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PI0021624 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021624
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr02:8511921..8512409
RNA-Seq ExpressionPI0021624
SyntenyPI0021624
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]7.1e-3068.04Show/hide
Query:  NNRNAPPLQAAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGIS
        NN+N P  Q  QE N AY+AHDLD+PI+SYA+PNLY+FNPGIAY  F EN  FEIK +ML M QNA QFGGHP EDP++HIR FY ICASF+M  IS
Subjt:  NNRNAPPLQAAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.1e-3571.3Show/hide
Query:  NNRNAPPLQAAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGISPEE
        NN+  P  QAAQ  N  Y+A D DRPIRSYA+PNLY+FNPGIAYP F EN RFEIK VMLQ+IQNA QF  HP +DPH++IR FYSICASFHMPGIS EE
Subjt:  NNRNAPPLQAAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGISPEE

Query:  LRFALFPL
        LRF  F L
Subjt:  LRFALFPL

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]9.6e-2761.76Show/hide
Query:  MENNNRNAPPLQAAQ--EPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPG
        M +N  N  PL +A   + N+  +AH+LD PIR+Y + NLY+FN GIAY VF ENA FE+KPVMLQMIQ A QF G+ GEDPHEHI++FYSICASFHM  
Subjt:  MENNNRNAPPLQAAQ--EPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPG

Query:  IS
         S
Subjt:  IS

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]6.0e-2953.85Show/hide
Query:  NRNAPPLQAAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGISPEEL
        N NA    A  + N   +AHD +RP+R YA+PNLYNF PGI  P F+ N RFE+KPVMLQM+Q A QFGG  GEDPH H+++F  IC++F M G+  + +
Subjt:  NRNAPPLQAAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGISPEEL

Query:  RFALFPLTLRNEAMRWA
        R  LFP +LR+EA +WA
Subjt:  RFALFPLTLRNEAMRWA

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]2.5e-2751.61Show/hide
Query:  ENNNRNAPP-LQAAQEP--NVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPG
        +NNN  AP   Q    P  +  ++A D + PIR+YAAPNLY+F+PGI+ P+ +ENARFEIKPVM+QMIQN  QF     E+PH H+  F  +C++F +PG
Subjt:  ENNNRNAPP-LQAAQEP--NVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPG

Query:  ISPEELRFALFPLTLRNEAMRWAN
        I+P  +R  LFP TLR++A RWA+
Subjt:  ISPEELRFALFPLTLRNEAMRWAN

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein5.3e-2349.51Show/hide
Query:  NVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGISPEELRFALFPLTLRNEA
        N   +AH+L+ PI  YA+P+LY FN GI YP F  NARF++KP ML MIQ   QFGG+  EDP +HI++ Y +C+SFH+P +S E+L    F  TL+++ 
Subjt:  NVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGISPEELRFALFPLTLRNEA

Query:  MRW
         +W
Subjt:  MRW

A0A5A7UDN8 Uncharacterized protein3.4e-3068.04Show/hide
Query:  NNRNAPPLQAAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGIS
        NN+N P  Q  QE N AY+AHDLD+PI+SYA+PNLY+FNPGIAY  F EN  FEIK +ML M QNA QFGGHP EDP++HIR FY ICASF+M  IS
Subjt:  NNRNAPPLQAAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 15.5e-3671.3Show/hide
Query:  NNRNAPPLQAAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGISPEE
        NN+  P  QAAQ  N  Y+A D DRPIRSYA+PNLY+FNPGIAYP F EN RFEIK VMLQ+IQNA QF  HP +DPH++IR FYSICASFHMPGIS EE
Subjt:  NNRNAPPLQAAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGISPEE

Query:  LRFALFPL
        LRF  F L
Subjt:  LRFALFPL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 14.6e-2761.76Show/hide
Query:  MENNNRNAPPLQAAQ--EPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPG
        M +N  N  PL +A   + N+  +AH+LD PIR+Y + NLY+FN GIAY VF ENA FE+KPVMLQMIQ A QF G+ GEDPHEHI++FYSICASFHM  
Subjt:  MENNNRNAPPLQAAQ--EPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPG

Query:  IS
         S
Subjt:  IS

U5CUK7 Uncharacterized protein2.7e-1948.18Show/hide
Query:  AAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGISPEELRFALFPLT
        A  E N   +A D  R IR YAAP     N GI  P   +   FE+KPVM QM+Q   QFGG P EDPH HIR+F  +  SF + G+S E LR  LFP +
Subjt:  AAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGISPEELRFALFPLT

Query:  LRNEAMRWAN
        LR+ A  W N
Subjt:  LRNEAMRWAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACAATAATAGAAATGCCCCTCCGCTGCAAGCTGCCCAAGAACCAAATGTCGCCTACATGGCACATGACTTGGACAGACCAATTAGATCATATGCGGCACCCAA
CCTCTACAACTTCAACCCAGGGATCGCTTACCCTGTGTTCGATGAAAATGCTAGGTTTGAAATCAAGCCTGTAATGCTTCAAATGATTCAGAACGCCGAACAATTTGGCG
GTCACCCTGGAGAAGATCCACACGAGCACATTAGGACTTTCTACTCTATCTGTGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAACTAAGATTCGCACTTTTCCCA
TTAACTCTGAGGAATGAGGCAATGCGGTGGGCTAACCTTGGAGGATGGCGAGGTGGGAACATGGGATCAACTGATAGAGAAATTTATGAAGAAATTTTTCCCACCTCACG
AGAATGCCAGAAGAAGGAAAGAGATCATGAGCTTCCAGCAGAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACAATAATAGAAATGCCCCTCCGCTGCAAGCTGCCCAAGAACCAAATGTCGCCTACATGGCACATGACTTGGACAGACCAATTAGATCATATGCGGCACCCAA
CCTCTACAACTTCAACCCAGGGATCGCTTACCCTGTGTTCGATGAAAATGCTAGGTTTGAAATCAAGCCTGTAATGCTTCAAATGATTCAGAACGCCGAACAATTTGGCG
GTCACCCTGGAGAAGATCCACACGAGCACATTAGGACTTTCTACTCTATCTGTGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAACTAAGATTCGCACTTTTCCCA
TTAACTCTGAGGAATGAGGCAATGCGGTGGGCTAACCTTGGAGGATGGCGAGGTGGGAACATGGGATCAACTGATAGAGAAATTTATGAAGAAATTTTTCCCACCTCACG
AGAATGCCAGAAGAAGGAAAGAGATCATGAGCTTCCAGCAGAAAGATAG
Protein sequenceShow/hide protein sequence
MENNNRNAPPLQAAQEPNVAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFDENARFEIKPVMLQMIQNAEQFGGHPGEDPHEHIRTFYSICASFHMPGISPEELRFALFP
LTLRNEAMRWANLGGWRGGNMGSTDREIYEEIFPTSRECQKKERDHELPAER