CuGenDBv2

Gene ID	PI0021568
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Pentatricopeptide repeat (PPR) superfamily protein
Genome location	chr01:4484170..4488751
RNA-Seq Expression	PI0021568
Synteny	PI0021568
Gene Ontology terms	GO:0005635 - nuclear envelope (cellular component) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029159 - Casein Kinase 2 substrate IPR038985 - At5g43822-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144893.1 uncharacterized protein At5g43822 isoform X2 [Cucumis sativus]

1.2e-100

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Query:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+VKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSG+DGI EALL KQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
Subjt:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPS+KQLQQ+VGLKPSLEDCLNGLMLLC+MHRSEYNLKESIVSALPELFWKARNHGAQDLSSL QLLVDQPNIKKEEVEFVFDTILVLEA
Subjt:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA

XP_008447827.1 PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo]

7.2e-101

95.5

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Query:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+VKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSG+DGI EALLGKQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPS+KQLQQRVGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARNHGAQDLSSL QLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA

XP_008447828.1 PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo]

9.8e-98

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Query:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+VKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR   LQDPKNFGSLSG+DGI EALLGKQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPS+KQLQQRVGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARNHGAQDLSSL QLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA

XP_016900442.1 PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo]

4.4e-98

94.5

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Query:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+VKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSG+DGI EALLGKQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPS+KQLQQRVGLKPSLEDCLNGLM+LCNMHRS+  LKESIVSALPELFWKARNHGAQDLSSL QLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA

XP_022928127.1 uncharacterized protein At5g43822 isoform X3 [Cucurbita moschata]

2.8e-92

88.5

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Query:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+VKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQ+LQDP N+GSLSG+DGI +ALL KQMESLQL FSSI KTMEELGNIV SMEKIYRD
Subjt:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQL+KGGSNQPS KQLQQRVGLKPSLEDCLNGL LLC+MHRSEY+LKES+VSALPELFWK RNH AQDLSSLQQLLVDQPNI+KEEVEF+FDTILV EA
Subjt:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4X9 Uncharacterized protein

6.0e-101

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Query:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+VKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSG+DGI EALL KQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
Subjt:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPS+KQLQQ+VGLKPSLEDCLNGLMLLC+MHRSEYNLKESIVSALPELFWKARNHGAQDLSSL QLLVDQPNIKKEEVEFVFDTILVLEA
Subjt:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA

A0A1S3BIA7 uncharacterized protein At5g43822 isoform X1

3.5e-101

95.5

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Query:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+VKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSG+DGI EALLGKQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPS+KQLQQRVGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARNHGAQDLSSL QLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA

A0A1S3BIY0 uncharacterized protein At5g43822 isoform X3

4.7e-98

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Query:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+VKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR   LQDPKNFGSLSG+DGI EALLGKQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPS+KQLQQRVGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARNHGAQDLSSL QLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA

A0A1S4DWT4 uncharacterized protein At5g43822 isoform X2

2.1e-98

94.5

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Query:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+VKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSG+DGI EALLGKQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPS+KQLQQRVGLKPSLEDCLNGLM+LCNMHRS+  LKESIVSALPELFWKARNHGAQDLSSL QLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA

A0A6J1EJ12 uncharacterized protein At5g43822 isoform X3

1.3e-92

88.5

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Query:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+VKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQ+LQDP N+GSLSG+DGI +ALL KQMESLQL FSSI KTMEELGNIV SMEKIYRD
Subjt:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQL+KGGSNQPS KQLQQRVGLKPSLEDCLNGL LLC+MHRSEY+LKES+VSALPELFWK RNH AQDLSSLQQLLVDQPNI+KEEVEF+FDTILV EA
Subjt:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA

SwissProt top hits

e value

%identity

Alignment

Q6NPG7 Uncharacterized protein At5g43822

2.3e-41

46.23

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Query:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + GI +A++ +QM  L+    S+K  MEE    V + EK++RD
Subjt:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLE
        G QL      + S +++++R+G+KP + DCL GL +L +MH+SEY+LK SI+S L  L  K       DL++LQ L+VDQPNI K+EV+ +FD I   E
Subjt:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLE

Arabidopsis top hits

e value

%identity

Alignment

AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein

1.6e-42

46.23

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Query:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + GI +A++ +QM  L+    S+K  MEE    V + EK++RD
Subjt:  MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLE
        G QL      + S +++++R+G+KP + DCL GL +L +MH+SEY+LK SI+S L  L  K       DL++LQ L+VDQPNI K+EV+ +FD I   E
Subjt:  GKQLVKGGSNQPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGCCATTGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCTTC
CTCCATCATTGGGAGGCTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATAGATGGCATTGCAGAGGCGTTATTGGGGAAGCAGATGGAATCCTTGC
AACTTAGTTTCTCTTCCATTAAAAAAACAATGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCCAAT
CAGCCATCAGTAAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGCCTTGAAGATTGTCTGAATGGCTTAATGCTTCTCTGCAACATGCACCGCTCTGAGTACAATCT
TAAAGAATCTATTGTCTCAGCACTTCCGGAACTTTTCTGGAAAGCTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACAGCAACTCTTGGTTGACCAACCTAACATTA
AGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAG

mRNA sequence

Show/hide mRNA sequence

CTCACTTCCACTATTCTCTTGTGCAAAGCGGCAGGCCACCAGTTCTCGAAATAACACCGGCGACCGTAACGACTCCGGCCAGCAACGACTAACGGCGGCCTGTGAAGCCG
CACTCACAGCGACGCAAGCTCCTTCCTGCAGCGGCGGTGCTCTATCCACGAACCACGACGCCCTACCTACGGCGGCGCGATTCCTCTACTTTCTTCTCAGTAACGGTGGT
GTTGTGTCAGTCTAAATTTCAATCTATGGAGGCCATTGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTT
TGATTTCGCAGTTCCAAAATGCTTCCTCCATCATTGGGAGGCTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATAGATGGCATTGCAGAGGCGTTA
TTGGGGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAAACAATGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAA
GCAATTAGTCAAAGGCGGTTCCAATCAGCCATCAGTAAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGCCTTGAAGATTGTCTGAATGGCTTAATGCTTCTCTGCA
ACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATTGTCTCAGCACTTCCGGAACTTTTCTGGAAAGCTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACAGCAA
CTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAGCTAATATATGATACTATCAAACAACTCAAGAA
CATATGATTTCATCCACATGATTTTTCTCTGCATGACTAGCAACAAAATCTCATATACTTTCAATATCAACTATTGGAAGAGTTGAACGAACCACGAAACCAACAAGAAG
ATGAACTTCAAGGATATCTCACCTGGTGGTTATTGTTAGTATGACCATTGCGTAGCAGATAAAAGCGCAATCAACCGCTCGAATGTAGATTCGATCTTCCATTGTTGAAC
TCAAAAAGGTAAAGAATTTACCTTGTGAGTTTGATACATTATAACAATCTTTTGTGCCATTTTGGCATTTGGAGAGTGTAGAATTATAAATGTGAAAGCTTCCTGATATT
CATTTTTAAATGGATGGATTGGATGGATAAGTCCCATGGGAGAAAATTAAATATTGCCATTTTATTATTTTAAAGCTCGGATTTGTCATTTT

Protein sequence

Show/hide protein sequence

MEAIVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGIDGIAEALLGKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSN
QPSVKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLQQLLVDQPNIKKEEVEFVFDTILVLEA

PI0021568 (gene) of Melon (PI 482460) v1 genome