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PI0021827 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021827
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionEnzymatic polyprotein
Genome locationchr07:13352148..13353464
RNA-Seq ExpressionPI0021827
SyntenyPI0021827
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]4.4e-5673.05Show/hide
Query:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP
        MSS +G  RGR +STSSKG RPSSS N  PSPMSA QY MDLGFT VTRS++R S I I SPTESSTPPRPS NL+RPSGG+ QMRPPASP S  ESSTP
Subjt:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETR
        PTTYSQAV  +KRF+PRPEIK+YFQK +V+YD IIEPEYQSLT++E VS+IFP+ FNFLPEDL++ +
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETR

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]4.8e-5573.33Show/hide
Query:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP
        MSS +G  RGR +STSSKG+R SSS N APSPMSADQYAMDLGFT VTRS++R SGI I  PTESSTPPRPSANL+RP G + QM+PPASP S  +SSTP
Subjt:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRE
        PTTYSQAV P+KRF+PRP+IK YFQK +V+YD  IE EYQSLT++E VS+IFPE FNFLPEDLR+
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRE

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]7.4e-6476.97Show/hide
Query:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP
        MSS +G  RGR +STSSKG+RP SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPTESSTPPRPS NL+RPS G+ QMRPPASP S  ESSTP
Subjt:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETRKFYEFILVDTK
        PTTYSQAV P+KRF+PRPEIK+YFQK +V+YD IIE EYQSLT +ETVS+IFPE FNFL EDLR+TRKFYEFIL DTK
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETRKFYEFILVDTK

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]7.4e-5676.47Show/hide
Query:  RVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQAVAP
        R +STSS+G+RPSSS N APSPMSADQYAMDLGFTTVTRS+ARSS I+I SPT+SSTPPR SANL+RPS  + QMRP ASPLS  ESSTPPTTYSQ + P
Subjt:  RVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQAVAP

Query:  EKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDL
        +KRF+PR EIK+YFQK V++YDSIIEPEYQSLT++ETVS+IFP+ FNFLP+DL
Subjt:  EKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDL

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]1.2e-6156.73Show/hide
Query:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP
        MSS +G  RGR +STSSKG+ PSSS N APSPMS DQYAMDLG+TTV +S+++SSGI I SP ESSTPPRPS NL+ P G + QMR  ASP S  ESST 
Subjt:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETRKFYEFILVDTKSVEITHHATIKHMKEWFAENGY
        PTTYSQAV P+K+F+PR EIK+YFQK +VIYD IIE EYQ                                                        +NG 
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETRKFYEFILVDTKSVEITHHATIKHMKEWFAENGY

Query:  LQDIDQKKNAEFLSDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQP
        LQDIDQ+KNA+FL+DK K LAAL QAT DADFQRLLSTAVN S+SSK A S IQED+E    EYDL+DPFLDSQP
Subjt:  LQDIDQKKNAEFLSDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein3.6e-6476.97Show/hide
Query:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP
        MSS +G  RGR +STSSKG+RP SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPTESSTPPRPS NL+RPS G+ QMRPPASP S  ESSTP
Subjt:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETRKFYEFILVDTK
        PTTYSQAV P+KRF+PRPEIK+YFQK +V+YD IIE EYQSLT +ETVS+IFPE FNFL EDLR+TRKFYEFIL DTK
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETRKFYEFILVDTK

A0A5D3BI61 Uncharacterized protein5.7e-6256.73Show/hide
Query:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP
        MSS +G  RGR +STSSKG+ PSSS N APSPMS DQYAMDLG+TTV +S+++SSGI I SP ESSTPPRPS NL+ P G + QMR  ASP S  ESST 
Subjt:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETRKFYEFILVDTKSVEITHHATIKHMKEWFAENGY
        PTTYSQAV P+K+F+PR EIK+YFQK +VIYD IIE EYQ                                                        +NG 
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETRKFYEFILVDTKSVEITHHATIKHMKEWFAENGY

Query:  LQDIDQKKNAEFLSDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQP
        LQDIDQ+KNA+FL+DK K LAAL QAT DADFQRLLSTAVN S+SSK A S IQED+E    EYDL+DPFLDSQP
Subjt:  LQDIDQKKNAEFLSDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQP

A0A5D3BM67 Uncharacterized protein9.2e-5277.37Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYD
        MSADQYAMDLGFTTVTRS++RSS IRIES TESSTPPRPSANL+RP GG  QMRPPASP S  ESSTPPTTYSQ V P+KRF+PRPEIK+YFQK +V+YD
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYD

Query:  SIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETRKF
         IIEPEYQS+T+++TVS+IF + FN LPEDLR+TR F
Subjt:  SIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETRKF

A0A5D3E4J4 Uncharacterized protein2.3e-5573.33Show/hide
Query:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP
        MSS +G  RGR +STSSKG+R SSS N APSPMSADQYAMDLGFT VTRS++R SGI I  PTESSTPPRPSANL+RP G + QM+PPASP S  +SSTP
Subjt:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRE
        PTTYSQAV P+KRF+PRP+IK YFQK +V+YD  IE EYQSLT++E VS+IFPE FNFLPEDLR+
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRE

E5GCE6 Uncharacterized protein2.1e-5673.05Show/hide
Query:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP
        MSS +G  RGR +STSSKG RPSSS N  PSPMSA QY MDLGFT VTRS++R S I I SPTESSTPPRPS NL+RPSGG+ QMRPPASP S  ESSTP
Subjt:  MSSMRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETR
        PTTYSQAV  +KRF+PRPEIK+YFQK +V+YD IIEPEYQSLT++E VS+IFP+ FNFLPEDL++ +
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAATGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTACTTTCAAAAGCAAGTGGTAATCTATGATTCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTC
AAGAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAGAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACCATG
CCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAGCGATAAATCAAAACTTTTAGCAGCA
CTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCAGCGTCTTCGTCCATACAGGAAGATGACGAATT
GGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAATGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTACTTTCAAAAGCAAGTGGTAATCTATGATTCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTC
AAGAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAGAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACCATG
CCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAGCGATAAATCAAAACTTTTAGCAGCA
CTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCAGCGTCTTCGTCCATACAGGAAGATGACGAATT
GGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATGTGA
Protein sequenceShow/hide protein sequence
MSSMRGRGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQAVAPEK
RFIPRPEIKTYFQKQVVIYDSIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRETRKFYEFILVDTKSVEITHHATIKHMKEWFAENGYLQDIDQKKNAEFLSDKSKLLAA
LAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQPM