; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021609 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021609
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr06:16487585..16488738
RNA-Seq ExpressionPI0021609
SyntenyPI0021609
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.2e-2034.27Show/hide
Query:  MTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKK----SNNVK--------------VMREGG
        MTV +YEKK+T+L+KYA   + DEV++CK FE GLQ EIR PVTT  D +DFSKLVEA +RVE SL E+K+    S NV+                R  G
Subjt:  MTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKK----SNNVK--------------VMREGG

Query:  IRHPQCPSGSKMNYEGGFRRQNRSQGRGNVSV-------WKEDDPPRRQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSK---GLGRPKSQGKVCMMNQS
          HP    G   +Y     R     G+ +V         ++ D P              +    +P  +  + EG SG K    +GR + +GKV  M Q 
Subjt:  IRHPQCPSGSKMNYEGGFRRQNRSQGRGNVSV-------WKEDDPPRRQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSK---GLGRPKSQGKVCMMNQS

Query:  ETKSSSHHVK-SLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVE
        E   + + V   ++ ++E L +E+LI  P G+  +V SV R   + ++
Subjt:  ETKSSSHHVK-SLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVE

KAA0052118.1 Retrotransposon gag protein [Cucumis melo var. makuwa]7.6e-2134.01Show/hide
Query:  VDSPCDKNGQTKFCFLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKKSNNVKV
        VDSP D++            +GD+T+ EYEK+FT   KYALAFV++E +KC+ FE GLQ EIR PV  + DC                            
Subjt:  VDSPCDKNGQTKFCFLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKKSNNVKV

Query:  MREGGIRHPQCPSGSKMNYEGGFRRQNRSQGRGNVSVWKEDDPPRRQTTGLSSNYVG-RPGHPKPYQLEEAREGPSGSKGLGRPKSQGKVCMMNQSETKS
                          Y   F+RQN+SQG GNV ++ E+    RQ  G++           +PYQ   A EG S  K   R KSQ KVC M Q+E   
Subjt:  MREGGIRHPQCPSGSKMNYEGGFRRQNRSQGRGNVSVWKEDDPPRRQTTGLSSNYVG-RPGHPKPYQLEEAREGPSGSKGLGRPKSQGKVCMMNQSETKS

Query:  SSHHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVENVVM
                          MLI  PSG++++VE VCRD E+ ++NV +
Subjt:  SSHHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVENVVM

KAA0055470.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.7e-1731.44Show/hide
Query:  FLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKKSNNVK--VMREGGIRHPQ--
        FLE + +G + VVEYE K+T+L++YA   V  E D+C+ FE GL+ E+R PVT     ++FS+LVE  +RVE S+ E+K +  +   V    GIR  +  
Subjt:  FLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKKSNNVK--VMREGGIRHPQ--

Query:  ----------CP-----SGSK----MNYEGGFRRQNR--------SQGRGNVSVWKEDDPPR----RQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSKG
                  C      SG K    M+    ++RQ++        S  R     +K D P      R+  G+ S+ V      +P     A EG SG++ 
Subjt:  ----------CP-----SGSK----MNYEGGFRRQNR--------SQGRGNVSVWKEDDPPR----RQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSKG

Query:  ---LGRPKSQGKVCMMNQSETKS-----------------------------SSHHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVENVVM
           +GRP+ QGKV  M Q E +                              SS  +  LN  +EPL +E++I  P G++++V  V RD EV VE + M
Subjt:  ---LGRPKSQGKVCMMNQSETKS-----------------------------SSHHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVENVVM

KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]7.8e-1830.28Show/hide
Query:  RVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKK-----------SNNVKVMREGGI
        R+ +G MT+ EYEKK+T+L+ YA   + DEV++CK FE GL+ EIR PVT   D +DFSKLVEA +RVE SL E+K+           S+++   R+G  
Subjt:  RVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKK-----------SNNVKVMREGGI

