; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021804 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021804
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr02:11225813..11226773
RNA-Seq ExpressionPI0021804
SyntenyPI0021804
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]6.3e-1541.57Show/hide
Query:  IKGEDVELAEELELEWEAMSLE-QTKKP--------SPKKTMKKNDVRST--KLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWSRSSTQSTINPI
        I+ EDVELAEEL+ E EAMS E  TK P         P    ++ + RS    LK +        G  +  KG    ++ +V       R    S  N  
Subjt:  IKGEDVELAEELELEWEAMSLE-QTKKP--------SPKKTMKKNDVRST--KLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWSRSSTQSTINPI

Query:  ECYVIVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY
        E Y I+DE+  YF +E+IN LY+ P + ET  H  +T  LKRQA EALETIAW GAE++I PT KY
Subjt:  ECYVIVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY

KAA0049901.1 hypothetical protein E6C27_scaffold13G00540 [Cucumis melo var. makuwa]4.1e-0643.33Show/hide
Query:  NPIECYVIVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAE
        +P + Y  ++ E++YF  E+IN LYD P +IE  GH  +TKP +   +E L+TI W  AE
Subjt:  NPIECYVIVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAE

KAA0050753.1 hypothetical protein E6C27_scaffold46449G00020 [Cucumis melo var. makuwa]1.6e-2951.85Show/hide
Query:  IKGEDVELAEELELEWEAMSLEQTKKPSPKKTMKKNDVRSTKLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWS-------RSSTQSTINPIECYV
        I+GEDVELAEEL+LE EAMSL+  K+ SPKKT KK  ++  K K+S+VDAS  +G +Q G+GG+A K+SI KEVK  S       R    S +N  E YV
Subjt:  IKGEDVELAEELELEWEAMSLEQTKKPSPKKTMKKNDVRSTKLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWS-------RSSTQSTINPIECYV

Query:  IVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY
        I+D + +YF VE+IN LYD P + +T   + +T  LKRQAREAL+TI W G E +I  T  Y
Subjt:  IVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY

KAA0057357.1 hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa]1.2e-2147.92Show/hide
Query:  MSLEQTKKPSPKKTMKKNDVRSTKLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWS-------RSSTQSTINPIECYVIVDEERVYFTVESINHLY
        MSL+  K+ SPKKT KK  ++  K K+S+V+AS L+G +Q  +GG+A K+SI KEVK  S       R    S +N  E YVI+D + +YF VE+IN LY
Subjt:  MSLEQTKKPSPKKTMKKNDVRSTKLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWS-------RSSTQSTINPIECYVIVDEERVYFTVESINHLY

Query:  DSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY
        D P + ET   + +T  LKRQAREAL+TI W G E +I  T  Y
Subjt:  DSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]5.4e-0643.08Show/hide
Query:  NPIECYVIVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIP
        NP + ++ +++E+ YF VE IN LY+SP + E  G   VTK  K  A+EAL+ +AW G   E+ P
Subjt:  NPIECYVIVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIP

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein3.1e-1541.57Show/hide
Query:  IKGEDVELAEELELEWEAMSLE-QTKKP--------SPKKTMKKNDVRST--KLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWSRSSTQSTINPI
        I+ EDVELAEEL+ E EAMS E  TK P         P    ++ + RS    LK +        G  +  KG    ++ +V       R    S  N  
Subjt:  IKGEDVELAEELELEWEAMSLE-QTKKP--------SPKKTMKKNDVRST--KLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWSRSSTQSTINPI

Query:  ECYVIVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY
        E Y I+DE+  YF +E+IN LY+ P + ET  H  +T  LKRQA EALETIAW GAE++I PT KY
Subjt:  ECYVIVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY

A0A5A7U4E3 Uncharacterized protein7.5e-3051.85Show/hide
Query:  IKGEDVELAEELELEWEAMSLEQTKKPSPKKTMKKNDVRSTKLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWS-------RSSTQSTINPIECYV
        I+GEDVELAEEL+LE EAMSL+  K+ SPKKT KK  ++  K K+S+VDAS  +G +Q G+GG+A K+SI KEVK  S       R    S +N  E YV
Subjt:  IKGEDVELAEELELEWEAMSLEQTKKPSPKKTMKKNDVRSTKLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWS-------RSSTQSTINPIECYV

Query:  IVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY
        I+D + +YF VE+IN LYD P + +T   + +T  LKRQAREAL+TI W G E +I  T  Y
Subjt:  IVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY

A0A5A7U8H4 Uncharacterized protein2.0e-0643.33Show/hide
Query:  NPIECYVIVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAE
        +P + Y  ++ E++YF  E+IN LYD P +IE  GH  +TKP +   +E L+TI W  AE
Subjt:  NPIECYVIVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAE

A0A5A7URT6 Uncharacterized protein5.8e-2247.92Show/hide
Query:  MSLEQTKKPSPKKTMKKNDVRSTKLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWS-------RSSTQSTINPIECYVIVDEERVYFTVESINHLY
        MSL+  K+ SPKKT KK  ++  K K+S+V+AS L+G +Q  +GG+A K+SI KEVK  S       R    S +N  E YVI+D + +YF VE+IN LY
Subjt:  MSLEQTKKPSPKKTMKKNDVRSTKLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWS-------RSSTQSTINPIECYVIVDEERVYFTVESINHLY

