; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021716 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021716
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description40S ribosomal protein S13-like
Genome locationchr05:11661599..11662028
RNA-Seq ExpressionPI0021716
SyntenyPI0021716
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055739.1 uncharacterized protein E6C27_scaffold181G001240 [Cucumis melo var. makuwa]6.2e-0436.17Show/hide
Query:  EKIGSSKIVKEKKNPIKEEEGPLKRAMSKAFTKISCHSKSSVGSISLGEPIISGDDVKRIDEKGLEEKPCHLDIGSVDYIVAVGTIFVDDGECP
        + +G  K++  +     +EE   +    K++ K S HS+SS+GSI++ +     D V   + KG+E KPC L IGS++ IVAV T+  D+  CP
Subjt:  EKIGSSKIVKEKKNPIKEEEGPLKRAMSKAFTKISCHSKSSVGSISLGEPIISGDDVKRIDEKGLEEKPCHLDIGSVDYIVAVGTIFVDDGECP
KAA0055740.1 uncharacterized protein E6C27_scaffold181G001250 [Cucumis melo var. makuwa]6.2e-0436.17Show/hide
Query:  EKIGSSKIVKEKKNPIKEEEGPLKRAMSKAFTKISCHSKSSVGSISLGEPIISGDDVKRIDEKGLEEKPCHLDIGSVDYIVAVGTIFVDDGECP
        + +G  K++  +     +EE   +    K++ K S HS+SS+GSI++ +     D V   + KG+E KPC L IGS++ IVAV T+  D+  CP
Subjt:  EKIGSSKIVKEKKNPIKEEEGPLKRAMSKAFTKISCHSKSSVGSISLGEPIISGDDVKRIDEKGLEEKPCHLDIGSVDYIVAVGTIFVDDGECP
TrEMBL top hitse value%identityAlignment
A0A5A7UKS1 Uncharacterized protein3.0e-0436.17Show/hide
Query:  EKIGSSKIVKEKKNPIKEEEGPLKRAMSKAFTKISCHSKSSVGSISLGEPIISGDDVKRIDEKGLEEKPCHLDIGSVDYIVAVGTIFVDDGECP
        + +G  K++  +     +EE   +    K++ K S HS+SS+GSI++ +     D V   + KG+E KPC L IGS++ IVAV T+  D+  CP
Subjt:  EKIGSSKIVKEKKNPIKEEEGPLKRAMSKAFTKISCHSKSSVGSISLGEPIISGDDVKRIDEKGLEEKPCHLDIGSVDYIVAVGTIFVDDGECP
A0A5A7UQI2 Uncharacterized protein3.0e-0436.17Show/hide
Query:  EKIGSSKIVKEKKNPIKEEEGPLKRAMSKAFTKISCHSKSSVGSISLGEPIISGDDVKRIDEKGLEEKPCHLDIGSVDYIVAVGTIFVDDGECP
        + +G  K++  +     +EE   +    K++ K S HS+SS+GSI++ +     D V   + KG+E KPC L IGS++ IVAV T+  D+  CP
Subjt:  EKIGSSKIVKEKKNPIKEEEGPLKRAMSKAFTKISCHSKSSVGSISLGEPIISGDDVKRIDEKGLEEKPCHLDIGSVDYIVAVGTIFVDDGECP
A0A5A7UVK8 40S ribosomal protein S13-like6.7e-0440.91Show/hide
Query:  KIVKEKKNPIKEEEGPLKRAMSKAFTKISCHSKSSVGSISLGEPIISGDDVKRIDEKGLEEKPCHLDIGSVDYIVAVGTIFVDDGECP
        K VK K+  I  +E     ++ K+  K S HS+SS+GSI++   +    D      KG+EE PC L IGS++ IVAV TI  D+  CP
Subjt:  KIVKEKKNPIKEEEGPLKRAMSKAFTKISCHSKSSVGSISLGEPIISGDDVKRIDEKGLEEKPCHLDIGSVDYIVAVGTIFVDDGECP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTGAAAGTGGAGGAGTACCTGAAGATGAAAAGATTGGAAGTTCCAAAATAGTAAAAGAGAAGAAAAACCCGATTAAAGAAGAAGAAGGACCACTAAAGAGAGC
GATGAGCAAAGCATTTACCAAAATTTCTTGTCATTCAAAATCGTCTGTTGGAAGTATCTCACTAGGTGAACCGATAATAAGTGGGGATGATGTTAAGAGGATCGATGAAA
AGGGTTTAGAGGAAAAACCATGCCACTTGGATATAGGATCGGTTGATTATATTGTTGCAGTAGGCACAATATTTGTTGATGATGGAGAATGCCCTATCATTGGAGAAGAT
GTGGGGCAATTCCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGTGAAAGTGGAGGAGTACCTGAAGATGAAAAGATTGGAAGTTCCAAAATAGTAAAAGAGAAGAAAAACCCGATTAAAGAAGAAGAAGGACCACTAAAGAGAGC
GATGAGCAAAGCATTTACCAAAATTTCTTGTCATTCAAAATCGTCTGTTGGAAGTATCTCACTAGGTGAACCGATAATAAGTGGGGATGATGTTAAGAGGATCGATGAAA
AGGGTTTAGAGGAAAAACCATGCCACTTGGATATAGGATCGGTTGATTATATTGTTGCAGTAGGCACAATATTTGTTGATGATGGAGAATGCCCTATCATTGGAGAAGAT
GTGGGGCAATTCCAGTGA
Protein sequenceShow/hide protein sequence
MSCESGGVPEDEKIGSSKIVKEKKNPIKEEEGPLKRAMSKAFTKISCHSKSSVGSISLGEPIISGDDVKRIDEKGLEEKPCHLDIGSVDYIVAVGTIFVDDGECPIIGED
VGQFQ