CuGenDBv2

Gene ID	PI0021838
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like
Genome location	chr04:24697045..24709475
RNA-Seq Expression	PI0021838
Synteny	PI0021838
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0046451.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]

2.4e-188

88.01

Show/hide

Query:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC
        MRSKSKQLSSLFRSAI A+KSS+NPQDAALQN VS+IDPLS STSL NAIYKRS+NSP  KKLPQN NSD+QFPALILEESSDSGDS+KHLTEAISS+LC
Subjt:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC

Query:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSVRSPEAQGN VE SLEKL+DIPWFSI+TNHSLTLH +E+S ERKQKWVLKNTQS+RF +LVR+CADRLGSDVTLEVFGKLGRETGVKEY+ALVGIC
Subjt:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKAS DV VVL QIGKVYQ+FK MKEQGF LED TYGPVLACLIDMDMMEEFN FCEA+KDGNPGS+SRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV
        DGVDKFSLQENYLLALCESE T++LLQMLEVIDITKLS TVVA  IFKCLGRLSLHTFAEK LLAFKTSGNGADDI YLI NYAVSIPNLA+
Subjt:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV

KAE8637216.1 hypothetical protein CSA_021119 [Cucumis sativus]

3.1e-172

87.57

Show/hide

Query:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC
        MRSK   LSSL RSAII+SKSSQN QDAALQNYVSTIDPLSPSTSLSNA     INSP SKKLPQN NSD+QFPALILEESSDSGD  KHL +AISS+LC
Subjt:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC

Query:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSV SPEAQGN VE SLEKL+DIPWFSI+TNHSLTLHR+E+SRERK  WVLKNTQS+RF +LVR+CA+RLGSDVTLEVFGKLGRETGVKEYNALVGIC
Subjt:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKASKDV VVLEQIGKVYQLFKLMKEQGF LEDETYGPVLACLIDMDMMEEFN FCEA+KDGNPGS+SRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSG
        DGVDKFSLQENYLLALC SE  +ELLQMLEVIDITKLS TVVA NIFK LGRLSLHTFAEK LLAFKTSG
Subjt:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSG

XP_008454564.1 PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucumis melo]

2.4e-188

88.01

Show/hide

Query:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC
        MRSKSKQLSSLFRSAI A+KSS+NPQDAALQN VS+IDPLS STSL NAIYKRS+NSP  KKLPQN NSD+QFPALILEESSDSGDS+KHLTEAISS+LC
Subjt:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC

Query:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSVRSPEAQGN VE SLEKL+DIPWFSI+TNHSLTLH +E+S ERKQKWVLKNTQS+RF +LVR+CADRLGSDVTLEVFGKLGRETGVKEY+ALVGIC
Subjt:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKAS DV VVL QIGKVYQ+FK MKEQGF LED TYGPVLACLIDMDMMEEFN FCEA+KDGNPGS+SRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV
        DGVDKFSLQENYLLALCESE T++LLQMLEVIDITKLS TVVA  IFKCLGRLSLHTFAEK LLAFKTSGNGADDI YLI NYAVSIPNLA+
Subjt:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV

XP_011651464.1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial [Cucumis sativus]

9.3e-185

87.76

Show/hide

Query:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC
        MRSK   LSSL RSAII+SKSSQN QDAALQNYVSTIDPLSPSTSLSNA     INSP SKKLPQN NSD+QFPALILEESSDSGD  KHL +AISS+LC
Subjt:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC

Query:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSV SPEAQGN VE SLEKL+DIPWFSI+TNHSLTLHR+E+SRERK  WVLKNTQS+RF +LVR+CA+RLGSDVTLEVFGKLGRETGVKEYNALVGIC
Subjt:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKASKDV VVLEQIGKVYQLFKLMKEQGF LEDETYGPVLACLIDMDMMEEFN FCEA+KDGNPGS+SRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV
        DGVDKFSLQENYLLALC SE  +ELLQMLEVIDITKLS TVVA NIFK LGRLSLHTFAEK LLAFKTSGNGADDI YLIYNYAVSIPNLA+
Subjt:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV

XP_022981387.1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucurbita maxima]

4.1e-172

80.1

Show/hide

Query:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC
        M SKSK LSSLFRSAIIASK SQNPQDAAL+NYVS IDP SPSTSLS AI KRSI S NSKKLPQ  NSD+QFPALILEE S SGDSMKHLT+AISSILC
Subjt:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC

Query:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSVRSP+AQ NG E SL++L+DIPWFS  +NHS++L RRE+SRERKQKW+ KN+Q+ RFSQLVRNCA +LG+DVTLEVFGKLGRETGVKEYNAL+ IC
Subjt:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAK SKD+ VVLE I KVYQLFKLMKE GF LEDETYGPVLA LIDMDMMEEFN FCEAVKDGNPGS SRLGYY+MLFY+KIND EK+QELC  AT  
Subjt:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV
        DGVDK+SLQENYLLALCE E  EELLQMLE++DITKL++TV+AANIFKCLGRL LH+ AEK L+A KTSGNGA++IPYLIYN+ VSIPNLA+
Subjt:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L854 Uncharacterized protein

1.5e-172

87.57

Show/hide

Query:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC
        MRSK   LSSL RSAII+SKSSQN QDAALQNYVSTIDPLSPSTSLSNA     INSP SKKLPQN NSD+QFPALILEESSDSGD  KHL +AISS+LC
Subjt:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC

Query:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSV SPEAQGN VE SLEKL+DIPWFSI+TNHSLTLHR+E+SRERK  WVLKNTQS+RF +LVR+CA+RLGSDVTLEVFGKLGRETGVKEYNALVGIC
Subjt:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKASKDV VVLEQIGKVYQLFKLMKEQGF LEDETYGPVLACLIDMDMMEEFN FCEA+KDGNPGS+SRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSG
        DGVDKFSLQENYLLALC SE  +ELLQMLEVIDITKLS TVVA NIFK LGRLSLHTFAEK LLAFKTSG
Subjt:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSG

A0A1S3C047 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1

1.2e-188

88.01

Show/hide

Query:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC
        MRSKSKQLSSLFRSAI A+KSS+NPQDAALQN VS+IDPLS STSL NAIYKRS+NSP  KKLPQN NSD+QFPALILEESSDSGDS+KHLTEAISS+LC
Subjt:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC

Query:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSVRSPEAQGN VE SLEKL+DIPWFSI+TNHSLTLH +E+S ERKQKWVLKNTQS+RF +LVR+CADRLGSDVTLEVFGKLGRETGVKEY+ALVGIC
Subjt:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKAS DV VVL QIGKVYQ+FK MKEQGF LED TYGPVLACLIDMDMMEEFN FCEA+KDGNPGS+SRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV
        DGVDKFSLQENYLLALCESE T++LLQMLEVIDITKLS TVVA  IFKCLGRLSLHTFAEK LLAFKTSGNGADDI YLI NYAVSIPNLA+
Subjt:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV

A0A5D3BES4 Pentatricopeptide repeat-containing protein

1.2e-188

88.01

Show/hide

Query:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC
        MRSKSKQLSSLFRSAI A+KSS+NPQDAALQN VS+IDPLS STSL NAIYKRS+NSP  KKLPQN NSD+QFPALILEESSDSGDS+KHLTEAISS+LC
Subjt:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC

Query:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSVRSPEAQGN VE SLEKL+DIPWFSI+TNHSLTLH +E+S ERKQKWVLKNTQS+RF +LVR+CADRLGSDVTLEVFGKLGRETGVKEY+ALVGIC
Subjt:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKAS DV VVL QIGKVYQ+FK MKEQGF LED TYGPVLACLIDMDMMEEFN FCEA+KDGNPGS+SRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV
        DGVDKFSLQENYLLALCESE T++LLQMLEVIDITKLS TVVA  IFKCLGRLSLHTFAEK LLAFKTSGNGADDI YLI NYAVSIPNLA+
Subjt:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV

A0A6J1FIW6 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1

1.3e-171

79.34

Show/hide

Query:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC
        M SKSK LSSLFRSAIIASK SQNPQDAAL+NYVS IDP SPSTSLS A  KRSI S NSKKLPQ  NSD+QFPALILEE S SGDSMKHLT+AISSILC
Subjt:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC

Query:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSVRSP+AQ NG E SL++L+DIPWFS  +NHS++L RRE+SRERKQKW+ KN+Q+ RF+QLVRNCA +LG+DVTLEVFGKLGRETGVKEYNAL+ IC
Subjt:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAK SKD+ VVLEQI KVYQLFKLMKE GF LEDETYGPVL  LIDMDMMEEFN FCEAVKDGNPGS SRLGYY+MLFY+KIND EK+QELC  A   
Subjt:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV
        DGVDK+SLQENYLLALCE E  EELLQMLE++DITKLS+TV+AAN+FKCLGRL LH+ AEK L+A KTSGNGA++IPYLIYN+ VSIPNLA+
Subjt:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV

A0A6J1ITU1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1

2.0e-172

80.1

Show/hide

Query:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC
        M SKSK LSSLFRSAIIASK SQNPQDAAL+NYVS IDP SPSTSLS AI KRSI S NSKKLPQ  NSD+QFPALILEE S SGDSMKHLT+AISSILC
Subjt:  MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILC

Query:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSVRSP+AQ NG E SL++L+DIPWFS  +NHS++L RRE+SRERKQKW+ KN+Q+ RFSQLVRNCA +LG+DVTLEVFGKLGRETGVKEYNAL+ IC
Subjt:  EGSSVRSPEAQGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAK SKD+ VVLE I KVYQLFKLMKE GF LEDETYGPVLA LIDMDMMEEFN FCEAVKDGNPGS SRLGYY+MLFY+KIND EK+QELC  AT  
Subjt:  LEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV
        DGVDK+SLQENYLLALCE E  EELLQMLE++DITKL++TV+AANIFKCLGRL LH+ AEK L+A KTSGNGA++IPYLIYN+ VSIPNLA+
Subjt:  DGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV

SwissProt top hits

e value

%identity

Alignment

O49711 Pentatricopeptide repeat-containing protein At4g21880, mitochondrial

8.8e-45

37.55

Show/hide

Query:  RELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYG
        ++ SR R      +N QS    +L + C  +LG++   EV  K+G+E G KEYNA+  +C+++A+ S D    L+QIGK  +  K M++ GF + +  YG
Subjt:  RELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYG

Query:  PVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSAT
        P    L+DM+M+ EF +  + +K+  P S  RL YY+ML +I++NDEEK+ +LC +   D G+    LQE YL+ALCE +  E   ++LE++DIT +S+ 
Subjt:  PVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSAT

Query:  VVAANIFKCLGRLSLHTFAEKFLLAFK-TSGNGADDIPYLIYNYAVSIPNLAV
            +IF  LG+  L + A K L   +    +G + +  LI++YA  IPN  V
Subjt:  VVAANIFKCLGRLSLHTFAEKFLLAFK-TSGNGADDIPYLIYNYAVSIPNLAV

Q6NQ81 Pentatricopeptide repeat-containing protein At4g04790, mitochondrial

3.5e-57

37.08

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Query:  SLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEA-----ISSILCEGSSVRSPEAQGNGVETSLEK--LIDIPWFSIQTNHSLT
        SL ++++K  I  P  +    + N DI   +  +++   S +S   L EA     +S +L   +S +S          SLEK   + IP F+ +  + ++
Subjt:  SLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEA-----ISSILCEGSSVRSPEAQGNGVETSLEK--LIDIPWFSIQTNHSLT

Query:  LHRRELSRERKQKWVLK-NTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLED
        L  +ELSRERK++ V K N  S RF+++ R+ A +LG++     F ++ +E  V EYNA++G+ LE A+ S D+   L  I K ++L K M+++GF +E+
Subjt:  LHRRELSRERKQKWVLK-NTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLED

Query:  ETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEHTEELLQMLEVIDITK
          YGP+L  LI MDM++EF+ F + +++ +PGS+ RLGYY+ML +I + D EK++ELC     D+G     LQENYLLALC+ +    L ++LE++DITK
Subjt:  ETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEHTEELLQMLEVIDITK

Query:  LSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV
        + ++ + ANIF+ LGR SL + A +FL   + S  G  ++  LI  Y+   PN  V
Subjt:  LSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV

Arabidopsis top hits

e value

%identity

Alignment

AT4G04790.1 Tetratricopeptide repeat (TPR)-like superfamily protein

2.5e-58

37.08

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Query:  SLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEA-----ISSILCEGSSVRSPEAQGNGVETSLEK--LIDIPWFSIQTNHSLT
        SL ++++K  I  P  +    + N DI   +  +++   S +S   L EA     +S +L   +S +S          SLEK   + IP F+ +  + ++
Subjt:  SLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEA-----ISSILCEGSSVRSPEAQGNGVETSLEK--LIDIPWFSIQTNHSLT

Query:  LHRRELSRERKQKWVLK-NTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLED
        L  +ELSRERK++ V K N  S RF+++ R+ A +LG++     F ++ +E  V EYNA++G+ LE A+ S D+   L  I K ++L K M+++GF +E+
Subjt:  LHRRELSRERKQKWVLK-NTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLED

Query:  ETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEHTEELLQMLEVIDITK
          YGP+L  LI MDM++EF+ F + +++ +PGS+ RLGYY+ML +I + D EK++ELC     D+G     LQENYLLALC+ +    L ++LE++DITK
Subjt:  ETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEHTEELLQMLEVIDITK

Query:  LSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV
        + ++ + ANIF+ LGR SL + A +FL   + S  G  ++  LI  Y+   PN  V
Subjt:  LSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAV

AT4G21880.1 Pentatricopeptide repeat (PPR) superfamily protein

6.3e-46

37.55

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Query:  RELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYG
        ++ SR R      +N QS    +L + C  +LG++   EV  K+G+E G KEYNA+  +C+++A+ S D    L+QIGK  +  K M++ GF + +  YG
Subjt:  RELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVAVVLEQIGKVYQLFKLMKEQGFPLEDETYG

Query:  PVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSAT
        P    L+DM+M+ EF +  + +K+  P S  RL YY+ML +I++NDEEK+ +LC +   D G+    LQE YL+ALCE +  E   ++LE++DIT +S+ 
Subjt:  PVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEHTEELLQMLEVIDITKLSAT

Query:  VVAANIFKCLGRLSLHTFAEKFLLAFK-TSGNGADDIPYLIYNYAVSIPNLAV
            +IF  LG+  L + A K L   +    +G + +  LI++YA  IPN  V
Subjt:  VVAANIFKCLGRLSLHTFAEKFLLAFK-TSGNGADDIPYLIYNYAVSIPNLAV

Sequences

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CDS sequence

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ATGCGTTCCAAATCCAAACAACTAAGCTCACTATTCCGCTCCGCCATTATAGCTTCAAAATCTTCACAGAATCCCCAAGATGCAGCTCTTCAAAACTACGTTTCCACTAT
CGATCCTTTATCTCCCAGCACCTCTCTCTCTAACGCCATCTATAAGCGTTCCATCAACTCTCCGAACTCCAAGAAGCTTCCCCAGAACTCCAATTCTGACATTCAATTTC
CTGCTCTCATTCTAGAAGAGTCTTCGGATTCTGGGGATTCTATGAAGCATCTAACCGAGGCCATATCTTCCATTCTGTGCGAAGGCTCATCTGTTAGGTCTCCTGAAGCA
CAAGGAAATGGTGTTGAAACATCTTTGGAAAAATTAATAGATATACCATGGTTTTCCATTCAAACAAATCATAGCTTAACATTACATCGCAGAGAATTATCCCGGGAAAG
AAAGCAAAAATGGGTGTTAAAAAATACCCAAAGCAATAGATTTAGCCAATTAGTTAGAAATTGCGCAGACAGGTTGGGGAGTGATGTTACTCTAGAAGTTTTTGGTAAAT
TGGGACGAGAGACTGGTGTGAAAGAATACAATGCACTAGTAGGTATATGTTTAGAAAAGGCTAAGGCAAGTAAGGACGTGGCGGTTGTATTGGAACAGATTGGGAAGGTT
TATCAGCTATTTAAATTAATGAAAGAACAGGGTTTTCCATTAGAAGATGAAACTTATGGCCCAGTGCTTGCATGTTTAATTGACATGGACATGATGGAAGAATTTAATTT
ATTCTGCGAGGCTGTAAAAGATGGAAATCCAGGCTCAATGTCAAGGTTGGGTTACTATAAGATGTTGTTCTATATTAAAATCAATGATGAAGAAAAAGTTCAGGAGCTTT
GTTACCGTGCTACAGTTGATGATGGAGTGGACAAGTTCAGTTTACAAGAAAATTATTTGTTGGCGCTCTGTGAAAGTGAGCATACGGAGGAACTTTTGCAGATGCTGGAA
GTTATAGACATCACAAAACTTTCAGCAACTGTAGTTGCAGCTAACATCTTCAAATGCTTAGGGAGGCTATCACTTCACACTTTTGCAGAGAAGTTTCTTTTGGCGTTTAA
AACTTCTGGGAATGGAGCAGATGATATCCCATATCTTATATATAATTATGCTGTCAGCATTCCAAATTTAGCGGTGAGATTCCCATGA

mRNA sequence

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Protein sequence

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MRSKSKQLSSLFRSAIIASKSSQNPQDAALQNYVSTIDPLSPSTSLSNAIYKRSINSPNSKKLPQNSNSDIQFPALILEESSDSGDSMKHLTEAISSILCEGSSVRSPEA
QGNGVETSLEKLIDIPWFSIQTNHSLTLHRRELSRERKQKWVLKNTQSNRFSQLVRNCADRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVAVVLEQIGKV
YQLFKLMKEQGFPLEDETYGPVLACLIDMDMMEEFNLFCEAVKDGNPGSMSRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEHTEELLQMLE
VIDITKLSATVVAANIFKCLGRLSLHTFAEKFLLAFKTSGNGADDIPYLIYNYAVSIPNLAVRFP

PI0021838 (gene) of Melon (PI 482460) v1 genome