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PI0021698 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021698
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPhotosystem II reaction center Psb28 protein
Genome locationchr11:1146424..1146768
RNA-Seq ExpressionPI0021698
SyntenyPI0021698
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
InterPro domainsIPR005610 - Photosystem II Psb28, class 1
IPR038676 - Photosystem II Psb28, class 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459971.1 PREDICTED: photosystem II reaction center PSB28 protein, chloroplastic [Cucumis melo]7.4e-58100Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYSNANGLQFVKK
Subjt:  ERYSNANGLQFVKK

XP_022157494.1 photosystem II reaction center Psb28 protein [Momordica charantia]8.1e-5797.37Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MVQPKIQFIQGTDEQTVPDVRLTKSRDG+NGMAIFRF+QPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKF+NGKPAGIEAKYVMRTPREWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYSNANGLQFVKK
Subjt:  ERYSNANGLQFVKK

XP_023005079.1 photosystem II reaction center PSB28 protein, chloroplastic-like [Cucurbita maxima]3.7e-5798.25Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIF+FD+PSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYSNANGLQFVKK
Subjt:  ERYSNANGLQFVKK

XP_023514182.1 photosystem II reaction center PSB28 protein, chloroplastic-like [Cucurbita pepo subsp. pepo]1.1e-5697.37Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MV+PKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIF+FD+PSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYSNANGLQFVKK
Subjt:  ERYSNANGLQFVKK

XP_038875127.1 photosystem II reaction center Psb28 protein [Benincasa hispida]7.4e-58100Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYSNANGLQFVKK
Subjt:  ERYSNANGLQFVKK

TrEMBL top hitse value%identityAlignment
A0A1S3CCN2 Photosystem II reaction center Psb28 protein3.6e-58100Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYSNANGLQFVKK
Subjt:  ERYSNANGLQFVKK

A0A5A7TA18 Photosystem II reaction center Psb28 protein3.6e-58100Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYSNANGLQFVKK
Subjt:  ERYSNANGLQFVKK

A0A6J1DWM5 Photosystem II reaction center Psb28 protein3.9e-5797.37Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MVQPKIQFIQGTDEQTVPDVRLTKSRDG+NGMAIFRF+QPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKF+NGKPAGIEAKYVMRTPREWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYSNANGLQFVKK
Subjt:  ERYSNANGLQFVKK

A0A6J1H6H6 Photosystem II reaction center Psb28 protein5.1e-5797.37Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MV+PKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIF+FD+PSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYSNANGLQFVKK
Subjt:  ERYSNANGLQFVKK

A0A6J1KY50 Photosystem II reaction center Psb28 protein1.8e-5798.25Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIF+FD+PSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYSNANGLQFVKK
Subjt:  ERYSNANGLQFVKK

SwissProt top hitse value%identityAlignment
A0T0H5 Photosystem II reaction center Psb28 protein9.1e-3557.52Show/hide
Query:  VQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFD-SSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        ++ KIQFI+G DE+ +PDVRLT+S+DG+ G A FRF  P++ D ++A+ G+ITG Y+IDEEG++++ DVNA+F+NGKP  IE+ Y+M++P  WDRFMRFM
Subjt:  VQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFD-SSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVK
        ERY   NGL F K
Subjt:  ERYSNANGLQFVK

O78418 Photosystem II reaction center Psb28 protein4.5e-3461.47Show/hide
Query:  IQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEV-GDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYS
        IQFIQG +E  +PDVRLT+SRDG+ G A FRF  P V ++ + V G+ITG Y+IDEEG + + DVNA+F+NGKP GIEA Y+M++  +WDRFMRFMERYS
Subjt:  IQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEV-GDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYS

Query:  NANGLQFVK
          NGL F K
Subjt:  NANGLQFVK

P49508 Photosystem II reaction center Psb28 protein4.1e-3559.29Show/hide
Query:  VQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFD-SSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        ++ KIQFI+G DE+ +PDVRLT+SRDG+ G A FRF  P++ D S+A+ G+ITG Y+ID+EG +++ DVNA+FINGKP  IE+ Y+M++P  WDRFMRFM
Subjt:  VQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFD-SSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVK
        ERY  +NGL F K
Subjt:  ERYSNANGLQFVK

Q0JG75 Photosystem II reaction center PSB28 protein, chloroplastic8.8e-5489.29Show/hide
Query:  QPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMER
        +P IQFIQGTDEQT+PDVRLTKSRDGTNG+AIF FDQPSVFDSSAE+GDITGFYMID+EGV+QSVDV+AKF+NGKPA IEAKYVMRTPREWDRFMRFMER
Subjt:  QPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMER

Query:  YSNANGLQFVKK
        YS ANGLQFVKK
Subjt:  YSNANGLQFVKK

Q8W0Y8 Photosystem II reaction center PSB28 protein, chloroplastic5.9e-5078.95Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MV+P +QFIQGTDE T+PDV+LT+SRDG+NGMA+F FDQPSVFDSS EVG+ITG YMIDEEGVIQS DVNA+F+NGKP GI AK++MR+P+EWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYS+ NGLQFVKK
Subjt:  ERYSNANGLQFVKK

Arabidopsis top hitse value%identityAlignment
AT4G28660.1 photosystem II reaction center PSB28 protein4.2e-5178.95Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MV+P +QFIQGTDE T+PDV+LT+SRDG+NGMA+F FDQPSVFDSS EVG+ITG YMIDEEGVIQS DVNA+F+NGKP GI AK++MR+P+EWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYS+ NGLQFVKK
Subjt:  ERYSNANGLQFVKK

AT4G28660.2 photosystem II reaction center PSB28 protein4.2e-5178.95Show/hide
Query:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM
        MV+P +QFIQGTDE T+PDV+LT+SRDG+NGMA+F FDQPSVFDSS EVG+ITG YMIDEEGVIQS DVNA+F+NGKP GI AK++MR+P+EWDRFMRFM
Subjt:  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFM

Query:  ERYSNANGLQFVKK
        ERYS+ NGLQFVKK
Subjt:  ERYSNANGLQFVKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGCCCAAGATTCAGTTCATCCAGGGCACGGACGAGCAGACAGTGCCGGATGTGCGGCTCACCAAATCCCGAGACGGAACCAACGGAATGGCCATTTTTAGGTT
CGATCAGCCGTCGGTGTTCGATTCATCGGCGGAGGTTGGGGATATCACCGGATTCTATATGATTGATGAAGAAGGGGTGATTCAATCGGTTGATGTGAATGCGAAGTTCA
TCAATGGGAAACCGGCGGGAATTGAGGCGAAGTATGTGATGAGGACTCCGAGGGAATGGGATAGGTTCATGAGATTCATGGAGCGATACTCCAATGCCAATGGCTTGCAA
TTTGTCAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAGCCCAAGATTCAGTTCATCCAGGGCACGGACGAGCAGACAGTGCCGGATGTGCGGCTCACCAAATCCCGAGACGGAACCAACGGAATGGCCATTTTTAGGTT
CGATCAGCCGTCGGTGTTCGATTCATCGGCGGAGGTTGGGGATATCACCGGATTCTATATGATTGATGAAGAAGGGGTGATTCAATCGGTTGATGTGAATGCGAAGTTCA
TCAATGGGAAACCGGCGGGAATTGAGGCGAAGTATGTGATGAGGACTCCGAGGGAATGGGATAGGTTCATGAGATTCATGGAGCGATACTCCAATGCCAATGGCTTGCAA
TTTGTCAAGAAATGA
Protein sequenceShow/hide protein sequence
MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQ
FVKK