; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021842 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021842
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr08:4919566..4920399
RNA-Seq ExpressionPI0021842
SyntenyPI0021842
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060431.1 hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa]7.5e-7379.19Show/hide
Query:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ
        KKTALCMWEDI+DKIMRT FEYIPRLR EIATVLSGI KI  + LTPLEEYLNSYLKRVD+FNDVQS YSAQLL  DK RQLDEKTSAI+E L LM++L+
Subjt:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ

Query:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL
        EDA VIQERAMQLSLEKKELE RLQS+N +SEQLSILSC+K EAI ++ELE+A+LQDE N LE T AITEE  EALA VR+SM+AAREEF+NFKWKL
Subjt:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL

KAA0061097.1 hypothetical protein E6C27_scaffold348G00060 [Cucumis melo var. makuwa]4.9e-7278.17Show/hide
Query:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ
        +KTALCMWEDI+DKIMRTSFEYIPRLR EIATVLSGI KI AD LT LEEYLNSYLKRVD+FNDVQS YSAQLL  DK RQL+EKTSAIKE L L+ QL+
Subjt:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ

Query:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL
         DAKVIQER  +LSLE+KELE RLQSIN +SEQLSILSC+K EAID++ELE+ +LQDE N LESTSAI EEA EALAT+R+SM+A REEF+NFKW+L
Subjt:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]1.3e-7279.19Show/hide
Query:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ
        +KTALCMWEDI+DKIMRT FEYIPRLR EIATVLSGI KI AD LT LEEYLNSYLKRVD+FNDVQS YSAQLL  DK RQL+EKTSAIKEVL L+ QL+
Subjt:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ

Query:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL
         DAKVIQER  +LSLE+KELE RL+SIN +SEQLSILSC+K EAID++ELE+A+LQDE N LEST AITEEA EALATVR+SM+AAREEF+NFKW+L
Subjt:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]3.2e-7177.66Show/hide
Query:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ
        +KTALCMWEDI+DKIMRT FEYIPRLR EIATVLSGI KI AD LT LEEYLNSYLKRVD+FNDVQS +S QLL MDK RQL+EKTSAIKE L L+ QL+
Subjt:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ

Query:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL
         DAKVIQER  +LSLE+KELE RL+SIN +SEQLSILSC+K EAID++ELE+A+L+DE N LEST AITEEA EALATVR+SM+AAREEF+NFKW+L
Subjt:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]6.3e-7278.17Show/hide
Query:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ
        +KTALCMWEDI+DKIMRTSFEYIPRLR EIATVLSGI KI AD LT LEEYLNSYLKRVD+FNDVQS YSAQLL  DK RQL+EKTSAIKE L L+ QL+
Subjt:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ

Query:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL
         DAKVIQER  +LSLE+KELE RLQSIN +SEQLSILSC+K EAID++ELE+A+LQDE N LEST AI EEA EALAT+R+SM+A REEF+NFKW+L
Subjt:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL

TrEMBL top hitse value%identityAlignment
A0A5A7V2J6 Uncharacterized protein2.4e-7278.17Show/hide
Query:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ
        +KTALCMWEDI+DKIMRTSFEYIPRLR EIATVLSGI KI AD LT LEEYLNSYLKRVD+FNDVQS YSAQLL  DK RQL+EKTSAIKE L L+ QL+
Subjt:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ

Query:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL
         DAKVIQER  +LSLE+KELE RLQSIN +SEQLSILSC+K EAID++ELE+ +LQDE N LESTSAI EEA EALAT+R+SM+A REEF+NFKW+L
Subjt:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL

A0A5A7V3X5 PMD domain-containing protein3.6e-7379.19Show/hide
Query:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ
        KKTALCMWEDI+DKIMRT FEYIPRLR EIATVLSGI KI  + LTPLEEYLNSYLKRVD+FNDVQS YSAQLL  DK RQLDEKTSAI+E L LM++L+
Subjt:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ

Query:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL
        EDA VIQERAMQLSLEKKELE RLQS+N +SEQLSILSC+K EAI ++ELE+A+LQDE N LE T AITEE  EALA VR+SM+AAREEF+NFKWKL
Subjt:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL

A0A5A7V4F4 PMD domain-containing protein1.5e-7177.66Show/hide
Query:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ
        +KTALCMWEDI+DKIMRT FEYIPRLR EIATVLSGI KI AD LT LEEYLNSYLKRVD+FNDVQS +S QLL MDK RQL+EKTSAIKE L L+ QL+
Subjt:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ

Query:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL
         DAKVIQER  +LSLE+KELE RL+SIN +SEQLSILSC+K EAID++ELE+A+L+DE N LEST AITEEA EALATVR+SM+AAREEF+NFKW+L
Subjt:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL

A0A5A7VHW8 PMD domain-containing protein6.2e-7379.19Show/hide
Query:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ
        +KTALCMWEDI+DKIMRT FEYIPRLR EIATVLSGI KI AD LT LEEYLNSYLKRVD+FNDVQS YSAQLL  DK RQL+EKTSAIKEVL L+ QL+
Subjt:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ

Query:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL
         DAKVIQER  +LSLE+KELE RL+SIN +SEQLSILSC+K EAID++ELE+A+LQDE N LEST AITEEA EALATVR+SM+AAREEF+NFKW+L
Subjt:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL

A0A5D3BW91 Uncharacterized protein3.1e-7278.17Show/hide
Query:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ
        +KTALCMWEDI+DKIMRTSFEYIPRLR EIATVLSGI KI AD LT LEEYLNSYLKRVD+FNDVQS YSAQLL  DK RQL+EKTSAIKE L L+ QL+
Subjt:  KKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQLLLMDKTRQLDEKTSAIKEVLALMDQLQ

Query:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL
         DAKVIQER  +LSLE+KELE RLQSIN +SEQLSILSC+K EAID++ELE+A+LQDE N LEST AI EEA EALAT+R+SM+A REEF+NFKW+L
Subjt:  EDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKSMKAAREEFRNFKWKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTCTGTTCTTCAACTATACTCACCACTACATCTACATCATTCTAGTGAATGAAAAAGATGTTGAAAAATCAAATCCTTTGTCCAAAGAACCCAAAGCGCCTTT
AGAGAAGAAAACGGCCTTATGCATGTGGGAGGACATTCGAGACAAGATCATGCGCACTTCTTTTGAATATATCCCAAGGCTTAGGCTGGAAATAGCAACGGTTCTTTCAG
GAATTGCAAAGATCCAAGCAGACAACTTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTAAAAGGGTAGACAGCTTCAATGATGTACAATCTTTATATTCCGCACAA
CTGCTGTTGATGGATAAAACTCGTCAATTGGACGAGAAGACATCTGCCATCAAAGAAGTCTTGGCTTTGATGGACCAACTACAGGAAGATGCCAAAGTTATTCAGGAGAG
GGCTATGCAGTTGTCCTTGGAAAAGAAAGAACTGGAGAGCAGACTTCAGAGTATAAATACTAAGTCTGAACAGCTATCCATCTTATCTTGTAAGAAAAATGAGGCCATAG
ATAAGAAGGAATTGGAGATTGCTCAGCTTCAAGATGAAGCCAATGCTCTTGAAAGCACCTCTGCTATTACCGAAGAAGCCACTGAGGCCTTGGCTACGGTTCGTAAGAGT
ATGAAGGCTGCACGCGAAGAATTCAGGAACTTTAAGTGGAAGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACTCTGTTCTTCAACTATACTCACCACTACATCTACATCATTCTAGTGAATGAAAAAGATGTTGAAAAATCAAATCCTTTGTCCAAAGAACCCAAAGCGCCTTT
AGAGAAGAAAACGGCCTTATGCATGTGGGAGGACATTCGAGACAAGATCATGCGCACTTCTTTTGAATATATCCCAAGGCTTAGGCTGGAAATAGCAACGGTTCTTTCAG
GAATTGCAAAGATCCAAGCAGACAACTTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTAAAAGGGTAGACAGCTTCAATGATGTACAATCTTTATATTCCGCACAA
CTGCTGTTGATGGATAAAACTCGTCAATTGGACGAGAAGACATCTGCCATCAAAGAAGTCTTGGCTTTGATGGACCAACTACAGGAAGATGCCAAAGTTATTCAGGAGAG
GGCTATGCAGTTGTCCTTGGAAAAGAAAGAACTGGAGAGCAGACTTCAGAGTATAAATACTAAGTCTGAACAGCTATCCATCTTATCTTGTAAGAAAAATGAGGCCATAG
ATAAGAAGGAATTGGAGATTGCTCAGCTTCAAGATGAAGCCAATGCTCTTGAAAGCACCTCTGCTATTACCGAAGAAGCCACTGAGGCCTTGGCTACGGTTCGTAAGAGT
ATGAAGGCTGCACGCGAAGAATTCAGGAACTTTAAGTGGAAGCTTTGA
Protein sequenceShow/hide protein sequence
MTTLFFNYTHHYIYIILVNEKDVEKSNPLSKEPKAPLEKKTALCMWEDIRDKIMRTSFEYIPRLRLEIATVLSGIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSLYSAQ
LLLMDKTRQLDEKTSAIKEVLALMDQLQEDAKVIQERAMQLSLEKKELESRLQSINTKSEQLSILSCKKNEAIDKKELEIAQLQDEANALESTSAITEEATEALATVRKS
MKAAREEFRNFKWKL