| GenBank top hits | e value | %identity | Alignment |
|---|
| AOW73471.1 RNA-dependent RNA polymerase 1c2, partial [Cucumis sativus] | 1.4e-120 | 82.2 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
MVNDG+ I NAHTVFA KN KK MS ECIKLAKLFSI V FPKTGVPANLPRNL VHEY DFMDKPNKPTYVSNGV KLFRGVKDVS DVN EIF+R
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
EVATK YDPDMEVDGFE KYDFKLGNLMDYY I TE ELVSGN+L+M KSFDKRNDLEQITFAMKSLRKEVRSWFNENESK TYDDI+DE
Subjt: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFD
YA+AS WY VTYH DYWGCYNEGMQRDHFLSFPWCVADKLIQIKR KM+L+NS+PVSSL HNFD
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFD
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| KAA0046353.1 putative RNA-dependent RNA polymerase 1 [Cucumis melo var. makuwa] | 1.7e-123 | 83.21 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
MVNDGL I NAHTVFA KNPKK MSAECIKLAKLFSI V F KTGVPANLPRNL VHEY DFMDKP+KPTYVSNGV KLFRGVKDVS DVN EIF+R
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
EVAT+CYDPDMEVDGFE KYDFKLGNLMDYY I TE ELVSGNIL+M KSFDKRNDLEQITFAMKSLRKEVRSWFNENE+KS YDDIKDE
Subjt: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFDEVSL
YARAS WYCVTYH DYWGCYNEG QRDHFLSFPWCVADKLI+IKR+KMSLRNS P+SSLLHNFD V+L
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFDEVSL
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| TYK30517.1 putative RNA-dependent RNA polymerase 1 [Cucumis melo var. makuwa] | 1.7e-123 | 83.21 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
MVNDGL I NAHTVFA KNPKK MSAECIKLAKLFSI V F KTGVPANLPRNL VHEY DFMDKP+KPTYVSNGV KLFRGVKDVS DVN EIF+R
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
EVAT+CYDPDMEVDGFE KYDFKLGNLMDYY I TE ELVSGNIL+M KSFDKRNDLEQITFAMKSLRKEVRSWFNENE+KS YDDIKDE
Subjt: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFDEVSL
YARAS WYCVTYH DYWGCYNEG QRDHFLSFPWCVADKLI+IKR+KMSLRNS P+SSLLHNFD V+L
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFDEVSL
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| XP_008437692.1 PREDICTED: probable RNA-dependent RNA polymerase 1, partial [Cucumis melo] | 1.7e-123 | 83.21 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
MVNDGL I NAHTVFA KNPKK MSAECIKLAKLFSI V F KTGVPANLPRNL VHEY DFMDKP+KPTYVSNGV KLFRGVKDVS DVN EIF+R
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
EVAT+CYDPDMEVDGFE KYDFKLGNLMDYY I TE ELVSGNIL+M KSFDKRNDLEQITFAMKSLRKEVRSWFNENE+KS YDDIKDE
Subjt: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFDEVSL
YARAS WYCVTYH DYWGCYNEG QRDHFLSFPWCVADKLI+IKR+KMSLRNS P+SSLLHNFD V+L
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFDEVSL
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| XP_031741021.1 probable RNA-dependent RNA polymerase 1 [Cucumis sativus] | 1.4e-120 | 82.2 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
MVNDG+ I NAHTVFA KN KK MS ECIKLAKLFSI V FPKTGVPANLPRNL VHEY DFMDKPNKPTYVSNGV KLFRGVKDVS DVN EIF+R
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
EVATK YDPDMEVDGFE KYDFKLGNLMDYY I TE ELVSGN+L+M KSFDKRNDLEQITFAMKSLRKEVRSWFNENESK TYDDI+DE
Subjt: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFD
YA+AS WY VTYH DYWGCYNEGMQRDHFLSFPWCVADKLIQIKR KM+L+NS+PVSSL HNFD
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KRH3 RNA-dependent RNA polymerase | 6.7e-121 | 82.2 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
MVNDG+ I NAHTVFA KN KK MS ECIKLAKLFSI V FPKTGVPANLPRNL VHEY DFMDKPNKPTYVSNGV KLFRGVKDVS DVN EIF+R
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
EVATK YDPDMEVDGFE KYDFKLGNLMDYY I TE ELVSGN+L+M KSFDKRNDLEQITFAMKSLRKEVRSWFNENESK TYDDI+DE
Subjt: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFD
YA+AS WY VTYH DYWGCYNEGMQRDHFLSFPWCVADKLIQIKR KM+L+NS+PVSSL HNFD
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFD
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| A0A1D8RK46 RNA-dependent RNA polymerase (Fragment) | 6.7e-121 | 82.2 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
MVNDG+ I NAHTVFA KN KK MS ECIKLAKLFSI V FPKTGVPANLPRNL VHEY DFMDKPNKPTYVSNGV KLFRGVKDVS DVN EIF+R
