; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021707 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021707
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr07:2250975..2251819
RNA-Seq ExpressionPI0021707
SyntenyPI0021707
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044544.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]2.0e-9067.4Show/hide
Query:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS
        M+ VR+VWYHNL QEL ILND LFKFPVIAMDTEFPGFLRST RGAPEEH YQDLKFN+NHLKILQL LTLMDENEHVGLSW FTFSDF EQTD SS TS
Subjt:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS

Query:  IQFLKN-KGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGL
        IQ+LKN KGF+FKKQR++GIP  EFRR+FLPIFSSNRITKWITFHGIYDVAY                F++                          LGL
Subjt:  IQFLKN-KGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGL

Query:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKT----VPYYSNSLSF
        K++A+LL+VNDTI NGGS+SLLIAL YAKMKK   LKFS E  DGF YGFHYRIRGY+T    + YY NSL F
Subjt:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKT----VPYYSNSLSF

KAE8649090.1 hypothetical protein Csa_014788 [Cucumis sativus]3.4e-8262.87Show/hide
Query:  VRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQF
        VR+VWYHNL QELAILNDHLFKFPVI MDTEFPGFLRSTPRGAP+EHLYQDLKFNVNHLKILQL LTLMDENEHVGLSW FTFSDF EQTDLSS TS+Q+
Subjt:  VRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQF

Query:  LK-NKGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGLKKI
        LK NKGF+FKKQR++GIP  EFRR+FLPIFSSNRITKWITFHGIYDVAY                F++                          LGLK++
Subjt:  LK-NKGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGLKKI

Query:  AKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYG----FHYRIRGYKTVPYYSNSLSFHN
        A+LLDVNDT+ +GGS+SLLIAL Y KMKK   LK S EN  GF Y      H  ++G   + ++S++  ++N
Subjt:  AKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYG----FHYRIRGYKTVPYYSNSLSFHN

XP_004151393.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]4.9e-8968.73Show/hide
Query:  VRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQF
        VR+VWYHNL QELAILNDHLFKFPVI MDTEFPGFLRSTPRGAP+EHLYQDLKFNVNHLKILQL LTLMDENEHVGLSW FTFSDF EQTDLSS TS+Q+
Subjt:  VRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQF

Query:  LK-NKGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGLKKI
        LK NKGF+FKKQR++GIP  EFRR+FLPIFSSNRITKWITFHGIYDVAY                F++                          LGLK++
Subjt:  LK-NKGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGLKKI

Query:  AKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKTVPY
        A+LLDVNDT+ +GGS+SLLIAL Y KMKK   LK S EN  GF YGF YRIRGYKT  Y
Subjt:  AKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKTVPY

XP_008454486.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]1.4e-9167.77Show/hide
Query:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS
        M+ VRKVWYHN  QELAILND LFKFPVIAMDTEFPGFLRSTPRGAPEEH YQDLKFN+NHLKILQL LTLMDENEHVGLSW FTFSDF EQTD SS TS
Subjt:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS

Query:  IQFLKN-KGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGL
        IQ+LKN KGF+FKKQR++GIP  EFRR+FLPIFSSNRITKWITFHGIYDVAY                F++                          LGL
Subjt:  IQFLKN-KGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGL

Query:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKT----VPYYSNSLSF
        K++A+LL+VNDTI NGGS+SLLIAL YAKMKK   LKFS E  DGF YGF+YRIRGY+T    + YY NSL F
Subjt:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKT----VPYYSNSLSF

XP_008466654.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]2.6e-7465.81Show/hide
Query:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS
        M+ VR+VWYHNL QELAILND LFK P+I MDTEF GFLRSTPRGAPEEHLYQDLKFN+NHLKILQL LTLMD+NEHVGLSW FTFSDF EQTD SS TS
Subjt:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS

Query:  IQFLK-NKGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAYF------------------------------------------SVLGL
        IQ+LK NK F+FKK R+  IP  EFRR+FLPIFSSNRITKWITFHGIYDVAY                                             LGL
Subjt:  IQFLK-NKGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAYF------------------------------------------SVLGL

