CuGenDBv2

Gene ID	PI0021479
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	21.7 kDa class VI heat shock protein
Genome location	chr06:25710818..25714055
RNA-Seq Expression	PI0021479
Synteny	PI0021479
Gene Ontology terms	NA
InterPro domains	IPR002068 - Alpha crystallin/Hsp20 domain IPR008978 - HSP20-like chaperone

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ADU55792.1 HSP23.0 [Citrullus lanatus]

4.7e-92

87.56

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Query:  MATSR-QLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQ
        MATS+ QLEVHKEDH TPSKWSVSLGEEVFR+F+GQANSAVQ VF DGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDW QTDQEY +Q
Subjt:  MATSR-QLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQ

Query:  AELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDED
        AEL EAWRNALQISI EDGKVLEISGQLKEQ REG+T+ DWR VNWWEHGYVRRLELPEDAD SRMEAR+KND VLEIKIPK ETN+G ES S+DNSDED
Subjt:  AELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDED

Query:  A
        A
Subjt:  A

KAG6577438.1 21.7 kDa class VI heat shock protein, partial [Cucurbita argyrosperma subsp. sororia]

3.4e-82

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Query:  MATSR-QLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQ
        MATS+ QLEVHK DH +PSKWSV+LGEEVF RF+GQ NS VQKV  +GSLFSPLLFGKFFDPADAFPLWEFESDLL+S LR SGKSS+DW QTDQEYV+Q
Subjt:  MATSR-QLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQ

Query:  AELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDED
        AELQE WRNALQIS+ EDGKVLEISGQLKEQ RE    VDWRC NWWEHG+VRRLELPED D  R+EAR+KND +LEIKIPKLE+N+G+ESKS+D SD+D
Subjt:  AELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDED

XP_004152915.1 21.7 kDa class VI heat shock protein isoform X1 [Cucumis sativus]

5.9e-103

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Query:  MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQA
        MATS+QLEVHKEDHPTPSKWSVSLGEEVFRRF+GQANSA+QKVF DGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSS+DWSQTDQEYV+QA
Subjt:  MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQA

Query:  ELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDEDA
        EL EAWRNALQISIEEDGKVLEISGQLKEQ REGKT+VDWR V+WWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKS+DNSDEDA
Subjt:  ELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDEDA

XP_008463443.1 PREDICTED: 21.7 kDa class VI heat shock protein [Cucumis melo]

1.4e-99

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Query:  MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQA
        MAT +QLEVHKEDH TPSKWSVSLGEEVFRRF+GQANSA+QKVF DGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSS+DWSQTDQEY++QA
Subjt:  MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQA

Query:  ELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDEDA
        EL EAWRNALQISIEE GKVLEISGQL+EQ REGKT+VDWR VNWWEHG+VRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQ SESKS+DNSDEDA
Subjt:  ELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDEDA

XP_038905887.1 21.7 kDa class VI heat shock protein [Benincasa hispida]

4.0e-91

87.06

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Query:  MATSR-QLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQ
        MATS+ QLEV KEDH TPSKW+V+LGE+VFRRF+GQ+N+AVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLR SGKSS+DW QTDQEYV+Q
Subjt:  MATSR-QLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQ

Query:  AELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDED
        AEL EAWRNALQISI EDGKVLEISGQLKEQ REGKT VDWR VNWWEHGYVRRLELPEDAD SRMEAR+KND VLEIKI K ETNQG ESKS+DNSDED
Subjt:  AELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDED

Query:  A
        A
Subjt:  A

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6D5 SHSP domain-containing protein

2.9e-103

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Query:  MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQA
        MATS+QLEVHKEDHPTPSKWSVSLGEEVFRRF+GQANSA+QKVF DGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSS+DWSQTDQEYV+QA
Subjt:  MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQA

Query:  ELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDEDA
        EL EAWRNALQISIEEDGKVLEISGQLKEQ REGKT+VDWR V+WWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKS+DNSDEDA
Subjt:  ELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDEDA

A0A1S3CJA6 21.7 kDa class VI heat shock protein

6.6e-100

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Query:  MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQA
        MAT +QLEVHKEDH TPSKWSVSLGEEVFRRF+GQANSA+QKVF DGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSS+DWSQTDQEY++QA
Subjt:  MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQA

Query:  ELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDEDA
        EL EAWRNALQISIEE GKVLEISGQL+EQ REGKT+VDWR VNWWEHG+VRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQ SESKS+DNSDEDA
Subjt:  ELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDEDA

A0A5D3C0M7 21.7 kDa class VI heat shock protein

6.6e-100

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Query:  MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQA
        MAT +QLEVHKEDH TPSKWSVSLGEEVFRRF+GQANSA+QKVF DGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSS+DWSQTDQEY++QA
Subjt:  MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQA

Query:  ELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDEDA
        EL EAWRNALQISIEE GKVLEISGQL+EQ REGKT+VDWR VNWWEHG+VRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQ SESKS+DNSDEDA
Subjt:  ELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDEDA

A0A6J1DNR7 21.7 kDa class VI heat shock protein

2.1e-82

78.79

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Query:  MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQA
        MATS+QLEVH+EDH TPSKWSVSLGEE FRRF+GQAN  VQKVF DGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLR SGKS++DW Q DQEYV+QA
Subjt:  MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQA

Query:  ELQEAWRNALQISIEEDGKVLEISGQLK-EQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSD
        EL EA RN +QI I E+GKVLEISGQLK +Q RE KT +DWR VNWWEHGYVRRLELP+DAD  RMEAR+KND+V+E+KIPKLE NQ +ESK++D+ D
Subjt:  ELQEAWRNALQISIEEDGKVLEISGQLK-EQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSD

H6TB45 HSP23.0

2.3e-92

87.56

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Query:  MATSR-QLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQ
        MATS+ QLEVHKEDH TPSKWSVSLGEEVFR+F+GQANSAVQ VF DGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDW QTDQEY +Q
Subjt:  MATSR-QLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQ

Query:  AELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDED
        AEL EAWRNALQISI EDGKVLEISGQLKEQ REG+T+ DWR VNWWEHGYVRRLELPEDAD SRMEAR+KND VLEIKIPK ETN+G ES S+DNSDED
Subjt:  AELQEAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDED

Query:  A
        A
Subjt:  A

SwissProt top hits

e value

%identity

Alignment

Q6AUW3 22.3 kDa class VI heat shock protein

4.2e-35

42.05

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Query:  MATSRQLEVHKE--DHPTPSKWSVSLGEEVFRRF-------IGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQ
        M   R +EV +   D   P +W +SL E  F  F       +    +A + VF +GSLFSP LFGKFFDPADAFPLWEFE ++LL+ LR   +++VDW++
Subjt:  MATSRQLEVHKE--DHPTPSKWSVSLGEEVFRRF-------IGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQ

Query:  TDQEYVVQAELQEAWRNALQISIEEDGKVLEISGQLK----EQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKN-DLVLEIKIPK
        TD EY ++A++    +  +++S ++  +V+++SG  +        +G+   DWR   WWEHG+VRR+ELPEDAD  ++EA   + + +LEIK+PK
Subjt:  TDQEYVVQAELQEAWRNALQISIEEDGKVLEISGQLK----EQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKN-DLVLEIKIPK

Q9FIT9 21.7 kDa class VI heat shock protein

9.3e-51

51.63

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Query:  SRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQAELQ
        S +LE+H +D  TP KWSV LG++VFRRF+     + + VF +GSLFSP LFGK+FDP+DAFPLWEFE+++LL++LR  G+  VDWSQTDQ YV+++++ 
Subjt:  SRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQAELQ

Query:  EAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKND---LVLEIKIPKLET
           +N +Q+ ++ +G+V+EISGQ    +++  T+ DWR   WWEHGYVRRLELP DAD+   EA + N+     LEI+IPK+ +
Subjt:  EAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKND---LVLEIKIPKLET

Arabidopsis top hits

e value

%identity

Alignment

AT5G54660.1 HSP20-like chaperones superfamily protein

6.6e-52

51.63

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Query:  SRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQAELQ
        S +LE+H +D  TP KWSV LG++VFRRF+     + + VF +GSLFSP LFGK+FDP+DAFPLWEFE+++LL++LR  G+  VDWSQTDQ YV+++++ 
Subjt:  SRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQAELQ

Query:  EAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKND---LVLEIKIPKLET
           +N +Q+ ++ +G+V+EISGQ    +++  T+ DWR   WWEHGYVRRLELP DAD+   EA + N+     LEI+IPK+ +
Subjt:  EAWRNALQISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKND---LVLEIKIPKLET

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCACTTCAAGACAACTAGAAGTCCATAAAGAAGATCACCCTACTCCATCAAAATGGAGTGTCTCTCTGGGTGAAGAGGTTTTTAGAAGATTTATAGGGCAAGCTAA
TTCAGCTGTGCAAAAGGTGTTCAGCGATGGCTCGTTGTTTAGCCCGTTGTTGTTCGGAAAGTTCTTCGATCCCGCCGATGCTTTTCCGCTATGGGAGTTTGAGTCTGATC
TATTGTTGTCCAACCTTCGCATCTCTGGAAAATCTTCAGTAGATTGGTCTCAAACCGATCAAGAGTACGTTGTACAAGCAGAATTACAAGAAGCTTGGAGAAATGCATTA
CAAATCTCCATAGAAGAAGATGGGAAGGTGTTAGAGATAAGTGGTCAATTGAAAGAGCAACACAGAGAAGGCAAGACCTCAGTCGATTGGCGATGTGTCAATTGGTGGGA
GCACGGATACGTTCGACGTCTCGAGTTGCCCGAAGATGCTGATTCGTCTAGAATGGAGGCTCGTATCAAGAATGACTTGGTTCTTGAGATCAAAATTCCCAAGTTAGAAA
CCAATCAAGGTAGTGAATCAAAGAGCCAAGATAATTCTGATGAAGATGCTTGA

mRNA sequence

Show/hide mRNA sequence

CTTTGTCTTTACATATGTTATAATATTAATAGAGCTCCAAAACACTTCCAAGTTTCTTCTTGCACCCTAGCCACATACAACTTCCCTCTTCCTTTAGCCATGGCCACTTC
AAGACAACTAGAAGTCCATAAAGAAGATCACCCTACTCCATCAAAATGGAGTGTCTCTCTGGGTGAAGAGGTTTTTAGAAGATTTATAGGGCAAGCTAATTCAGCTGTGC
AAAAGGTGTTCAGCGATGGCTCGTTGTTTAGCCCGTTGTTGTTCGGAAAGTTCTTCGATCCCGCCGATGCTTTTCCGCTATGGGAGTTTGAGTCTGATCTATTGTTGTCC
AACCTTCGCATCTCTGGAAAATCTTCAGTAGATTGGTCTCAAACCGATCAAGAGTACGTTGTACAAGCAGAATTACAAGAAGCTTGGAGAAATGCATTACAAATCTCCAT
AGAAGAAGATGGGAAGGTGTTAGAGATAAGTGGTCAATTGAAAGAGCAACACAGAGAAGGCAAGACCTCAGTCGATTGGCGATGTGTCAATTGGTGGGAGCACGGATACG
TTCGACGTCTCGAGTTGCCCGAAGATGCTGATTCGTCTAGAATGGAGGCTCGTATCAAGAATGACTTGGTTCTTGAGATCAAAATTCCCAAGTTAGAAACCAATCAAGGT
AGTGAATCAAAGAGCCAAGATAATTCTGATGAAGATGCTTGAGTTGTTTGTGAGCAAATTTCTAATGGTAAATGTGTTTAACTTAAACTTAATTTACATATTCTATGTGA
TTGTGACAAAACAACAAGACATGGATCTCAAATATGTGTATGTTGTTGTTATTGCTGACCAACTTATGTGGATGAGAATACAAACACTTTCAAAATGTCTTGTATACAAT
TTTCATTTTCATGATTTT

Protein sequence

Show/hide protein sequence

MATSRQLEVHKEDHPTPSKWSVSLGEEVFRRFIGQANSAVQKVFSDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSVDWSQTDQEYVVQAELQEAWRNAL
QISIEEDGKVLEISGQLKEQHREGKTSVDWRCVNWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSQDNSDEDA

PI0021479 (gene) of Melon (PI 482460) v1 genome