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PI0021772 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021772
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr03:24289838..24295304
RNA-Seq ExpressionPI0021772
SyntenyPI0021772
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041550.1 retrotransposon protein [Cucumis melo var. makuwa]5.8e-2869.77Show/hide
Query:  AIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFIDMGSNVPGGYEDFPL
        AIAEMRGP+ SGF WNNE KCIIMEK+LFDNWV+SHPAAK LLN+ F +YD+L YVF  D AT+  AE F+DMGSN P GYE F +
Subjt:  AIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFIDMGSNVPGGYEDFPL

KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]9.0e-2959.29Show/hide
Query:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI
        M+A   P   +   TI    +L K  M  A+AEMRGP+ SGF WN+E KCI++EK+LFD+WVKSHP AK LLN+SF+HYD+L YVFGKD AT GRAE F 
Subjt:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI

Query:  DMGSNVPGGYEDF
        D+GSN P GY+ F
Subjt:  DMGSNVPGGYEDF

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]3.4e-2857.14Show/hide
Query:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI
        M+A   P   V   TI    +L K  M  AI EMRGP+ SGF WN+E KCI+ EK++FD+WV+SHPAAK LLN+SF HYD+L YVF KDHAT GRAE F 
Subjt:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI

Query:  DMGSNVPGGYEDFPLTMTS
        D+GSN P GY+ F     S
Subjt:  DMGSNVPGGYEDFPLTMTS

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-2860.36Show/hide
Query:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI
        M+A   P   +   TI    +L K  M  A+AEMRGP+ SGF WN+E KCI++EK+LFD+WVKSHPAAK LLN+SF+HYD+L YVFGKD AT GRAE F 
Subjt:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI

Query:  DMGSNVPGGYE
        D+GSN P GY+
Subjt:  DMGSNVPGGYE

XP_008466949.1 PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo]2.6e-2858.41Show/hide
Query:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI
        M+A   P   +   TI    +L K  M  A+AEMRGP+ SGF WN+E KCI+ EK++FD+WVKSHP AK LLN+SF+HYD+L YVFGKD AT GRAE F 
Subjt:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI

Query:  DMGSNVPGGYEDF
        D+GSN P GY+ F
Subjt:  DMGSNVPGGYEDF

TrEMBL top hitse value%identityAlignment
A0A1S3CTN6 uncharacterized protein LOC1035043321.3e-2858.41Show/hide
Query:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI
        M+A   P   +   TI    +L K  M  A+AEMRGP+ SGF WN+E KCI+ EK++FD+WVKSHP AK LLN+SF+HYD+L YVFGKD AT GRAE F 
Subjt:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI

Query:  DMGSNVPGGYEDF
        D+GSN P GY+ F
Subjt:  DMGSNVPGGYEDF

A0A5A7TZA5 Retrotransposon protein1.7e-2857.14Show/hide
Query:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI
        M+A   P   V   TI    +L K  M  AI EMRGP+ SGF WN+E KCI+ EK++FD+WV+SHPAAK LLN+SF HYD+L YVF KDHAT GRAE F 
Subjt:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI

Query:  DMGSNVPGGYEDFPLTMTS
        D+GSN P GY+ F     S
Subjt:  DMGSNVPGGYEDFPLTMTS

A0A5A7U098 Retrotransposon protein4.4e-2959.29Show/hide
Query:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI
        M+A   P   +   TI    +L K  M  A+AEMRGP+ SGF WN+E KCI++EK+LFD+WVKSHP AK LLN+SF+HYD+L YVFGKD AT GRAE F 
Subjt:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI

Query:  DMGSNVPGGYEDF
        D+GSN P GY+ F
Subjt:  DMGSNVPGGYEDF

A0A5D3C1M0 Retrotransposon protein5.7e-2960.36Show/hide
Query:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI
        M+A   P   +   TI    +L K  M  A+AEMRGP+ SGF WN+E KCI++EK+LFD+WVKSHPAAK LLN+SF+HYD+L YVFGKD AT GRAE F 
Subjt:  MVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFI

Query:  DMGSNVPGGYE
        D+GSN P GY+
Subjt:  DMGSNVPGGYE

A0A5D3D831 Retrotransposon protein2.8e-2869.77Show/hide
Query:  AIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFIDMGSNVPGGYEDFPL
        AIAEMRGP+ SGF WNNE KCIIMEK+LFDNWV+SHPAAK LLN+ F +YD+L YVF  D AT+  AE F+DMGSN P GYE F +
Subjt:  AIAEMRGPSYSGFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFIDMGSNVPGGYEDFPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02210.1 unknown protein7.4e-0526.23Show/hide
Query:  GFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFID
        GF W+NE + +  +  ++ +++K+H  A+  + R   +Y DLC + G     E    + +D
Subjt:  GFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFID

AT4G02210.2 unknown protein7.4e-0526.23Show/hide
Query:  GFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFID
        GF W+NE + +  +  ++ +++K+H  A+  + R   +Y DLC + G     E    + +D
Subjt:  GFDWNNELKCIIMEKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAACAAGACATTAGGTCCCTACTTACCGTGTTCATAACATCCCAATGTCAGTTACTACTGATGTTGGAGTTGTTCATGAACGACAACAAGAGGATAACCCATGT
ACCTTCCGACACTAGGACCATTGCTGGATTAGCGTCGACAAAAATCGTTGATGTCGAGGAGATGGTGGCAATTGTTACGCCTGCACGTCGAGTTGTTGAAGAAACCATAA
CCCGTGACAAACGGTTGCACAAATCCACGATGGAGGTGGCTATAGCAGAAATGCGGGGTCCATCGTATAGTGGGTTCGATTGGAACAATGAACTCAAGTGCATCATTATG
GAGAAGCAATTGTTCGACAATTGGGTGAAGAGTCATCCTGCAGCTAAGGACCTCCTAAACAGATCCTTTCTCCATTACGATGACCTGTGCTACGTATTTGGAAAAGATCA
TGCAACCGAAGGGCGCGCTGAAATATTCATCGATATGGGATCGAATGTGCCCGGAGGGTACGAAGATTTCCCGTTGACGATGACATCGACATGGAGATCCCTTCAATGTA
TAGTCAAGGACTAG
mRNA sequenceShow/hide mRNA sequence
GTTTGGTTTAATCTGTTCCAAAATAAATCCCTCTCATAAACCGTCTGATAACCCCCCTCAACCCCTCTCTCAGCCGACTGTAATATGTCTCCAATCCCTCTTTAATCTGT
TCCAAAATAAATCCGTCGAAAATCATCCTCATCCACTCGTCTTCTTCCTCCTTTCCGTTCCATTTTCGTTTGTTGTTCAAAGCTAAGCAACTTTAACGTTTTTCCCCATT
TTTCCTCTCCGAATCTACATCCATTTTGCTCTTTACGTCTTCCATCCTCGTTGCATTTTCGTCCCCGAAATCTCATCTCCGTCATTGCAAACCATGTCCTTTTCTTCTCC
TAATCTCAGATCCTTCAACCCCTTTTCCTTTCGTTGATGGCTGTGTTTCGATGTTGCCTTCGAAATGGTTCTCCTTTCTCTCTCTATGGTTTCGTTGACCGATTGCGTTC
CACGCGTTGCCTCCGAAACTTTTCGCCTTCCTCTCTCTGTTTCCATGCATGGCATTGCTGTAACACTTGCCACTCTGACTTCCCCTTGTCGCTTCGACTTCCACTTAGTC
GCGCTACACCCAAATACCATAAATTGAATATTGCTACAGCGAAAGAGTTCGGTAGGGGCATCGACGGAGCACAACAGGGGTGACCAGTCTTTTCTATGGTTTATAGAATT
GTTATACGACCAATTTCGATTAAGGCAACGATATGTTATCACAACTTTTGAATTTCTGATGGATGAACAAGACATTAGGTCCCTACTTACCGTGTTCATAACATCCCAAT
GTCAGTTACTACTGATGTTGGAGTTGTTCATGAACGACAACAAGAGGATAACCCATGTACCTTCCGACACTAGGACCATTGCTGGATTAGCGTCGACAAAAATCGTTGAT
GTCGAGGAGATGGTGGCAATTGTTACGCCTGCACGTCGAGTTGTTGAAGAAACCATAACCCGTGACAAACGGTTGCACAAATCCACGATGGAGGTGGCTATAGCAGAAAT
GCGGGGTCCATCGTATAGTGGGTTCGATTGGAACAATGAACTCAAGTGCATCATTATGGAGAAGCAATTGTTCGACAATTGGGTGAAGAGTCATCCTGCAGCTAAGGACC
TCCTAAACAGATCCTTTCTCCATTACGATGACCTGTGCTACGTATTTGGAAAAGATCATGCAACCGAAGGGCGCGCTGAAATATTCATCGATATGGGATCGAATGTGCCC
GGAGGGTACGAAGATTTCCCGTTGACGATGACATCGACATGGAGATCCCTTCAATGTATAGTCAAGGACTAG
Protein sequenceShow/hide protein sequence
MDEQDIRSLLTVFITSQCQLLLMLELFMNDNKRITHVPSDTRTIAGLASTKIVDVEEMVAIVTPARRVVEETITRDKRLHKSTMEVAIAEMRGPSYSGFDWNNELKCIIM
EKQLFDNWVKSHPAAKDLLNRSFLHYDDLCYVFGKDHATEGRAEIFIDMGSNVPGGYEDFPLTMTSTWRSLQCIVKD