Query:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKML
        K++A+LL+VNDTI NGGS+SLLIAL Y KMKKML
Subjt:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKML

TrEMBL top hitse value%identityAlignment
A0A0A0KTU4 Poly(A)-specific ribonuclease2.4e-8968.73Show/hide
Query:  VRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQF
        VR+VWYHNL QELAILNDHLFKFPVI MDTEFPGFLRSTPRGAP+EHLYQDLKFNVNHLKILQL LTLMDENEHVGLSW FTFSDF EQTDLSS TS+Q+
Subjt:  VRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQF

Query:  LK-NKGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGLKKI
        LK NKGF+FKKQR++GIP  EFRR+FLPIFSSNRITKWITFHGIYDVAY                F++                          LGLK++
Subjt:  LK-NKGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGLKKI

Query:  AKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKTVPY
        A+LLDVNDT+ +GGS+SLLIAL Y KMKK   LK S EN  GF YGF YRIRGYKT  Y
Subjt:  AKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKTVPY

A0A1S3BY95 Poly(A)-specific ribonuclease6.6e-9267.77Show/hide
Query:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS
        M+ VRKVWYHN  QELAILND LFKFPVIAMDTEFPGFLRSTPRGAPEEH YQDLKFN+NHLKILQL LTLMDENEHVGLSW FTFSDF EQTD SS TS
Subjt:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS

Query:  IQFLKN-KGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGL
        IQ+LKN KGF+FKKQR++GIP  EFRR+FLPIFSSNRITKWITFHGIYDVAY                F++                          LGL
Subjt:  IQFLKN-KGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGL

Query:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKT----VPYYSNSLSF
        K++A+LL+VNDTI NGGS+SLLIAL YAKMKK   LKFS E  DGF YGF+YRIRGY+T    + YY NSL F
Subjt:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKT----VPYYSNSLSF

A0A5A7T5A7 Putative CCR4-associated factor 1-like protein 81.3e-7465.81Show/hide
Query:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS
        M+ VR+VWYHNL QELAILND LFK P+I MDTEF GFLRSTPRGAPEEHLYQDLKFN+NHLKILQL LTLMD+NEHVGLSW FTFSDF EQTD SS TS
Subjt:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS

Query:  IQFLK-NKGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAYF------------------------------------------SVLGL
        IQ+LK NK F+FKK R+  IP  EFRR+FLPIFSSNRITKWITFHGIYDVAY                                             LGL
Subjt:  IQFLK-NKGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAYF------------------------------------------SVLGL

Query:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKML
        K++A+LL+VNDTI NGGS+SLLIAL Y KMKKML
Subjt:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKML

A0A5A7TN62 Poly(A)-specific ribonuclease9.6e-9167.4Show/hide
Query:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS
        M+ VR+VWYHNL QEL ILND LFKFPVIAMDTEFPGFLRST RGAPEEH YQDLKFN+NHLKILQL LTLMDENEHVGLSW FTFSDF EQTD SS TS
Subjt:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS

Query:  IQFLKN-KGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGL
        IQ+LKN KGF+FKKQR++GIP  EFRR+FLPIFSSNRITKWITFHGIYDVAY                F++                          LGL
Subjt:  IQFLKN-KGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGL

Query:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKT----VPYYSNSLSF
        K++A+LL+VNDTI NGGS+SLLIAL YAKMKK   LKFS E  DGF YGFHYRIRGY+T    + YY NSL F
Subjt:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKT----VPYYSNSLSF

A0A5D3D333 Poly(A)-specific ribonuclease6.6e-9267.77Show/hide
Query:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS
        M+ VRKVWYHN  QELAILND LFKFPVIAMDTEFPGFLRSTPRGAPEEH YQDLKFN+NHLKILQL LTLMDENEHVGLSW FTFSDF EQTD SS TS
Subjt:  MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTS

Query:  IQFLKN-KGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGL
        IQ+LKN KGF+FKKQR++GIP  EFRR+FLPIFSSNRITKWITFHGIYDVAY                F++                          LGL
Subjt:  IQFLKN-KGFDFKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAY----------------FSV--------------------------LGL

