAGGATTTGGTTCTTCTCAAAGCAAGGCTCCAATTATATTACATAAAATTTATAAGGAAATTGCATCTCACCG
TCAAGGTAACTCATCTATTACTTCTTACTTCACAAAGCTCAAGGAATTATGGGATCAACTTGCAAAAGCCTACAATGATTTGGCGCCTCAATATTCATCTGATGCAATTG
AGATGCTGAGTGAGCATATGGAAAGGGAAAAAGTAATCCAATTTCTTGTTGGATTAAATGATTCTTATTCCTCCACCTGCTCTAAAATACTTTTTATGAGGCCATTTCCT
ACCGTGGATATGGCCTTTTCTAAAGTCATCCGAAAAGAAAACCGTAGGAAATTGGTAGTTTTGTCACAATATGATGTTGAGGAAAATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGGAAATAAGAGGACTAATGAGTCCCCGAAGATCCCGAAGGGCCGGGGAGGAAAATAAGAAGACAGCAGCGCCACCCGATCCCGAGGAGCAACAACAGCGTCAAAG
AAGAAACGACACCCAAAAAGCCACCAGCTTAAGACAAAGAGACAACCTTAGTCCTTCAGTTTATTCAGATATCTGCTTCACAAAACCCGATTTAAAGATCATCGCAACTT
CATGCCGACAAAGAAAACAGCCCCCAAATCCAGACACTAAAACTGAAACCCCCACAACAACTTCACTTCTCCCTTCAATAAGCAATTTTAAAGCTGGGTTCAATAAGTTT
ACTAAACATGTTGATTCTCCAAATGGTTCTCCCAACCAAGGATTTGGTTCTTCTCAAAGCAAGGCTCCAATTATATTACATAAAATTTATAAGGAAATTGCATCTCACCG
TCAAGGTAACTCATCTATTACTTCTTACTTCACAAAGCTCAAGGAATTATGGGATCAACTTGCAAAAGCCTACAATGATTTGGCGCCTCAATATTCATCTGATGCAATTG
AGATGCTGAGTGAGCATATGGAAAGGGAAAAAGTAATCCAATTTCTTGTTGGATTAAATGATTCTTATTCCTCCACCTGCTCTAAAATACTTTTTATGAGGCCATTTCCT
ACCGTGGATATGGCCTTTTCTAAAGTCATCCGAAAAGAAAACCGTAGGAAATTGGTAGTTTTGTCACAATATGATGTTGAGGAAAATGATTAG
Protein sequenceShow/hide protein sequence
MTEIRGLMSPRRSRRAGEENKKTAAPPDPEEQQQRQRRNDTQKATSLRQRDNLSPSVYSDICFTKPDLKIIATSCRQRKQPPNPDTKTETPTTTSLLPSISNFKAGFNKF
TKHVDSPNGSPNQGFGSSQSKAPIILHKIYKEIASHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFP
TVDMAFSKVIRKENRRKLVVLSQYDVEEND