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PI0021669 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021669
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr03:9158641..9159948
RNA-Seq ExpressionPI0021669
SyntenyPI0021669
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]3.2e-3068.04Show/hide
Query:  NNRNAPPLQADPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGIS
        NN+N P  Q   E N AY+AHDLD+PI+SYA+PNLY+FNPGIA   FGEN  F+IKH+ML M QNAGQFGGHP EDP++HIR+FY ICASF M  IS
Subjt:  NNRNAPPLQADPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]5.3e-3367.59Show/hide
Query:  NNRNAPPLQADPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEE
        NN+  P  QA    N  Y+A D DRPIRSYA+PNLY+FNPGIA P F EN RF+IK VMLQ+IQNAGQF  HP +DPH++IR+FYSICASF+MPGIS EE
Subjt:  NNRNAPPLQADPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEE

Query:  LRFAIFPL
        LRF  F L
Subjt:  LRFAIFPL

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]3.1e-2560.78Show/hide
Query:  MENNNRNAPPLQA--DPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPG
        M +N  N  PL +    + N+  IAH+LD PIR+Y + NLY+FN GIA  VFGENA F++K VMLQMIQ AGQF G+ GEDPHEHI+SFYSICASF+M  
Subjt:  MENNNRNAPPLQA--DPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPG

Query:  IS
         S
Subjt:  IS

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]2.2e-3144.71Show/hide
Query:  FMSDSEQP-FELVPEIERTFRGNRRRARQRQVRGMENNNRNAPPLQ-----------------ADPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPV
        +MS+ + P F++ PEIERTFR   R+ +QR+       N +A   Q                 A+ + N   +AHD +RP+R YA+PNLYNF PGI  P 
Subjt:  FMSDSEQP-FELVPEIERTFRGNRRRARQRQVRGMENNNRNAPPLQ-----------------ADPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPV

Query:  FGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEELRFAIFPLTLRDEAKR
        F  N RF++K VMLQM+Q AGQFGG  GEDPH H++SF  IC++F M G+  + +R  +FP +LRDEA++
Subjt:  FGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEELRFAIFPLTLRDEAKR

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]3.9e-2846.41Show/hide
Query:  SEQPFELVPEIERTF--RGNRRRARQRQVRGMENNNRNAPPLQAD---PEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMI
        ++  FE  PEI+ TF  R ++ RA +R++   +NNN  AP        P  +  ++A D + PIR+YAAPNLY+F+PGI+ P+  ENARF+IK VM+QMI
Subjt:  SEQPFELVPEIERTF--RGNRRRARQRQVRGMENNNRNAPPLQAD---PEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMI

Query:  QNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEELRFAIFPLTLRDEAKR
        QN  QF     E+PH H+  F  +C++F +PGI+P  +R  +FP TLRD+AKR
Subjt:  QNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEELRFAIFPLTLRDEAKR

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein5.9e-2251.96Show/hide
Query:  NVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEELRFAIFPLTLRDEA
        N   IAH+L+ PI  YA+P+LY FN GI  P FG NARFK+K  ML MIQ   QFGG+  EDP +HI+S Y +C+SF++P +S E+L    F  TL+D+ 
Subjt:  NVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEELRFAIFPLTLRDEA

Query:  KR
        K+
Subjt:  KR

A0A5A7UDN8 Uncharacterized protein1.6e-3068.04Show/hide
Query:  NNRNAPPLQADPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGIS
        NN+N P  Q   E N AY+AHDLD+PI+SYA+PNLY+FNPGIA   FGEN  F+IKH+ML M QNAGQFGGHP EDP++HIR+FY ICASF M  IS
Subjt:  NNRNAPPLQADPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 12.6e-3367.59Show/hide
Query:  NNRNAPPLQADPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEE
        NN+  P  QA    N  Y+A D DRPIRSYA+PNLY+FNPGIA P F EN RF+IK VMLQ+IQNAGQF  HP +DPH++IR+FYSICASF+MPGIS EE
Subjt:  NNRNAPPLQADPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEE

Query:  LRFAIFPL
        LRF  F L
Subjt:  LRFAIFPL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 11.5e-2560.78Show/hide
Query:  MENNNRNAPPLQA--DPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPG
        M +N  N  PL +    + N+  IAH+LD PIR+Y + NLY+FN GIA  VFGENA F++K VMLQMIQ AGQF G+ GEDPHEHI+SFYSICASF+M  
Subjt:  MENNNRNAPPLQA--DPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPG

Query:  IS
         S
Subjt:  IS

U5CUK7 Uncharacterized protein8.8e-1848.11Show/hide
Query:  ADPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEELRFAIFPLT
        A  E N   +A D  R IR YAAP     N GI  P   +   F++K VM QM+Q  GQFGG P EDPH HIRSF  +  SF + G+S E LR  +FP +
Subjt:  ADPEPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEELRFAIFPLT

Query:  LRDEAK
        LRD A+
Subjt:  LRDEAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTCCTGCTTGGCAGGCGGCAAAAGAGATAGAGATATCTCCTTCGCGGAACTTATCCTTAGCATATTACTCAAAAATGACGAAATATGTGGCGGAAGCACCGAGAG
GTTGCTCGCCTTAATTAAGGGTGAAACTCAGTTTCAGTTGAATCGCACGTTCAAACCCAAAGAACGTGAGAACAAGTTTATGAGTGACAGTGAACAACCATTCGAACTTG
TCCCTGAAATTGAACGAACATTTCGGGGTAATCGGCGAAGAGCAAGGCAGAGACAAGTTCGTGGGATGGAAAATAACAACAGAAATGCCCCTCCGCTGCAAGCTGACCCA
GAACCAAACGTCGCCTATATAGCACATGACTTGGATAGACCGATTAGATCTTATGCGGCGCCCAACCTCTATAACTTCAACCCAGGAATCGCCGACCCTGTATTTGGTGA
GAACGCCAGGTTTAAAATCAAACATGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGGACATCCTGGGGAAGACCCACACGAACATATAAGGAGTTTCTACT
CCATCTGCGCTTCCTTCTATATGCCAGGCATCTCACCTGAAGAATTAAGATTTGCTATCTTTCCGTTAACTCTGAGGGATGAGGCGAAGAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGTCCTGCTTGGCAGGCGGCAAAAGAGATAGAGATATCTCCTTCGCGGAACTTATCCTTAGCATATTACTCAAAAATGACGAAATATGTGGCGGAAGCACCGAGAG
GTTGCTCGCCTTAATTAAGGGTGAAACTCAGTTTCAGTTGAATCGCACGTTCAAACCCAAAGAACGTGAGAACAAGTTTATGAGTGACAGTGAACAACCATTCGAACTTG
TCCCTGAAATTGAACGAACATTTCGGGGTAATCGGCGAAGAGCAAGGCAGAGACAAGTTCGTGGGATGGAAAATAACAACAGAAATGCCCCTCCGCTGCAAGCTGACCCA
GAACCAAACGTCGCCTATATAGCACATGACTTGGATAGACCGATTAGATCTTATGCGGCGCCCAACCTCTATAACTTCAACCCAGGAATCGCCGACCCTGTATTTGGTGA
GAACGCCAGGTTTAAAATCAAACATGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGGACATCCTGGGGAAGACCCACACGAACATATAAGGAGTTTCTACT
CCATCTGCGCTTCCTTCTATATGCCAGGCATCTCACCTGAAGAATTAAGATTTGCTATCTTTCCGTTAACTCTGAGGGATGAGGCGAAGAGGTAG
Protein sequenceShow/hide protein sequence
MRSCLAGGKRDRDISFAELILSILLKNDEICGGSTERLLALIKGETQFQLNRTFKPKERENKFMSDSEQPFELVPEIERTFRGNRRRARQRQVRGMENNNRNAPPLQADP
EPNVAYIAHDLDRPIRSYAAPNLYNFNPGIADPVFGENARFKIKHVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFYMPGISPEELRFAIFPLTLRDEAKR