Query:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKT----VPYYSNSLSF
        K++A+LL+VNDTI NGGS+SLLIAL YAKMKK   LKFS E  DGF YGF+YRIRGY+T    + YY NSL F
Subjt:  KKIAKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKT----VPYYSNSLSF

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 51.7e-2342.18Show/hide
Query:  KVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLK
        +VW  N   E+  + D L     IA+DTEFPG L+ TP  A +E  Y+D+KFNV++  ++QL LTL  +   +  +WE   SDF E   L +  SI FLK
Subjt:  KVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLK

Query:  NKGFDFKKQRREGIPLVEFRRSFLPIFSSNR-ITKWITFHGIYDVAY
        N G D  K R EGI + EF   F  I +      +W+TF G YD AY
Subjt:  NKGFDFKKQRREGIPLVEFRRSFLPIFSSNR-ITKWITFHGIYDVAY

Q9C6M9 Putative CCR4-associated factor 1 homolog 47.0e-2241.89Show/hide
Query:  KVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLK
        +VW  N   E+  + D L  F  IA+DTEFPG L+ TP  A EE  Y+D+KFNV++  ++QL  TL D    +  +WE   SDF E     +  SI FLK
Subjt:  KVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLK

Query:  NKGFDFKKQRREGIPLVEFRRSFLPIF--SSNRITKWITFHGIYDVAY
        + G +  K   EGI + EF R F  I      +IT W+ F G YD AY
Subjt:  NKGFDFKKQRREGIPLVEFRRSFLPIF--SSNRITKWITFHGIYDVAY

Q9LXM2 Probable CCR4-associated factor 1 homolog 95.3e-2228.19Show/hide
Query:  IVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFL-RSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENE---------HVGLSWEFTFSDFGEQ
        + R+VW  NL  E  ++++ +  +P I+MDTEFPG + +S  R    + LY  LK NV+ L ++Q+ LTL D N          H G  WEF F DF   
Subjt:  IVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFL-RSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENE---------HVGLSWEFTFSDFGEQ

Query:  TDLSSSTSIQFLKNKGFDFKKQRREGIPLVEFRRSFLPI-FSSNRITKWITFHGIYDVAYFSVL------------------------------------
         D  +  SI+ L+ +G DF++  R+G+    F    +      N    W+TFH  YD  Y   +                                    
Subjt:  TDLSSSTSIQFLKNKGFDFKKQRREGIPLVEFRRSFLPI-FSSNRITKWITFHGIYDVAYFSVL------------------------------------

Query:  -----GLKKIAKLLDVNDTI---INGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYG
             GL ++A+ L+VN  +      GS+SLL    + +M+ +  ++  PE   G  YG
Subjt:  -----GLKKIAKLLDVNDTI---INGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYG

Q9LXM4 Putative CCR4-associated factor 1 homolog 84.4e-2442.34Show/hide
Query:  LAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLKNKGFDFKKQR
        ++++ D L  +  IA+DTEFP  LR T + A +E  Y D+ F+V+  K++QL LTL D N  +G +WE  FSDFG   D  +  SI+FL+  G D +K R
Subjt:  LAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLKNKGFDFKKQR

Query:  REGIPLVE-FRRSFLPIFSSNRITKWITFHGIYDVAY
         EGI +   F   F  +  + R   W+TFHG YD+AY
Subjt:  REGIPLVE-FRRSFLPIFSSNRITKWITFHGIYDVAY

Q9SHJ0 Probable CCR4-associated factor 1 homolog 11.5e-2430.9Show/hide
Query:  IVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQ
        + R+VW  N+ +E+A + + L +FP+IA DTE+PG +  T   +  +  Y+ +K NV + K++Q   TL +    +G  WE  FS+FG+ +D  +  SI+
Subjt:  IVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQ

Query:  FLKNKGFDFKKQRREGIPLVEFRRSFLP----IFSSNRITKWITFHGIYDVAYF-----------------------------------------SVLGL
        FL+  G D +K R EG+ +  F   F P    +F S +  +++TF G YD AYF                                           LGL
Subjt:  FLKNKGFDFKKQRREGIPLVEFRRSFLP----IFSSNRITKWITFHGIYDVAYF-----------------------------------------SVLGL

Query:  KKIAKLLDVN--DTIINGGSNSLLIALVYAKMK
         K+A+LL +       + GS+SL+ ALV+ K+K
Subjt:  KKIAKLLDVN--DTIINGGSNSLLIALVYAKMK

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-2530.9Show/hide
Query:  IVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQ
        + R+VW  N+ +E+A + + L +FP+IA DTE+PG +  T   +  +  Y+ +K NV + K++Q   TL +    +G  WE  FS+FG+ +D  +  SI+
Subjt:  IVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQ

Query:  FLKNKGFDFKKQRREGIPLVEFRRSFLP----IFSSNRITKWITFHGIYDVAYF-----------------------------------------SVLGL
        FL+  G D +K R EG+ +  F   F P    +F S +  +++TF G YD AYF                                           LGL
Subjt:  FLKNKGFDFKKQRREGIPLVEFRRSFLP----IFSSNRITKWITFHGIYDVAYF-----------------------------------------SVLGL

Query:  KKIAKLLDVN--DTIINGGSNSLLIALVYAKMK
         K+A+LL +       + GS+SL+ ALV+ K+K
Subjt:  KKIAKLLDVN--DTIINGGSNSLLIALVYAKMK

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.9e-2341.89Show/hide
Query:  KVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLK
        +VW  N   E+  + D L  F  IA+DTEFPG L+ TP  A EE  Y+D+KFNV++  ++QL  TL D    +  +WE   SDF E     +  SI FLK
Subjt:  KVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLK

Query:  NKGFDFKKQRREGIPLVEFRRSFLPIF--SSNRITKWITFHGIYDVAY
        + G +  K   EGI + EF R F  I      +IT W+ F G YD AY
Subjt:  NKGFDFKKQRREGIPLVEFRRSFLPIF--SSNRITKWITFHGIYDVAY

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-2442.18Show/hide
Query:  KVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLK
        +VW  N   E+  + D L     IA+DTEFPG L+ TP  A +E  Y+D+KFNV++  ++QL LTL  +   +  +WE   SDF E   L +  SI FLK
Subjt:  KVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLK

Query:  NKGFDFKKQRREGIPLVEFRRSFLPIFSSNR-ITKWITFHGIYDVAY
        N G D  K R EGI + EF   F  I +      +W+TF G YD AY
Subjt:  NKGFDFKKQRREGIPLVEFRRSFLPIFSSNR-ITKWITFHGIYDVAY

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.1e-2542.34Show/hide
Query:  LAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLKNKGFDFKKQR
        ++++ D L  +  IA+DTEFP  LR T + A +E  Y D+ F+V+  K++QL LTL D N  +G +WE  FSDFG   D  +  SI+FL+  G D +K R
Subjt:  LAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLKNKGFDFKKQR

Query:  REGIPLVE-FRRSFLPIFSSNRITKWITFHGIYDVAY
         EGI +   F   F  +  + R   W+TFHG YD+AY
Subjt:  REGIPLVE-FRRSFLPIFSSNRITKWITFHGIYDVAY

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.8e-2328.19Show/hide
Query:  IVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFL-RSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENE---------HVGLSWEFTFSDFGEQ
        + R+VW  NL  E  ++++ +  +P I+MDTEFPG + +S  R    + LY  LK NV+ L ++Q+ LTL D N          H G  WEF F DF   
Subjt:  IVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFL-RSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENE---------HVGLSWEFTFSDFGEQ

Query:  TDLSSSTSIQFLKNKGFDFKKQRREGIPLVEFRRSFLPI-FSSNRITKWITFHGIYDVAYFSVL------------------------------------
         D  +  SI+ L+ +G DF++  R+G+    F    +      N    W+TFH  YD  Y   +                                    
Subjt:  TDLSSSTSIQFLKNKGFDFKKQRREGIPLVEFRRSFLPI-FSSNRITKWITFHGIYDVAYFSVL------------------------------------