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
EVATK YDPDMEVDGFE KYDFKLGNLMDYY I TE ELVSGN+L+M KSFDKRNDLEQITFAMKSLRKEVRSWFNENESK TYDDI+DE
Subjt: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFD
YA+AS WY VTYH DYWGCYNEGMQRDHFLSFPWCVADKLIQIKR KM+L+NS+PVSSL HNFD
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFD
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| A0A1S3AU99 RNA-dependent RNA polymerase | 8.5e-124 | 83.21 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
MVNDGL I NAHTVFA KNPKK MSAECIKLAKLFSI V F KTGVPANLPRNL VHEY DFMDKP+KPTYVSNGV KLFRGVKDVS DVN EIF+R
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
EVAT+CYDPDMEVDGFE KYDFKLGNLMDYY I TE ELVSGNIL+M KSFDKRNDLEQITFAMKSLRKEVRSWFNENE+KS YDDIKDE
Subjt: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFDEVSL
YARAS WYCVTYH DYWGCYNEG QRDHFLSFPWCVADKLI+IKR+KMSLRNS P+SSLLHNFD V+L
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFDEVSL
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| A0A5A7TS25 RNA-dependent RNA polymerase | 8.5e-124 | 83.21 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
MVNDGL I NAHTVFA KNPKK MSAECIKLAKLFSI V F KTGVPANLPRNL VHEY DFMDKP+KPTYVSNGV KLFRGVKDVS DVN EIF+R
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
EVAT+CYDPDMEVDGFE KYDFKLGNLMDYY I TE ELVSGNIL+M KSFDKRNDLEQITFAMKSLRKEVRSWFNENE+KS YDDIKDE
Subjt: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFDEVSL
YARAS WYCVTYH DYWGCYNEG QRDHFLSFPWCVADKLI+IKR+KMSLRNS P+SSLLHNFD V+L
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFDEVSL
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| A0A5D3E365 RNA-dependent RNA polymerase | 8.5e-124 | 83.21 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
MVNDGL I NAHTVFA KNPKK MSAECIKLAKLFSI V F KTGVPANLPRNL VHEY DFMDKP+KPTYVSNGV KLFRGVKDVS DVN EIF+R
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
EVAT+CYDPDMEVDGFE KYDFKLGNLMDYY I TE ELVSGNIL+M KSFDKRNDLEQITFAMKSLRKEVRSWFNENE+KS YDDIKDE
Subjt: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFDEVSL
YARAS WYCVTYH DYWGCYNEG QRDHFLSFPWCVADKLI+IKR+KMSLRNS P+SSLLHNFD V+L
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHNFDEVSL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O82504 RNA-dependent RNA polymerase 2 | 8.1e-31 | 36.8 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
M++D L VI AH V A ++P+K S +C++LA L S V F KTG PA +P L E+ DF+++ KPTY+S VF KL+R VK S E S
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFEK-----------YDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRND------LEQITFAMKSLRKEVRSWFNENESKSTY
+ T YD +E GFE Y KL +LM YY E E+++G IL+ + + R++ ++IT ++K L KE WF + +
Subjt: EVATKCYDPDMEVDGFEK-----------YDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRND------LEQITFAMKSLRKEVRSWFNENESKSTY
Query: DDIKDEYARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIK
+D + + AS WY VTY+ N ++ FLSFPW V D L+ IK
Subjt: DDIKDEYARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIK
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| Q0DXS3 Probable RNA-dependent RNA polymerase 1 | 1.7e-65 | 49.62 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
+VN+ L +I NAH VFA K K S+ CI+LAKLFSI V FPKTGVPA +P L V EY DFM+K +K TY S GV KL+R +K ++ F+R
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
EVA + YD DM VDG+E +YDFKLGNLMD+Y I +E E++SG IL+M K+F K++D + I A++SLRKE RS F+E
Subjt: EVATKCYDPDMEVDGFE-----------KYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHN
A+AS WY VTYH ++WGCYNEG +R HF+SFPWC+ +KL++IK+++ +R P LHN
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLRNSFPVSSLLHN
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| Q5QMN4 Probable RNA-dependent RNA polymerase 4 | 1.3e-04 | 32.47 | Show/hide |
Query: LVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLF
LV + TV ++ KK + + +KL L+ + + PK G N+PR+L V +Y FMD+ P+Y S+ + K++
Subjt: LVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLF
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| Q7XM31 Probable RNA-dependent RNA polymerase 2 | 2.7e-34 | 37.55 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFR---GVKDVSFDVNVLEI
M+ND L I AH + A ++P K S EC++LA L S+ V F KTG PA +PR L EY DFM++ KP Y+SNGV KL+R G + S D L
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFR---GVKDVSFDVNVLEI
Query: FSREVATKCYDPDMEVDG-----------FEKYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRND------LEQITFAMKSLRKEVRSWFNENESK
S + + YDPD+EV G +E Y+ KL LM+YY E E+++GNI R + KR++ ++I A+ +L +E R W + +
Subjt: FSREVATKCYDPDMEVDG-----------FEKYDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRND------LEQITFAMKSLRKEVRSWFNENESK
Query: STYDDIKDEYARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIK
+D AS WY VTYH D + F SFPW D L+ IK
Subjt: STYDDIKDEYARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIK
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| Q9LQV2 RNA-dependent RNA polymerase 1 | 2.3e-70 | 54.58 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
+VND L +I NAHT FA K P K S CI+LAK FS V FPKTGV A +P++L V EY DFM+KP+KPTY S V KLFR VK+ + + ++ F+
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFEK-----------YDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
+VA+K YD DMEVDGFE+ YDFKLGNLMDYY I TE E++SG I+RM+KSF KR D E I A+++LRKE S FN +E + ++E
Subjt: EVATKCYDPDMEVDGFEK-----------YDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLR
A+AS WY VTYH YWG YNEG+ RDHFLSF WCV DKL++IK+ + R
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G14790.1 RNA-dependent RNA polymerase 1 | 1.7e-71 | 54.58 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
+VND L +I NAHT FA K P K S CI+LAK FS V FPKTGV A +P++L V EY DFM+KP+KPTY S V KLFR VK+ + + ++ F+
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFEK-----------YDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
+VA+K YD DMEVDGFE+ YDFKLGNLMDYY I TE E++SG I+RM+KSF KR D E I A+++LRKE S FN +E + ++E
Subjt: EVATKCYDPDMEVDGFEK-----------YDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKSTYDDIKDE
Query: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLR
A+AS WY VTYH YWG YNEG+ RDHFLSF WCV DKL++IK+ + R
Subjt: YARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRKKMSLR
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| AT3G49500.1 RNA-dependent RNA polymerase 6 | 1.2e-26 | 33.58 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDV-SFDVNVLEIFS
+ N+ L I NAH V A ++ M EC+ LA+L + V FPKTG ++P +L Y DFM K + TY SN + +L+R VK+V D S
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDV-SFDVNVLEIFS
Query: REVATKCYDPDMEVDGFEK-----------YDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRND--LEQITFAMKSLRKEVRSWFNE----NESKST
+ + YD +E+ GFE YD +L L+ Y + E E+V+G+I M K K+ E++ + SL+KE R F E +E+ S
Subjt: REVATKCYDPDMEVDGFEK-----------YDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRND--LEQITFAMKSLRKEVRSWFNE----NESKST
Query: YDDIKDEYARASTWYCVTYHQDYWGCYNEGMQRDH-----FLSFPWCVADKLIQIK---RKKMSLRNSFPVSSL
+ +AS WY VTYH ++ E D LSF W AD L +IK R+ S+ ++ PV SL
Subjt: YDDIKDEYARASTWYCVTYHQDYWGCYNEGMQRDH-----FLSFPWCVADKLIQIK---RKKMSLRNSFPVSSL
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| AT4G11130.1 RNA-dependent RNA polymerase 2 | 5.8e-32 | 36.8 | Show/hide |
Query: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
M++D L VI AH V A ++P+K S +C++LA L S V F KTG PA +P L E+ DF+++ KPTY+S VF KL+R VK S E S
Subjt: MVNDGLVVIVNAHTVFAYKNPKKTMSAECIKLAKLFSIVVGFPKTGVPANLPRNLCVHEYLDFMDKPNKPTYVSNGVFRKLFRGVKDVSFDVNVLEIFSR
Query: EVATKCYDPDMEVDGFEK-----------YDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRND------LEQITFAMKSLRKEVRSWFNENESKSTY
+ T YD +E GFE Y KL +LM YY E E+++G IL+ + + R++ ++IT ++K L KE WF + +
Subjt: EVATKCYDPDMEVDGFEK-----------YDFKLGNLMDYYDINTELELVSGNILRMTKSFDKRND------LEQITFAMKSLRKEVRSWFNENESKSTY
Query: DDIKDEYARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIK
+D + + AS WY VTY+ N ++ FLSFPW V D L+ IK
Subjt: DDIKDEYARASTWYCVTYHQDYWGCYNEGMQRDHFLSFPWCVADKLIQIK
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