; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021660 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021660
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionF-box protein
Genome locationchr09:20356271..20359839
RNA-Seq ExpressionPI0021660
SyntenyPI0021660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039382.1 F-box protein [Cucumis melo var. makuwa]1.3e-0642.73Show/hide
Query:  MTSCNGLLF-AVLTSDGGRSCEAIINPITNEVFKLPIPPPN-DCSAIGFGFIP---QYKLFRV-PTLIP-----YSDMEIIHFDRNGTYQFEDTVCLPFN
        + SCNGLL+    T D    CE I+NP+TNE  ++P P    D  +IGFGF P   QYKLFR  P ++      +  MEI  FD NG  Q+     LPF 
Subjt:  MTSCNGLLF-AVLTSDGGRSCEAIINPITNEVFKLPIPPPN-DCSAIGFGFIP---QYKLFRV-PTLIP-----YSDMEIIHFDRNGTYQFEDTVCLPFN

Query:  IDHNG-HING
        + H+G ++NG
Subjt:  IDHNG-HING

KGN52568.1 hypothetical protein Csa_008927 [Cucumis sativus]5.7e-0741.44Show/hide
Query:  MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPN---DCSAIGFGFIP---QYKLFRV-PTLIP-----YSDMEIIHFDRNGTYQFEDTVCLPF
        + SCNGLL+ +        CE I+NP+TNE   + IPPP+   D   +GFGF P   QYKLFR  P ++P     +  M+I  FD NG  Q+     LPF
Subjt:  MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPN---DCSAIGFGFIP---QYKLFRV-PTLIP-----YSDMEIIHFDRNGTYQFEDTVCLPF

Query:  NIDHNG-HING
         + H+G ++NG
Subjt:  NIDHNG-HING

TYK02998.1 F-box protein [Cucumis melo var. makuwa]9.3e-2659.8Show/hide
Query:  MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPNDCSAIGFGFIP---QYKLFRVPTLIPYSDMEIIHFDRNGTYQFEDTVCLPFNID-HNGHI
        +TSCNGLLFA+L+S G R C AIINP+TNE F+L IPPP + + IGFGF P   QYKLF V   +PYS+M+I  FDR+GT + +D +CLPFNID H  ++
Subjt:  MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPNDCSAIGFGFIP---QYKLFRVPTLIPYSDMEIIHFDRNGTYQFEDTVCLPFNID-HNGHI

Query:  NG
        NG
Subjt:  NG

XP_004141601.1 F-box protein At3g07870 [Cucumis sativus]3.1e-0539.81Show/hide
Query:  MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPNDCSA-IGFGFIP---QYKLFRVPTLIP---YSDMEIIHF-DRNGT-YQFEDTVCLPFNI-
        ++SC+ LL      D    CE I+NP+TNE  +LP    ++ S   GFGF P   QYKLFRV        YS MEI+ F DR+ T  ++    C P +  
Subjt:  MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPNDCSA-IGFGFIP---QYKLFRVPTLIP---YSDMEIIHF-DRNGT-YQFEDTVCLPFNI-

Query:  DHNGHING
        DH  ++NG
Subjt:  DHNGHING

XP_008459707.1 PREDICTED: F-box protein At3g07870-like [Cucumis melo]1.3e-0642.73Show/hide
Query:  MTSCNGLLF-AVLTSDGGRSCEAIINPITNEVFKLPIPPPN-DCSAIGFGFIP---QYKLFRV-PTLIP-----YSDMEIIHFDRNGTYQFEDTVCLPFN
        + SCNGLL+    T D    CE I+NP+TNE  ++P P    D  +IGFGF P   QYKLFR  P ++      +  MEI  FD NG  Q+     LPF 
Subjt:  MTSCNGLLF-AVLTSDGGRSCEAIINPITNEVFKLPIPPPN-DCSAIGFGFIP---QYKLFRV-PTLIP-----YSDMEIIHFDRNGTYQFEDTVCLPFN

Query:  IDHNG-HING
        + H+G ++NG
Subjt:  IDHNG-HING

TrEMBL top hitse value%identityAlignment
A0A0A0KSN0 Uncharacterized protein2.8e-0741.44Show/hide
Query:  MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPN---DCSAIGFGFIP---QYKLFRV-PTLIP-----YSDMEIIHFDRNGTYQFEDTVCLPF
        + SCNGLL+ +        CE I+NP+TNE   + IPPP+   D   +GFGF P   QYKLFR  P ++P     +  M+I  FD NG  Q+     LPF
Subjt:  MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPN---DCSAIGFGFIP---QYKLFRV-PTLIP-----YSDMEIIHFDRNGTYQFEDTVCLPF

Query:  NIDHNG-HING
         + H+G ++NG
Subjt:  NIDHNG-HING

A0A0A0KUJ1 FBA_3 domain-containing protein1.5e-0539.81Show/hide
Query:  MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPNDCSA-IGFGFIP---QYKLFRVPTLIP---YSDMEIIHF-DRNGT-YQFEDTVCLPFNI-
        ++SC+ LL      D    CE I+NP+TNE  +LP    ++ S   GFGF P   QYKLFRV        YS MEI+ F DR+ T  ++    C P +  
Subjt:  MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPNDCSA-IGFGFIP---QYKLFRVPTLIP---YSDMEIIHF-DRNGT-YQFEDTVCLPFNI-