Query:  -----GLKKIAKLLDVNDTI---INGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYG
             GL ++A+ L+VN  +      GS+SLL    + +M+ +  ++  PE   G  YG
Subjt:  -----GLKKIAKLLDVNDTI---INGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATCGTTAGAAAAGTTTGGTATCATAATCTCTTCCAAGAATTGGCCATTCTCAATGACCATCTTTTCAAGTTTCCAGTGATCGCAATGGACACTGAGTTCCCTGG
TTTTCTCCGATCCACTCCGAGAGGTGCTCCCGAAGAACATCTCTACCAAGATTTGAAGTTCAATGTAAACCATTTGAAAATTCTTCAATTGACCCTCACTCTGATGGATG
AGAATGAGCATGTTGGGTTGTCTTGGGAGTTCACTTTTTCTGATTTTGGTGAACAAACAGACCTCTCTAGTTCTACATCAATCCAATTTTTGAAGAACAAAGGGTTTGAT
TTCAAGAAACAGAGGAGAGAAGGAATTCCATTGGTTGAATTTCGACGTTCATTTCTGCCTATCTTTTCTAGCAATCGAATAACCAAATGGATCACATTTCATGGCATTTA
CGACGTTGCTTATTTCTCAGTACTTGGACTTAAGAAAATTGCCAAGTTACTTGATGTGAACGACACTATTATCAATGGTGGTTCGAATAGTTTGTTGATAGCTTTGGTGT
ATGCAAAGATGAAAAAGATGCTCATGCTCAAGTTTTCGCCAGAGAACATTGATGGATTCTTTTATGGTTTTCACTATAGAATTCGAGGATATAAAACAGTACCATATTAC
TCAAATTCATTATCCTTTCACAATTTTCAATTCAACCATCCTTTTAAGCAAAATCGTTTTGCTGCTTCAAAATCTCATTCCTATTCTATTATTGATTCTTCACTAATAAT
GTGTTCGAATCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATATCGTTAGAAAAGTTTGGTATCATAATCTCTTCCAAGAATTGGCCATTCTCAATGACCATCTTTTCAAGTTTCCAGTGATCGCAATGGACACTGAGTTCCCTGG
TTTTCTCCGATCCACTCCGAGAGGTGCTCCCGAAGAACATCTCTACCAAGATTTGAAGTTCAATGTAAACCATTTGAAAATTCTTCAATTGACCCTCACTCTGATGGATG
AGAATGAGCATGTTGGGTTGTCTTGGGAGTTCACTTTTTCTGATTTTGGTGAACAAACAGACCTCTCTAGTTCTACATCAATCCAATTTTTGAAGAACAAAGGGTTTGAT
TTCAAGAAACAGAGGAGAGAAGGAATTCCATTGGTTGAATTTCGACGTTCATTTCTGCCTATCTTTTCTAGCAATCGAATAACCAAATGGATCACATTTCATGGCATTTA
CGACGTTGCTTATTTCTCAGTACTTGGACTTAAGAAAATTGCCAAGTTACTTGATGTGAACGACACTATTATCAATGGTGGTTCGAATAGTTTGTTGATAGCTTTGGTGT
ATGCAAAGATGAAAAAGATGCTCATGCTCAAGTTTTCGCCAGAGAACATTGATGGATTCTTTTATGGTTTTCACTATAGAATTCGAGGATATAAAACAGTACCATATTAC
TCAAATTCATTATCCTTTCACAATTTTCAATTCAACCATCCTTTTAAGCAAAATCGTTTTGCTGCTTCAAAATCTCATTCCTATTCTATTATTGATTCTTCACTAATAAT
GTGTTCGAATCTTTAG
Protein sequenceShow/hide protein sequence
MNIVRKVWYHNLFQELAILNDHLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNVNHLKILQLTLTLMDENEHVGLSWEFTFSDFGEQTDLSSSTSIQFLKNKGFD
FKKQRREGIPLVEFRRSFLPIFSSNRITKWITFHGIYDVAYFSVLGLKKIAKLLDVNDTIINGGSNSLLIALVYAKMKKMLMLKFSPENIDGFFYGFHYRIRGYKTVPYY
SNSLSFHNFQFNHPFKQNRFAASKSHSYSIIDSSLIMCSNL