Query:  DSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY
        D P + ET   + +T  LKRQAREAL+TI W G E +I  T  Y
Subjt:  DSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY

A0A5A7V6M5 Gag/pol protein2.6e-0643.08Show/hide
Query:  NPIECYVIVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIP
        NP + ++ +++E+ YF VE IN LY+SP + E  G   VTK  K  A+EAL+ +AW G   E+ P
Subjt:  NPIECYVIVDEERVYFTVESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGCAAAATTTGTTGAAAGGAGAAAGAAAAGTGGAGGGCAGTGAACGCCAAGGTGCTAGCAATATGAAGTTGGAGATAGATGATGAGGGTGATGCCACCGCAGT
CATCACCTTACTAGCTGAGCAGCGAAAGAAGAGAGAAGAAAAAGAAAGAAATAGAAAAGAGGCGAGGGAGAAGCTGCCAGTGGATAGGGGGTTTGTACGCATCTCTCATA
CAACAGCTGAGAGGGTCTCCAATAAAATGCAAGAGATTGTGGAGACCCAAGAAAATCTTGCGAAGATGTTAGTGGAAAAGGAAGAGAAACGTGAAAAGAGGAGGAAAGAG
CTCACAAAGCTGGGCGAGGTGATTAAAGGAGAAGACGTCGAGTTGGCTGAAGAGCTCGAGCTCGAATGGGAGGCGATGAGCCTTGAGCAAACCAAAAAGCCATCACCGAA
GAAAACCATGAAGAAGAACGACGTTAGGTCCACGAAGTTGAAGAAAAGCAAGGTTGACGCTTCCAGGCTTAAAGGAGGTGAACAAAGGGGCAAGGGAGGTGAGGCCTCAA
AAGTGAGCATCGTCAAGGAAGTGAAGAGATGGTCAAGAAGTTCTACGCAGTCGACTATCAACCCCATCGAGTGTTATGTGATAGTGGACGAGGAACGCGTCTACTTCACC
GTTGAGTCCATCAATCACTTATACGATTCGCCCGTGAACATTGAAACATCAGGGCATTCGTTTGTCACTAAGCCTTTGAAGAGGCAGGCTAGGGAAGCATTGGAAACTAT
CGCGTGGCAAGGGGCGGAGTGGGAAATCATCCCCACAATGAAGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGGCAAAATTTGTTGAAAGGAGAAAGAAAAGTGGAGGGCAGTGAACGCCAAGGTGCTAGCAATATGAAGTTGGAGATAGATGATGAGGGTGATGCCACCGCAGT
CATCACCTTACTAGCTGAGCAGCGAAAGAAGAGAGAAGAAAAAGAAAGAAATAGAAAAGAGGCGAGGGAGAAGCTGCCAGTGGATAGGGGGTTTGTACGCATCTCTCATA
CAACAGCTGAGAGGGTCTCCAATAAAATGCAAGAGATTGTGGAGACCCAAGAAAATCTTGCGAAGATGTTAGTGGAAAAGGAAGAGAAACGTGAAAAGAGGAGGAAAGAG
CTCACAAAGCTGGGCGAGGTGATTAAAGGAGAAGACGTCGAGTTGGCTGAAGAGCTCGAGCTCGAATGGGAGGCGATGAGCCTTGAGCAAACCAAAAAGCCATCACCGAA
GAAAACCATGAAGAAGAACGACGTTAGGTCCACGAAGTTGAAGAAAAGCAAGGTTGACGCTTCCAGGCTTAAAGGAGGTGAACAAAGGGGCAAGGGAGGTGAGGCCTCAA
AAGTGAGCATCGTCAAGGAAGTGAAGAGATGGTCAAGAAGTTCTACGCAGTCGACTATCAACCCCATCGAGTGTTATGTGATAGTGGACGAGGAACGCGTCTACTTCACC
GTTGAGTCCATCAATCACTTATACGATTCGCCCGTGAACATTGAAACATCAGGGCATTCGTTTGTCACTAAGCCTTTGAAGAGGCAGGCTAGGGAAGCATTGGAAACTAT
CGCGTGGCAAGGGGCGGAGTGGGAAATCATCCCCACAATGAAGTATTAA
Protein sequenceShow/hide protein sequence
MEGQNLLKGERKVEGSERQGASNMKLEIDDEGDATAVITLLAEQRKKREEKERNRKEAREKLPVDRGFVRISHTTAERVSNKMQEIVETQENLAKMLVEKEEKREKRRKE
LTKLGEVIKGEDVELAEELELEWEAMSLEQTKKPSPKKTMKKNDVRSTKLKKSKVDASRLKGGEQRGKGGEASKVSIVKEVKRWSRSSTQSTINPIECYVIVDEERVYFT
VESINHLYDSPVNIETSGHSFVTKPLKRQAREALETIAWQGAEWEIIPTMKY