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PI0021508 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021508
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr07:15854432..15856459
RNA-Seq ExpressionPI0021508
SyntenyPI0021508
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]3.5e-1366.13Show/hide
Query:  NNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM
        NN+N P  Q  QE N AY+AHD D PI+SYA+ NLY+FNPGIAY  FGEN  FEIKH+ML M
Subjt:  NNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM

KAA0060833.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]8.6e-2055.45Show/hide
Query:  MSDGEQPQFELDPELERTFRRNRRRARQRQARRMEN-DNNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM
        MS+GEQP+F +D E+ER F+RNRR+ ++RQ     N  NN+ AP  QA+Q  N  Y+AH++D PIRS  + NLY FNPGI YP FGEN RF+IK VML +
Subjt:  MSDGEQPQFELDPELERTFRRNRRRARQRQARRMEN-DNNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM

Query:  I
        +
Subjt:  I

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]5.4e-1464.18Show/hide
Query:  MENDNNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQMI
        M N NN+  P  QA Q  N  Y+A D+D PIRSYA+ NLY+FNPGIAYP F EN RFEIK VMLQ+I
Subjt:  MENDNNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQMI

TYK08803.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]8.6e-2055.45Show/hide
Query:  MSDGEQPQFELDPELERTFRRNRRRARQRQARRMEN-DNNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM
        MS+GEQP+F +D E+ER F+RNRR+ ++RQ     N  NN+ AP  QA+Q  N  Y+AH++D PIRS  + NLY FNPGI YP FGEN RF+IK VML +
Subjt:  MSDGEQPQFELDPELERTFRRNRRRARQRQARRMEN-DNNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM

Query:  I
        +
Subjt:  I

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]2.7e-1342.74Show/hide
Query:  FMSDGEQPQFELDPELERTFRRNRRRARQRQARR-MENDNNRNAPPPQAVQ---------------EPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPV
        +MS+G+ P F++DPE+ERTFRR  R+ +QR++ + +E + +     PQA Q               + N   +AHD++ P+R YA+ NLYNF PGI  P 
Subjt:  FMSDGEQPQFELDPELERTFRRNRRRARQRQARR-MENDNNRNAPPPQAVQ---------------EPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPV

Query:  FGENARFEIKHVMLQMI
        F  N RFE+K VMLQM+
Subjt:  FGENARFEIKHVMLQMI

TrEMBL top hitse value%identityAlignment
A0A5A7UDN8 Uncharacterized protein1.7e-1366.13Show/hide
Query:  NNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM
        NN+N P  Q  QE N AY+AHD D PI+SYA+ NLY+FNPGIAY  FGEN  FEIKH+ML M
Subjt:  NNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM

A0A5A7UXZ2 Retrovirus-related Pol polyprotein from transposon 17.64.1e-2055.45Show/hide
Query:  MSDGEQPQFELDPELERTFRRNRRRARQRQARRMEN-DNNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM
        MS+GEQP+F +D E+ER F+RNRR+ ++RQ     N  NN+ AP  QA+Q  N  Y+AH++D PIRS  + NLY FNPGI YP FGEN RF+IK VML +
Subjt:  MSDGEQPQFELDPELERTFRRNRRRARQRQARRMEN-DNNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM

Query:  I
        +
Subjt:  I

A0A5A7V2U7 Putative disease resistance RPP13-like protein 12.6e-1464.18Show/hide
Query:  MENDNNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQMI
        M N NN+  P  QA Q  N  Y+A D+D PIRSYA+ NLY+FNPGIAYP F EN RFEIK VMLQ+I
Subjt:  MENDNNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQMI

A0A5D3CAB5 Retrovirus-related Pol polyprotein from transposon 17.64.1e-2055.45Show/hide
Query:  MSDGEQPQFELDPELERTFRRNRRRARQRQARRMEN-DNNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM
        MS+GEQP+F +D E+ER F+RNRR+ ++RQ     N  NN+ AP  QA+Q  N  Y+AH++D PIRS  + NLY FNPGI YP FGEN RF+IK VML +
Subjt:  MSDGEQPQFELDPELERTFRRNRRRARQRQARRMEN-DNNRNAPPPQAVQEPNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM

Query:  I
        +
Subjt:  I

A0A5D3D4Y1 Uncharacterized protein8.7e-1073.91Show/hide
Query:  AYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM
        AY+AHD D  IRSY +SN Y+FNPGIAYPV GE+ RFEIKHVM QM
Subjt:  AYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCAATGCCCATTCCAGGCGGCCTGTGCAATCAGATGTCTTTGAATCGCATGATCACCTTCCATGCCCATAAAGAGATGAAAAGGCGGTCAAAGACATTGGGTGA
CACAGCGAGTGAAGAAGTTCAATTTCAGCTATATCGTGCGTTCAAACCCGAAGAGCGCGTGAACAAGTTTATGAGTGACGGTGAACAGCCGCAATTCGAGCTTGACCCTG
AACTTGAGCGAACATTTCGGCGTAATCGGCGAAGAGCGAGGCAAAGACAAGCAAGAAGAATGGAAAATGATAATAATAGAAACGCCCCTCCGCCGCAAGCTGTCCAAGAA
CCAAATGCCGCCTACATAGCACATGACCAGGACATGCCAATTAGGTCATATGCGGCATCTAACCTCTACAACTTCAACCCAGGGATCGCCTACCCTGTGTTCGGCGAAAA
TGCAAGGTTTGAAATCAAGCATGTGATGCTACAAATGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTCAATGCCCATTCCAGGCGGCCTGTGCAATCAGATGTCTTTGAATCGCATGATCACCTTCCATGCCCATAAAGAGATGAAAAGGCGGTCAAAGACATTGGGTGA
CACAGCGAGTGAAGAAGTTCAATTTCAGCTATATCGTGCGTTCAAACCCGAAGAGCGCGTGAACAAGTTTATGAGTGACGGTGAACAGCCGCAATTCGAGCTTGACCCTG
AACTTGAGCGAACATTTCGGCGTAATCGGCGAAGAGCGAGGCAAAGACAAGCAAGAAGAATGGAAAATGATAATAATAGAAACGCCCCTCCGCCGCAAGCTGTCCAAGAA
CCAAATGCCGCCTACATAGCACATGACCAGGACATGCCAATTAGGTCATATGCGGCATCTAACCTCTACAACTTCAACCCAGGGATCGCCTACCCTGTGTTCGGCGAAAA
TGCAAGGTTTGAAATCAAGCATGTGATGCTACAAATGATTTAG
Protein sequenceShow/hide protein sequence
MNSMPIPGGLCNQMSLNRMITFHAHKEMKRRSKTLGDTASEEVQFQLYRAFKPEERVNKFMSDGEQPQFELDPELERTFRRNRRRARQRQARRMENDNNRNAPPPQAVQE
PNAAYIAHDQDMPIRSYAASNLYNFNPGIAYPVFGENARFEIKHVMLQMI