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PI0021840 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021840
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionR3H domain-containing protein 2-like
Genome locationchr04:3967221..3969149
RNA-Seq ExpressionPI0021840
SyntenyPI0021840
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034658.1 R3H domain-containing protein 2-like [Cucumis melo var. makuwa]5.3e-0873.33Show/hide
Query:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVR
        MLPSSSPKKNSKSL   V DAAPAYH+SSASF S SASASSALDRVSE  +I  +  F+R
Subjt:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVR

KAG7032009.1 R3H domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-0570.83Show/hide
Query:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSE
        MLPSSSP KNSKSL +S+ DAAPA H+SSASF S  +SASS +DRV E
Subjt:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSE

XP_008446764.1 PREDICTED: R3H domain-containing protein 2-like [Cucumis melo]5.3e-0873.33Show/hide
Query:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVR
        MLPSSSPKKNSKSL   V DAAPAYH+SSASF S SASASSALDRVSE  +I  +  F+R
Subjt:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVR

XP_031742171.1 R3H domain-containing protein 2 [Cucumis sativus]3.8e-0656.76Show/hide
Query:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVRLCTILRNVYRIHML
        MLPSSSPKKNSKSL   V DAA AYH+S+ASF S S SASSALDRVSE    ++  +        R+VY++  L
Subjt:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVRLCTILRNVYRIHML

XP_038892280.1 uncharacterized protein LOC120081466 [Benincasa hispida]2.1e-0973.33Show/hide
Query:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVR
        MLPSSSPKKNSKSL HSV DAAPAYH+SSASF S SAS SS LDRVSE  +I  +  F+R
Subjt:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVR

TrEMBL top hitse value%identityAlignment
A0A1S3BGI0 R3H domain-containing protein 2-like2.6e-0873.33Show/hide
Query:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVR
        MLPSSSPKKNSKSL   V DAAPAYH+SSASF S SASASSALDRVSE  +I  +  F+R
Subjt:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVR

A0A5A7UEN7 Uncharacterized protein3.5e-0557.14Show/hide
Query:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFV-RLCTILRNVY
        MLPSS PKKNSKSL +++ DAAP+YH+SSAS       +         MLSIRLIS FV RLCT L +VY
Subjt:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFV-RLCTILRNVY

A0A5D3CFX4 R3H domain-containing protein 2-like2.6e-0873.33Show/hide
Query:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVR
        MLPSSSPKKNSKSL   V DAAPAYH+SSASF S SASASSALDRVSE  +I  +  F+R
Subjt:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVR

A0A6J1GZL4 R3H domain-containing protein 2-like2.6e-0570.83Show/hide
Query:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSE
        MLPSSSP KNSKSL +S  DAAPA H+SSASF S  +SASS +DRV E
Subjt:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSE

A0A6J1HWM6 R3H domain-containing protein 1-like5.0e-0463.33Show/hide
Query:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVR
        MLPSSSP KNSKSL HSV DAA   H SSASF S SAS SS  DR SE + I  +  F+R
Subjt:  MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCCTTCTTCATCTCCTAAGAAGAATTCCAAATCCTTGTACCATTCCGTTGTCGATGCTGCTCCTGCCTATCACTATTCATCCGCTTCGTTTTCTTCCTTTTCTGC
TTCGGCTTCTTCTGCTCTCGATAGGGTTTCCGAGATGCTATCAATCAGGTTGATCAGTTACTTCGTGAGGCTTTGCACAATCCTCAGGAACGTCTATCGAATCCACATGT
TGCCTTGGTGCCATCTTTGCAAAGGCGGAAACAAACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCCTTCTTCATCTCCTAAGAAGAATTCCAAATCCTTGTACCATTCCGTTGTCGATGCTGCTCCTGCCTATCACTATTCATCCGCTTCGTTTTCTTCCTTTTCTGC
TTCGGCTTCTTCTGCTCTCGATAGGGTTTCCGAGATGCTATCAATCAGGTTGATCAGTTACTTCGTGAGGCTTTGCACAATCCTCAGGAACGTCTATCGAATCCACATGT
TGCCTTGGTGCCATCTTTGCAAAGGCGGAAACAAACATTAA
Protein sequenceShow/hide protein sequence
MLPSSSPKKNSKSLYHSVVDAAPAYHYSSASFSSFSASASSALDRVSEMLSIRLISYFVRLCTILRNVYRIHMLPWCHLCKGGNKH