Query:  DHNGHING
        DH  ++NG
Subjt:  DHNGHING

A0A1S3CB99 F-box protein At3g07870-like6.1e-0742.73Show/hide
Query:  MTSCNGLLF-AVLTSDGGRSCEAIINPITNEVFKLPIPPPN-DCSAIGFGFIP---QYKLFRV-PTLIP-----YSDMEIIHFDRNGTYQFEDTVCLPFN
        + SCNGLL+    T D    CE I+NP+TNE  ++P P    D  +IGFGF P   QYKLFR  P ++      +  MEI  FD NG  Q+     LPF 
Subjt:  MTSCNGLLF-AVLTSDGGRSCEAIINPITNEVFKLPIPPPN-DCSAIGFGFIP---QYKLFRV-PTLIP-----YSDMEIIHFDRNGTYQFEDTVCLPFN

Query:  IDHNG-HING
        + H+G ++NG
Subjt:  IDHNG-HING

A0A5A7T7C6 F-box protein6.1e-0742.73Show/hide
Query:  MTSCNGLLF-AVLTSDGGRSCEAIINPITNEVFKLPIPPPN-DCSAIGFGFIP---QYKLFRV-PTLIP-----YSDMEIIHFDRNGTYQFEDTVCLPFN
        + SCNGLL+    T D    CE I+NP+TNE  ++P P    D  +IGFGF P   QYKLFR  P ++      +  MEI  FD NG  Q+     LPF 
Subjt:  MTSCNGLLF-AVLTSDGGRSCEAIINPITNEVFKLPIPPPN-DCSAIGFGFIP---QYKLFRV-PTLIP-----YSDMEIIHFDRNGTYQFEDTVCLPFN

Query:  IDHNG-HING
        + H+G ++NG
Subjt:  IDHNG-HING

A0A5D3BVH7 F-box protein4.5e-2659.8Show/hide
Query:  MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPNDCSAIGFGFIP---QYKLFRVPTLIPYSDMEIIHFDRNGTYQFEDTVCLPFNID-HNGHI
        +TSCNGLLFA+L+S G R C AIINP+TNE F+L IPPP + + IGFGF P   QYKLF V   +PYS+M+I  FDR+GT + +D +CLPFNID H  ++
Subjt:  MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPNDCSAIGFGFIP---QYKLFRVPTLIPYSDMEIIHFDRNGTYQFEDTVCLPFNID-HNGHI

Query:  NG
        NG
Subjt:  NG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCATGCAATGGCCTTCTGTTTGCTGTCTTAACTAGTGATGGTGGTCGTTCTTGTGAAGCTATAATCAATCCAATAACTAACGAGGTCTTCAAACTTCCAATACC
TCCACCCAATGACTGTAGCGCTATCGGATTTGGTTTCATCCCTCAGTACAAATTGTTTAGAGTTCCCACACTCATCCCCTATAGCGATATGGAAATTATCCATTTCGATA
GAAATGGAACCTACCAATTTGAGGATACTGTGTGCCTTCCTTTCAACATTGACCACAATGGTCACATTAATGGTTCTAGTTTTGGAAGGAAAACTAGTGACACTAGAAAA
TCTTTTGATTGGACTCTAAATATGTTAGAGAATTTGTCTCTTAAGGACACTGGGTCTTCTTTGTTCCTATTTAGCATTGACCCAGTTGGAAATCAACCATTACAAGCAAG
AAAATCCGTTGTCGATCGTTGTTCTTCATCAGGGCTGGCCAGAGGAGTTCATATCTTTCCTGGGTTTTGCTTAATTTCATCTACTTCGTTCGTTTTCGCCCCTTTTCTGA
AGTTTTGTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCATGCAATGGCCTTCTGTTTGCTGTCTTAACTAGTGATGGTGGTCGTTCTTGTGAAGCTATAATCAATCCAATAACTAACGAGGTCTTCAAACTTCCAATACC
TCCACCCAATGACTGTAGCGCTATCGGATTTGGTTTCATCCCTCAGTACAAATTGTTTAGAGTTCCCACACTCATCCCCTATAGCGATATGGAAATTATCCATTTCGATA
GAAATGGAACCTACCAATTTGAGGATACTGTGTGCCTTCCTTTCAACATTGACCACAATGGTCACATTAATGGTTCTAGTTTTGGAAGGAAAACTAGTGACACTAGAAAA
TCTTTTGATTGGACTCTAAATATGTTAGAGAATTTGTCTCTTAAGGACACTGGGTCTTCTTTGTTCCTATTTAGCATTGACCCAGTTGGAAATCAACCATTACAAGCAAG
AAAATCCGTTGTCGATCGTTGTTCTTCATCAGGGCTGGCCAGAGGAGTTCATATCTTTCCTGGGTTTTGCTTAATTTCATCTACTTCGTTCGTTTTCGCCCCTTTTCTGA
AGTTTTGTTGCTGA
Protein sequenceShow/hide protein sequence
MTSCNGLLFAVLTSDGGRSCEAIINPITNEVFKLPIPPPNDCSAIGFGFIPQYKLFRVPTLIPYSDMEIIHFDRNGTYQFEDTVCLPFNIDHNGHINGSSFGRKTSDTRK
SFDWTLNMLENLSLKDTGSSLFLFSIDPVGNQPLQARKSVVDRCSSSGLARGVHIFPGFCLISSTSFVFAPFLKFCC