Query:  RHPQCPSG----------------SKMNYEGGFRRQNRS----QGRGNVSVWKEDDPPRRQTTGLSSNYVGRPGH------------------------P
        R  +   G                SK    GG +R + S       G   + + D      +        G+PGH                         
Subjt:  RHPQCPSG----------------SKMNYEGGFRRQNRS----QGRGNVSVWKEDDPPRRQTTGLSSNYVGRPGH------------------------P

Query:  KPYQLEEAREGPSGSK---GLGRPKSQGKVCMMNQSETKSSSHHVK-SLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVE
        +P     + EG SG K    +GR + +GKV  M Q E   + + V   ++ ++E L +E+LI    G+  +V SV R   + ++
Subjt:  KPYQLEEAREGPSGSK---GLGRPKSQGKVCMMNQSETKSSSHHVK-SLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVE

TYK08952.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.7e-1731.44Show/hide
Query:  FLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKKSNNVK--VMREGGIRHPQ--
        FLE + +G + VVEYE K+T+L++YA   V  E D+C+ FE GL+ E+R PVT     ++FS+LVE  +RVE S+ E+K +  +   V    GIR  +  
Subjt:  FLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKKSNNVK--VMREGGIRHPQ--

Query:  ----------CP-----SGSK----MNYEGGFRRQNR--------SQGRGNVSVWKEDDPPR----RQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSKG
                  C      SG K    M+    ++RQ++        S  R     +K D P      R+  G+ S+ V      +P     A EG SG++ 
Subjt:  ----------CP-----SGSK----MNYEGGFRRQNR--------SQGRGNVSVWKEDDPPR----RQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSKG

Query:  ---LGRPKSQGKVCMMNQSETKS-----------------------------SSHHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVENVVM
           +GRP+ QGKV  M Q E +                              SS  +  LN  +EPL +E++I  P G++++V  V RD EV VE + M
Subjt:  ---LGRPKSQGKVCMMNQSETKS-----------------------------SSHHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVENVVM

TrEMBL top hitse value%identityAlignment
A0A5A7T0V0 DNA/RNA polymerases superfamily protein8.4e-1834.02Show/hide
Query:  CDKNGQTKFCFLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLD---CSDFSKLVEAVMRVENSLTEQKKSNNVKVM
        CD N      F+  V +GD+TV EYEK+F +LAKYA  FV+DE DKCK F+ GLQ EIR  +T +++   C   SK           L+E KK       
Subjt:  CDKNGQTKFCFLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLD---CSDFSKLVEAVMRVENSLTEQKKSNNVKVM

Query:  REGGIRHPQCPSGSKMNYEGGFRRQNRSQGRGNVSVWKEDDPPRRQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSKGLGRPKSQGKVCMMNQSETKSSS
                       +N                                            +PYQ ++A  GPSG K   R K QG VC M +SE    +
Subjt:  REGGIRHPQCPSGSKMNYEGGFRRQNRSQGRGNVSVWKEDDPPRRQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSKGLGRPKSQGKVCMMNQSETKSSS

Query:  HHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVE
         HV +     EPLE E+LI  PSGE+ ++E VCRD EV +E
Subjt:  HHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVE

A0A5A7UA44 Retrotransposon gag protein3.7e-2134.01Show/hide
Query:  VDSPCDKNGQTKFCFLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKKSNNVKV
        VDSP D++            +GD+T+ EYEK+FT   KYALAFV++E +KC+ FE GLQ EIR PV  + DC                            
Subjt:  VDSPCDKNGQTKFCFLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKKSNNVKV

Query:  MREGGIRHPQCPSGSKMNYEGGFRRQNRSQGRGNVSVWKEDDPPRRQTTGLSSNYVG-RPGHPKPYQLEEAREGPSGSKGLGRPKSQGKVCMMNQSETKS
                          Y   F+RQN+SQG GNV ++ E+    RQ  G++           +PYQ   A EG S  K   R KSQ KVC M Q+E   
Subjt:  MREGGIRHPQCPSGSKMNYEGGFRRQNRSQGRGNVSVWKEDDPPRRQTTGLSSNYVG-RPGHPKPYQLEEAREGPSGSKGLGRPKSQGKVCMMNQSETKS

