; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021732 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021732
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr08:18132961..18133599
RNA-Seq ExpressionPI0021732
SyntenyPI0021732
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037436.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.6e-5046.86Show/hide
Query:  MKAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPT
        MKAPWR IIK I WF + SSW I +GE LSFWH  W     L+ ++PRL+ +SK QNATI+E W+ +TN+W+   RRPLN+RE+  W+NLK  L      
Subjt:  MKAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPT

Query:  RGRSFPVWNPSATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV
         G++  +W P+    ++ ASAK+ L S +  T   N    ++T+W SK+PKK KFF+W++ H  INT +VL++ LP TYL PS C L KS +E  +H+F+
Subjt:  RGRSFPVWNPSATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV

Query:  NCHLASS
        +CHL  +
Subjt:  NCHLASS

KAA0058105.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.2e-4745.05Show/hide
Query:  KAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTR
        KAPWRSII NIDWF S   WN+NNG+ +SFW+  W+    L+ ++PRLFA+S ++ ++I++ WN + N+W    RR LN+RE+ +W  +  +L  P   R
Subjt:  KAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTR

Query:  GRSFPVWNPSATKEFSVASAKQALSSHQSDTSGAN-NLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV
        G S P W P + K FS+ASAK  + SHQ D   AN  +   + +W + +P KIKFF+W ++  K+NT+EV++Q +P T L P+ C+LCK  SE   HLF+
Subjt:  GRSFPVWNPSATKEFSVASAKQALSSHQSDTSGAN-NLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV

Query:  NC
         C
Subjt:  NC

KAA0058554.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.9e-4946.08Show/hide
Query:  KAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTR
        KAPWRSII NIDWF S   W++NNG+ +SFW+  W+    L+ ++PRLFA+S ++ ++I++ WN + N+W    RR LN+RE+ +W  +  +L  P   R
Subjt:  KAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTR

Query:  GRSFPVWNPSATKEFSVASAKQALSSHQSDTSGAN-NLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV
        G S P W P + K FS+ASAK  + SHQ D S A+  +   D +W S IP KIKFF+W ++  K+NT+EV++Q +P T L P+ C+LCK +SE   HLF 
Subjt:  GRSFPVWNPSATKEFSVASAKQALSSHQSDTSGAN-NLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV

Query:  NCHL
        +C L
Subjt:  NCHL

TYK00226.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.6e-5046.86Show/hide
Query:  MKAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPT
        MKAPWR IIK I WF + SSW I +GE LSFWH  W     L+ ++PRL+ +SK QNATI+E W+ +TN+W+   RRPLN+RE+  W+NLK  L      
Subjt:  MKAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPT

Query:  RGRSFPVWNPSATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV
         G++  +W P+    ++ ASAK+ L S +  T   N    ++T+W SK+PKK KFF+W++ H  INT +VL++ LP TYL PS C L KS +E  +H+F+
Subjt:  RGRSFPVWNPSATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV

Query:  NCHLASS
        +CHL  +
Subjt:  NCHLASS

TYK11012.1 uncharacterized protein E5676_scaffold874G00540 [Cucumis melo var. makuwa]2.9e-4742.79Show/hide
Query:  KAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTR
        KAPWRSII NIDWF S  SW++NNG+ +SFW+  W+    L+ ++PRLFA++ ++  ++++ WN   N+W+ + RR LN+RE  +W  +   L  P P R
Subjt:  KAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTR

Query:  GRSFPVWNPSATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFVN
        G S P W P   K FS+ASAK  +S     TSG + +   + +W S IP KIKFF+W ++  +I+T+EV++Q +  T L P+ C+LC   +E  +HLF+ 
Subjt:  GRSFPVWNPSATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFVN

Query:  C
        C
Subjt:  C

TrEMBL top hitse value%identityAlignment
A0A5A7T5L3 LINE-1 retrotransposable element ORF2 protein1.7e-5046.86Show/hide
Query:  MKAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPT
        MKAPWR IIK I WF + SSW I +GE LSFWH  W     L+ ++PRL+ +SK QNATI+E W+ +TN+W+   RRPLN+RE+  W+NLK  L      
Subjt:  MKAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPT

Query:  RGRSFPVWNPSATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV
         G++  +W P+    ++ ASAK+ L S +  T   N    ++T+W SK+PKK KFF+W++ H  INT +VL++ LP TYL PS C L KS +E  +H+F+
Subjt:  RGRSFPVWNPSATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV

Query:  NCHLASS
        +CHL  +
Subjt:  NCHLASS

A0A5A7UTS4 LINE-1 retrotransposable element ORF2 protein4.3e-4946.08Show/hide
Query:  KAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTR
        KAPWRSII NIDWF S   W++NNG+ +SFW+  W+    L+ ++PRLFA+S ++ ++I++ WN + N+W    RR LN+RE+ +W  +  +L  P   R
Subjt:  KAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTR

Query:  GRSFPVWNPSATKEFSVASAKQALSSHQSDTSGAN-NLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV
        G S P W P + K FS+ASAK  + SHQ D S A+  +   D +W S IP KIKFF+W ++  K+NT+EV++Q +P T L P+ C+LCK +SE   HLF 
Subjt:  GRSFPVWNPSATKEFSVASAKQALSSHQSDTSGAN-NLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV

Query:  NCHL
        +C L
Subjt:  NCHL

A0A5A7UV84 Reverse transcriptase domain-containing protein1.4e-4742.79Show/hide
Query:  KAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTR
        KAPWRSII NIDWF S  SW++NNG+ +SFW+  W+    L+ ++PRLFA++ ++  ++++ WN   N+W+ + RR LN+RE  +W  +   L  P P R
Subjt:  KAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTR

Query:  GRSFPVWNPSATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFVN
        G S P W P   K FS+ASAK  +S     TSG + +   + +W S IP KIKFF+W ++  +I+T+EV++Q +  T L P+ C+LC   +E  +HLF+ 
Subjt:  GRSFPVWNPSATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFVN

Query:  C
        C
Subjt:  C

A0A5A7UWW1 LINE-1 retrotransposable element ORF2 protein1.1e-4745.05Show/hide
Query:  KAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTR
        KAPWRSII NIDWF S   WN+NNG+ +SFW+  W+    L+ ++PRLFA+S ++ ++I++ WN + N+W    RR LN+RE+ +W  +  +L  P   R
Subjt:  KAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTR

Query:  GRSFPVWNPSATKEFSVASAKQALSSHQSDTSGAN-NLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV
        G S P W P + K FS+ASAK  + SHQ D   AN  +   + +W + +P KIKFF+W ++  K+NT+EV++Q +P T L P+ C+LCK  SE   HLF+
Subjt:  GRSFPVWNPSATKEFSVASAKQALSSHQSDTSGAN-NLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV

Query:  NC
         C
Subjt:  NC

A0A5D3BPP1 LINE-1 retrotransposable element ORF2 protein1.7e-5046.86Show/hide
Query:  MKAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPT
        MKAPWR IIK I WF + SSW I +GE LSFWH  W     L+ ++PRL+ +SK QNATI+E W+ +TN+W+   RRPLN+RE+  W+NLK  L      
Subjt:  MKAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPT

Query:  RGRSFPVWNPSATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV
         G++  +W P+    ++ ASAK+ L S +  T   N    ++T+W SK+PKK KFF+W++ H  INT +VL++ LP TYL PS C L KS +E  +H+F+
Subjt:  RGRSFPVWNPSATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFV

Query:  NCHLASS
        +CHL  +
Subjt:  NCHLASS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTCCTTGGAGATCCATCATAAAAAATATTGACTGGTTTGTAAGTCAATCTTCTTGGAACATCAATAATGGTGAAGGACTCTCCTTCTGGCATGGTATTTGGAA
CGTTCTTAGTCCTTTGGCAAAGTCTTTTCCCAGATTATTTGCAATTTCAAAAAATCAAAATGCTACGATTCAGGAAAACTGGAATATTTCGACTAATGAATGGAGCTTTG
ATCAAAGAAGACCACTAAATGAAAGAGAGATGATTTCCTGGTCTAATCTGAAAAGCTCTTTGTCCAAGCCTGATCCTACCAGAGGAAGAAGTTTCCCAGTGTGGAATCCA
AGTGCAACCAAGGAATTCTCAGTGGCATCAGCTAAACAAGCCCTCAGCAGCCATCAGTCAGATACCAGTGGAGCAAATAATCTTACCCCCTTTGATACCATGTGGAGTTC
AAAGATTCCAAAGAAAATCAAATTCTTCCTTTGGACTATCCTTCATGGAAAAATAAATACTCTTGAAGTGCTCAAACAAAATCTTCCAGGAACTTACTTAAATCCAAGCA
TTTGTATCCTATGCAAATCTCAAAGTGAATGCCAGGATCATCTGTTTGTTAATTGCCATCTTGCCAGCTCTTATGGAAAAATCTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTCCTTGGAGATCCATCATAAAAAATATTGACTGGTTTGTAAGTCAATCTTCTTGGAACATCAATAATGGTGAAGGACTCTCCTTCTGGCATGGTATTTGGAA
CGTTCTTAGTCCTTTGGCAAAGTCTTTTCCCAGATTATTTGCAATTTCAAAAAATCAAAATGCTACGATTCAGGAAAACTGGAATATTTCGACTAATGAATGGAGCTTTG
ATCAAAGAAGACCACTAAATGAAAGAGAGATGATTTCCTGGTCTAATCTGAAAAGCTCTTTGTCCAAGCCTGATCCTACCAGAGGAAGAAGTTTCCCAGTGTGGAATCCA
AGTGCAACCAAGGAATTCTCAGTGGCATCAGCTAAACAAGCCCTCAGCAGCCATCAGTCAGATACCAGTGGAGCAAATAATCTTACCCCCTTTGATACCATGTGGAGTTC
AAAGATTCCAAAGAAAATCAAATTCTTCCTTTGGACTATCCTTCATGGAAAAATAAATACTCTTGAAGTGCTCAAACAAAATCTTCCAGGAACTTACTTAAATCCAAGCA
TTTGTATCCTATGCAAATCTCAAAGTGAATGCCAGGATCATCTGTTTGTTAATTGCCATCTTGCCAGCTCTTATGGAAAAATCTCCTAG
Protein sequenceShow/hide protein sequence
MKAPWRSIIKNIDWFVSQSSWNINNGEGLSFWHGIWNVLSPLAKSFPRLFAISKNQNATIQENWNISTNEWSFDQRRPLNEREMISWSNLKSSLSKPDPTRGRSFPVWNP
SATKEFSVASAKQALSSHQSDTSGANNLTPFDTMWSSKIPKKIKFFLWTILHGKINTLEVLKQNLPGTYLNPSICILCKSQSECQDHLFVNCHLASSYGKIS