; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021808 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021808
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr04:13736112..13746382
RNA-Seq ExpressionPI0021808
SyntenyPI0021808
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]8.8e-3173.63Show/hide
Query:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        +DNRHHLVSS IPPPSQP+LPKNRGSN+GGK+I L+EAMAP  + EVKEH+++SDSS+SDRHWKRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

KAA0041943.1 hypothetical protein E6C27_scaffold67G003650 [Cucumis melo var. makuwa]3.3e-3070.1Show/hide
Query:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLVCI
        KDN HHLVSSAIPPPSQPKLPKN+GSN+GGK+IHL+EAMA T ++E+ EH+++S+SS+SDRHWKRPLKKAK SGDD  GRGS+A+ + N+P PL+ +
Subjt:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLVCI

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]2.2e-2972.53Show/hide
Query:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        +DNRHHLVSSAIPP SQP+LPKNRGSN+GGK+I L+EAMAP  + EVKE +++SDSS+SDRHWKRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

KAA0055892.1 hypothetical protein E6C27_scaffold438G00100 [Cucumis melo var. makuwa]2.6e-3072.53Show/hide
Query:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        +DNRHHLVSS IPPPSQP+LPKNRGSN+GGK+I L+EAMAP  + EVK+H+++SDSS+SDRHWKRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

KAA0057699.1 hypothetical protein E6C27_scaffold126G00510 [Cucumis melo var. makuwa]1.7e-2971.43Show/hide
Query:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        ++NRHHLVSSAIPPPSQP+LPKNRGSN+GGK+I L+EAMAP  + EV EH+++SDSS+SDRHWKRPLKKAK SGD+  GRG +A+ +P+VP
Subjt:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein4.3e-3173.63Show/hide
Query:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        +DNRHHLVSS IPPPSQP+LPKNRGSN+GGK+I L+EAMAP  + EVKEH+++SDSS+SDRHWKRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

A0A5A7UJ48 PMD domain-containing protein1.2e-3072.53Show/hide
Query:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        +DNRHHLVSS IPPPSQP+LPKNRGSN+GGK+I L+EAMAP  + EVK+H+++SDSS+SDRHWKRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

A0A5A7UVX0 PMD domain-containing protein8.0e-3071.43Show/hide
Query:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        ++NRHHLVSSAIPPPSQP+LPKNRGSN+GGK+I L+EAMAP  + EV EH+++SDSS+SDRHWKRPLKKAK SGD+  GRG +A+ +P+VP
Subjt:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

A0A5D3D2V2 Uncharacterized protein1.6e-3070.1Show/hide
Query:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLVCI
        KDN HHLVSSAIPPPSQPKLPKN+GSN+GGK+IHL+EAMA T ++E+ EH+++S+SS+SDRHWKRPLKKAK SGDD  GRGS+A+ + N+P PL+ +
Subjt:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLVCI

A0A5D3E2X8 Putative mitochondrial protein1.1e-2971.43Show/hide
Query:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        +DNRHHLVSSAIPPPSQP+LPKNRGSN+GGK+I L+E MAP  + EV EH+++SDSS+SDRHWKR LKKAK SGD+  GRG +A+E+P+VP
Subjt:  KDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTACCCACGATAGAGAGGTCAAGGAACACAGAGAGCAGAGCGATAGCAGCAAAAGCGACCGTCATTGGAAGCGACCTCTGAAGAAAGCAAAGGATAATAGACA
CCATTTGGTGAGCAGTGCCATTCCTCCCCCGTCACAACCCAAATTACCAAAGAATCGAGGAAGCAATGTGGGCGGCAAACAGATCCACTTGATTGAGGCAATGGCTCCTA
CCCACGATAGAGAGGTCAAGGAACACAGAGAGCAGAGCGATAGCAGCAGAAGCGACCGTCATTGGAAGCGACCTCTGAAGAAAGCAAAGGCATCGGGCGATGATTCATGT
GGAAGAGGTTCAACTGCGATGGAAATTCCTAACGTTCCAACACCATTGGTTTGCATATTTTCTTCCGTTATATGCATTTTTAAATATTTTATTTTAAAATTCCCTTTTCT
TTGGCTAATTTATTTATTACTTATTTCTACAGTCACCTTTGGACGGTCATCTTCAAGGACTTATAGAGATATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTACCCACGATAGAGAGGTCAAGGAACACAGAGAGCAGAGCGATAGCAGCAAAAGCGACCGTCATTGGAAGCGACCTCTGAAGAAAGCAAAGGATAATAGACA
CCATTTGGTGAGCAGTGCCATTCCTCCCCCGTCACAACCCAAATTACCAAAGAATCGAGGAAGCAATGTGGGCGGCAAACAGATCCACTTGATTGAGGCAATGGCTCCTA
CCCACGATAGAGAGGTCAAGGAACACAGAGAGCAGAGCGATAGCAGCAGAAGCGACCGTCATTGGAAGCGACCTCTGAAGAAAGCAAAGGCATCGGGCGATGATTCATGT
GGAAGAGGTTCAACTGCGATGGAAATTCCTAACGTTCCAACACCATTGGTTTGCATATTTTCTTCCGTTATATGCATTTTTAAATATTTTATTTTAAAATTCCCTTTTCT
TTGGCTAATTTATTTATTACTTATTTCTACAGTCACCTTTGGACGGTCATCTTCAAGGACTTATAGAGATATGTAG
Protein sequenceShow/hide protein sequence
MAPTHDREVKEHREQSDSSKSDRHWKRPLKKAKDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSC
GRGSTAMEIPNVPTPLVCIFSSVICIFKYFILKFPFLWLIYLLLISTVTFGRSSSRTYRDM