Query:  SSHHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVENVVM
                          MLI  PSG++++VE VCRD E+ ++NV +
Subjt:  SSHHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVENVVM

A0A5A7UJV1 DNA/RNA polymerases superfamily protein8.4e-1831.44Show/hide
Query:  FLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKKSNNVK--VMREGGIRHPQ--
        FLE + +G + VVEYE K+T+L++YA   V  E D+C+ FE GL+ E+R PVT     ++FS+LVE  +RVE S+ E+K +  +   V    GIR  +  
Subjt:  FLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKKSNNVK--VMREGGIRHPQ--

Query:  ----------CP-----SGSK----MNYEGGFRRQNR--------SQGRGNVSVWKEDDPPR----RQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSKG
                  C      SG K    M+    ++RQ++        S  R     +K D P      R+  G+ S+ V      +P     A EG SG++ 
Subjt:  ----------CP-----SGSK----MNYEGGFRRQNR--------SQGRGNVSVWKEDDPPR----RQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSKG

Query:  ---LGRPKSQGKVCMMNQSETKS-----------------------------SSHHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVENVVM
           +GRP+ QGKV  M Q E +                              SS  +  LN  +EPL +E++I  P G++++V  V RD EV VE + M
Subjt:  ---LGRPKSQGKVCMMNQSETKS-----------------------------SSHHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVENVVM

A0A5A7UZM6 Gag protease polyprotein-like protein3.8e-1830.28Show/hide
Query:  RVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKK-----------SNNVKVMREGGI
        R+ +G MT+ EYEKK+T+L+ YA   + DEV++CK FE GL+ EIR PVT   D +DFSKLVEA +RVE SL E+K+           S+++   R+G  
Subjt:  RVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKK-----------SNNVKVMREGGI

Query:  RHPQCPSG----------------SKMNYEGGFRRQNRS----QGRGNVSVWKEDDPPRRQTTGLSSNYVGRPGH------------------------P
        R  +   G                SK    GG +R + S       G   + + D      +        G+PGH                         
Subjt:  RHPQCPSG----------------SKMNYEGGFRRQNRS----QGRGNVSVWKEDDPPRRQTTGLSSNYVGRPGH------------------------P

Query:  KPYQLEEAREGPSGSK---GLGRPKSQGKVCMMNQSETKSSSHHVK-SLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVE
        +P     + EG SG K    +GR + +GKV  M Q E   + + V   ++ ++E L +E+LI    G+  +V SV R   + ++
Subjt:  KPYQLEEAREGPSGSK---GLGRPKSQGKVCMMNQSETKSSSHHVK-SLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVE

A0A5D3DES5 DNA/RNA polymerases superfamily protein1.1e-2034.27Show/hide
Query:  MTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKK----SNNVK--------------VMREGG
        MTV +YEKK+T+L+KYA   + DEV++CK FE GLQ EIR PVTT  D +DFSKLVEA +RVE SL E+K+    S NV+                R  G
Subjt:  MTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSLTEQKK----SNNVK--------------VMREGG

Query:  IRHPQCPSGSKMNYEGGFRRQNRSQGRGNVSV-------WKEDDPPRRQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSK---GLGRPKSQGKVCMMNQS
          HP    G   +Y     R     G+ +V         ++ D P              +    +P  +  + EG SG K    +GR + +GKV  M Q 
Subjt:  IRHPQCPSGSKMNYEGGFRRQNRSQGRGNVSV-------WKEDDPPRRQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSK---GLGRPKSQGKVCMMNQS

