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PI0021760 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021760
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr01:7337889..7338364
RNA-Seq ExpressionPI0021760
SyntenyPI0021760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041821.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-3557.32Show/hide
Query:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTAR--------------------------------GQF
        MILVIDD  F+LMEE SP PT+NASQ VK AYD WT  NDKAR+YILASMSD+LSKK+E+MVTAR                                GQ 
Subjt:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTAR--------------------------------GQF

Query:  VRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT
        V +HVLD++++FNV +MNG V DE+SQVS IL+SLSK+FLQF SN  +NKI+YNMTT
Subjt:  VRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT

KAA0051407.1 gag/pol protein [Cucumis melo var. makuwa]9.7e-3568Show/hide
Query:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTARGQFVRKHVLDMMVHFNVAKMNGAVIDEQSQVSIIL
        MILVI DLRF+LMEE SP PT+NASQ+V+ AYD WT TNDKARVYILASMSD+LSKK+E+MVTA             +HFNV +MN  V DE+SQVS IL
Subjt:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTARGQFVRKHVLDMMVHFNVAKMNGAVIDEQSQVSIIL

Query:  ESLSKNFLQFCSNAVMNKIEYNMTT
        +SL K+FLQF SNA MNK+EYNMTT
Subjt:  ESLSKNFLQFCSNAVMNKIEYNMTT

KAA0063887.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-3758.6Show/hide
Query:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTAR--------------------------------GQF
        MILVI DLRF+LMEE  P PT+NASQ+VK AYD WT  NDKA +Y+LAS+SD+LSKK+E+MVTAR                                GQ 
Subjt:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTAR--------------------------------GQF

Query:  VRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT
        VR+HVL M+V+FNVA+MN A+ DE+SQVS IL+SLSK+FLQFCSN  MNKIEYNMTT
Subjt:  VRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT

TYK15919.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-3758.6Show/hide
Query:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTAR--------------------------------GQF
        MILVI DLRF+LMEE  P PT+NASQ+VK AYD WT  NDKA +Y+LAS+SD+LSKK+E+MVTAR                                GQ 
Subjt:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTAR--------------------------------GQF

Query:  VRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT
        VR+HVL M+V+FNVA+MN A+ DE+SQVS IL+SLSK+FLQFCSN  MNKIEYNMTT
Subjt:  VRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT

TYK21841.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-3759.62Show/hide
Query:  ILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTA--------------------------------RGQFV
        ILVI DLRFILM+E  P PT+NASQ+VK  YDRWT  NDKARVYILASMSD+LSKK+E+MVTA                                 GQ V
Subjt:  ILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTA--------------------------------RGQFV

Query:  RKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT
        R HV+DM+VHFNVA+MNG V DE+SQ+S IL+SL K+FLQF SNA MNKI YNMTT
Subjt:  RKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT

TrEMBL top hitse value%identityAlignment
A0A5A7TJT4 Gag/pol protein9.4e-3657.32Show/hide
Query:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTAR--------------------------------GQF
        MILVIDD  F+LMEE SP PT+NASQ VK AYD WT  NDKAR+YILASMSD+LSKK+E+MVTAR                                GQ 
Subjt:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTAR--------------------------------GQF

Query:  VRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT
        V +HVLD++++FNV +MNG V DE+SQVS IL+SLSK+FLQF SN  +NKI+YNMTT
Subjt:  VRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT

A0A5A7UAF5 Gag/pol protein4.7e-3568Show/hide
Query:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTARGQFVRKHVLDMMVHFNVAKMNGAVIDEQSQVSIIL
        MILVI DLRF+LMEE SP PT+NASQ+V+ AYD WT TNDKARVYILASMSD+LSKK+E+MVTA             +HFNV +MN  V DE+SQVS IL
Subjt:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTARGQFVRKHVLDMMVHFNVAKMNGAVIDEQSQVSIIL

Query:  ESLSKNFLQFCSNAVMNKIEYNMTT
        +SL K+FLQF SNA MNK+EYNMTT
Subjt:  ESLSKNFLQFCSNAVMNKIEYNMTT

A0A5A7VA67 Gag/pol protein1.3e-3758.6Show/hide
Query:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTAR--------------------------------GQF
        MILVI DLRF+LMEE  P PT+NASQ+VK AYD WT  NDKA +Y+LAS+SD+LSKK+E+MVTAR                                GQ 
Subjt:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTAR--------------------------------GQF

Query:  VRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT
        VR+HVL M+V+FNVA+MN A+ DE+SQVS IL+SLSK+FLQFCSN  MNKIEYNMTT
Subjt:  VRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT

A0A5D3D0D9 Gag/pol protein1.3e-3758.6Show/hide
Query:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTAR--------------------------------GQF
        MILVI DLRF+LMEE  P PT+NASQ+VK AYD WT  NDKA +Y+LAS+SD+LSKK+E+MVTAR                                GQ 
Subjt:  MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTAR--------------------------------GQF

Query:  VRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT
        VR+HVL M+V+FNVA+MN A+ DE+SQVS IL+SLSK+FLQFCSN  MNKIEYNMTT
Subjt:  VRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT

A0A5D3DDU7 Gag/pol protein1.3e-3759.62Show/hide
Query:  ILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTA--------------------------------RGQFV
        ILVI DLRFILM+E  P PT+NASQ+VK  YDRWT  NDKARVYILASMSD+LSKK+E+MVTA                                 GQ V
Subjt:  ILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTA--------------------------------RGQFV

Query:  RKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT
        R HV+DM+VHFNVA+MNG V DE+SQ+S IL+SL K+FLQF SNA MNKI YNMTT
Subjt:  RKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQFCSNAVMNKIEYNMTT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTGGTTATCGATGATCTTCGTTTCATCTTAATGGAGGAATATTCTCCTTCCCCTACTCGAAATGCATCCCAGACTGTTAAGCATGCATATGACCGCTGGACAAC
GACCAATGACAAGGCTCGAGTCTACATCTTAGCTAGTATGTCTGACGTATTGAGCAAGAAGAATGAGGTTATGGTCACTGCACGAGGACAATTTGTTAGAAAACATGTTC
TCGACATGATGGTTCATTTCAACGTGGCAAAAATGAATGGAGCAGTCATTGACGAGCAGAGTCAAGTGTCCATTATCTTAGAATCTCTTTCAAAGAACTTTCTTCAATTC
TGCAGCAATGCGGTTATGAACAAGATAGAGTACAATATGACTACCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTCTGGTTATCGATGATCTTCGTTTCATCTTAATGGAGGAATATTCTCCTTCCCCTACTCGAAATGCATCCCAGACTGTTAAGCATGCATATGACCGCTGGACAAC
GACCAATGACAAGGCTCGAGTCTACATCTTAGCTAGTATGTCTGACGTATTGAGCAAGAAGAATGAGGTTATGGTCACTGCACGAGGACAATTTGTTAGAAAACATGTTC
TCGACATGATGGTTCATTTCAACGTGGCAAAAATGAATGGAGCAGTCATTGACGAGCAGAGTCAAGTGTCCATTATCTTAGAATCTCTTTCAAAGAACTTTCTTCAATTC
TGCAGCAATGCGGTTATGAACAAGATAGAGTACAATATGACTACCCCTTAA
Protein sequenceShow/hide protein sequence
MILVIDDLRFILMEEYSPSPTRNASQTVKHAYDRWTTTNDKARVYILASMSDVLSKKNEVMVTARGQFVRKHVLDMMVHFNVAKMNGAVIDEQSQVSIILESLSKNFLQF
CSNAVMNKIEYNMTTP