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PI0021697 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021697
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr01:16535435..16535800
RNA-Seq ExpressionPI0021697
SyntenyPI0021697
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]1.2e-3770.83Show/hide
Query:  EDLDYIIEEVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGIS
        +D  YI++EVNVVS E+K + LDL+ KGEKKTKPS+EEPPELELK L NHLK  YL ENDTL + IS  L  A+EK LLNMLKRHKK I WTL +IQGIS
Subjt:  EDLDYIIEEVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGIS

Query:  PSYCMLKIRLEEGQEGTIQF
         SYCM K+RLEEGQE TIQF
Subjt:  PSYCMLKIRLEEGQEGTIQF

KAA0059789.1 uncharacterized protein E6C27_scaffold108G00540 [Cucumis melo var. makuwa]1.5e-2967.92Show/hide
Query:  VSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPSYCMLKIRLEE
        +S E+K +PLDL+TK EKKTKPS+EEPPELELKPL NHLK AYLGENDTL + I A L   +EKALL +LKR KK  RWTL +IQGIS SY + KI+L+E
Subjt:  VSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPSYCMLKIRLEE

Query:  GQEGTI
        GQ  TI
Subjt:  GQEGTI

TYJ96913.1 uncharacterized protein E5676_scaffold220G00140 [Cucumis melo var. makuwa]2.5e-2476.62Show/hide
Query:  LELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPSYCMLKIRLEEGQEGTI
        ++LKPLLNHLK AYLGENDTL ++IS  L  AEEK +LNMLKRHKKAI WTL  IQGISPSYCM KIRLE+ QEGTI
Subjt:  LELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPSYCMLKIRLEEGQEGTI

TYJ96947.1 integrase [Cucumis melo var. makuwa]1.3e-3170.37Show/hide
Query:  EDLDYIIEEVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGIS
        ++ +YI+EEVNVVS E+K + LDL+TKGEKKTK S+EEPPELELKP LNHLK AYLG NDTLSIIIS  L   EEK LLN+LK HKKA  WTLA+IQGIS
Subjt:  EDLDYIIEEVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGIS

Query:  PSYCMLKI
        PS   +K+
Subjt:  PSYCMLKI

WP_217833196.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]1.3e-2560.36Show/hide
Query:  EVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPSYCMLKI
        E+ ++S+    + LDL  +  +KTKPS+EEPP LELK L  HLK AYLGE  TL +IISA L T  EKALL +LK H KAI WTLA+I+GISPSYCM KI
Subjt:  EVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPSYCMLKI

Query:  RLEEGQEGTIQ
        RLEEG++G+++
Subjt:  RLEEGQEGTIQ

TrEMBL top hitse value%identityAlignment
A0A5A7UF79 Uncharacterized protein5.7e-3870.83Show/hide
Query:  EDLDYIIEEVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGIS
        +D  YI++EVNVVS E+K + LDL+ KGEKKTKPS+EEPPELELK L NHLK  YL ENDTL + IS  L  A+EK LLNMLKRHKK I WTL +IQGIS
Subjt:  EDLDYIIEEVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGIS

Query:  PSYCMLKIRLEEGQEGTIQF
         SYCM K+RLEEGQE TIQF
Subjt:  PSYCMLKIRLEEGQEGTIQF

A0A5D3BC69 Uncharacterized protein1.2e-2476.62Show/hide
Query:  LELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPSYCMLKIRLEEGQEGTI
        ++LKPLLNHLK AYLGENDTL ++IS  L  AEEK +LNMLKRHKKAI WTL  IQGISPSYCM KIRLE+ QEGTI
Subjt:  LELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPSYCMLKIRLEEGQEGTI

A0A5D3BCU9 Integrase6.1e-3270.37Show/hide
Query:  EDLDYIIEEVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGIS
        ++ +YI+EEVNVVS E+K + LDL+TKGEKKTK S+EEPPELELKP LNHLK AYLG NDTLSIIIS  L   EEK LLN+LK HKKA  WTLA+IQGIS
Subjt:  EDLDYIIEEVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGIS

Query:  PSYCMLKI
        PS   +K+
Subjt:  PSYCMLKI

A0A5D3BM57 Uncharacterized protein7.4e-3067.92Show/hide
Query:  VSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPSYCMLKIRLEE
        +S E+K +PLDL+TK EKKTKPS+EEPPELELKPL NHLK AYLGENDTL + I A L   +EKALL +LKR KK  RWTL +IQGIS SY + KI+L+E
Subjt:  VSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPSYCMLKIRLEE

Query:  GQEGTI
        GQ  TI
Subjt:  GQEGTI

A0A5D3DNA6 Uncharacterized protein8.0e-2464.95Show/hide
Query:  IIEEVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPS
        ++EEVNVVSD RK +PLDL+TKG KK K S++ PP+LELK L  HL  AYLGENDTL +II A L+  EEK L+ MLK HKKAI WTL +IQ IS S
Subjt:  IIEEVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATCTTGATTACATTATAGAAGAAGTGAACGTCGTATCTGACGAGAGGAAGTTAAAGCCTTTGGATCTGAAAACCAAAGGCGAGAAGAAGACCAAGCCATCAGT
TGAAGAACCACCAGAGTTAGAGCTAAAGCCTTTACTCAACCACCTGAAAAATGCATATTTGGGGGAGAATGATACTCTGTCCATCATCATCTCCGCCCAGTTGCACACCG
CTGAAGAAAAGGCATTATTAAATATGCTAAAACGCCATAAGAAGGCGATACGATGGACCCTTGCGAATATTCAAGGTATAAGCCCATCCTATTGCATGCTTAAAATCAGG
TTGGAAGAAGGTCAAGAGGGCACCATTCAGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATCTTGATTACATTATAGAAGAAGTGAACGTCGTATCTGACGAGAGGAAGTTAAAGCCTTTGGATCTGAAAACCAAAGGCGAGAAGAAGACCAAGCCATCAGT
TGAAGAACCACCAGAGTTAGAGCTAAAGCCTTTACTCAACCACCTGAAAAATGCATATTTGGGGGAGAATGATACTCTGTCCATCATCATCTCCGCCCAGTTGCACACCG
CTGAAGAAAAGGCATTATTAAATATGCTAAAACGCCATAAGAAGGCGATACGATGGACCCTTGCGAATATTCAAGGTATAAGCCCATCCTATTGCATGCTTAAAATCAGG
TTGGAAGAAGGTCAAGAGGGCACCATTCAGTTCTAA
Protein sequenceShow/hide protein sequence
MEDLDYIIEEVNVVSDERKLKPLDLKTKGEKKTKPSVEEPPELELKPLLNHLKNAYLGENDTLSIIISAQLHTAEEKALLNMLKRHKKAIRWTLANIQGISPSYCMLKIR
LEEGQEGTIQF