Query:  ETKSSSHHVK-SLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVE
        E   + + V   ++ ++E L +E+LI  P G+  +V SV R   + ++
Subjt:  ETKSSSHHVK-SLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCGAAGAAAAGAAGGTGACATTGGCAACATTTTTGTTGCAAGGAAACGCCGAAGACCGGTGGACTCTCCATGCGACAAAAACGGGCAGACCAAGTTTTGTTTCTT
GGAAAGAGTTTGGGAAGGTGACATGACTGTCGTAGAGTACGAAAAGAAATTCACGAAGCTGGCTAAGTATGCTTTAGCCTTTGTGGTTGATGAAGTGGACAAATGTAAAT
GTTTTGAGGGAGGTTTGCAAGCAGAAATCAGAATTCCAGTGACGACAAGTCTGGATTGTTCTGACTTCTCCAAATTGGTAGAAGCCGTCATGAGAGTAGAAAATAGCCTG
ACAGAACAAAAGAAAAGTAATAACGTTAAGGTAATGCGTGAGGGAGGGATCCGACATCCACAATGTCCGTCTGGATCCAAAATGAACTATGAAGGGGGTTTTCGGAGACA
AAATAGGAGCCAAGGGAGAGGAAATGTTTCCGTATGGAAAGAAGATGATCCTCCAAGGAGGCAGACAACTGGACTTAGTTCAAACTATGTGGGAAGACCTGGTCATCCCA
AGCCCTACCAACTTGAAGAAGCTAGAGAAGGACCAAGTGGAAGTAAGGGACTAGGAAGACCCAAGTCACAAGGAAAAGTTTGCATGATGAACCAGAGTGAGACCAAAAGC
AGCTCGCATCATGTTAAGTCCCTAAACCATAAGATAGAACCTCTAGAGGATGAAATGTTGATTGGCATGCCTTCAGGCGAGATGATTATGGTAGAATCAGTATGTAGGGA
CTGGGAGGTAAGAGTTGAAAATGTTGTAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCCGAAGAAAAGAAGGTGACATTGGCAACATTTTTGTTGCAAGGAAACGCCGAAGACCGGTGGACTCTCCATGCGACAAAAACGGGCAGACCAAGTTTTGTTTCTT
GGAAAGAGTTTGGGAAGGTGACATGACTGTCGTAGAGTACGAAAAGAAATTCACGAAGCTGGCTAAGTATGCTTTAGCCTTTGTGGTTGATGAAGTGGACAAATGTAAAT
GTTTTGAGGGAGGTTTGCAAGCAGAAATCAGAATTCCAGTGACGACAAGTCTGGATTGTTCTGACTTCTCCAAATTGGTAGAAGCCGTCATGAGAGTAGAAAATAGCCTG
ACAGAACAAAAGAAAAGTAATAACGTTAAGGTAATGCGTGAGGGAGGGATCCGACATCCACAATGTCCGTCTGGATCCAAAATGAACTATGAAGGGGGTTTTCGGAGACA
AAATAGGAGCCAAGGGAGAGGAAATGTTTCCGTATGGAAAGAAGATGATCCTCCAAGGAGGCAGACAACTGGACTTAGTTCAAACTATGTGGGAAGACCTGGTCATCCCA
AGCCCTACCAACTTGAAGAAGCTAGAGAAGGACCAAGTGGAAGTAAGGGACTAGGAAGACCCAAGTCACAAGGAAAAGTTTGCATGATGAACCAGAGTGAGACCAAAAGC
AGCTCGCATCATGTTAAGTCCCTAAACCATAAGATAGAACCTCTAGAGGATGAAATGTTGATTGGCATGCCTTCAGGCGAGATGATTATGGTAGAATCAGTATGTAGGGA
CTGGGAGGTAAGAGTTGAAAATGTTGTAATGTAG
Protein sequenceShow/hide protein sequence
MPRRKEGDIGNIFVARKRRRPVDSPCDKNGQTKFCFLERVWEGDMTVVEYEKKFTKLAKYALAFVVDEVDKCKCFEGGLQAEIRIPVTTSLDCSDFSKLVEAVMRVENSL
TEQKKSNNVKVMREGGIRHPQCPSGSKMNYEGGFRRQNRSQGRGNVSVWKEDDPPRRQTTGLSSNYVGRPGHPKPYQLEEAREGPSGSKGLGRPKSQGKVCMMNQSETKS
SSHHVKSLNHKIEPLEDEMLIGMPSGEMIMVESVCRDWEVRVENVVM