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PI0021853 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021853
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:12459428..12459592
RNA-Seq ExpressionPI0021853
SyntenyPI0021853
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047357.1 uncharacterized protein E6C27_scaffold754G00030 [Cucumis melo var. makuwa]1.7e-1283.33Show/hide
Query:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM
        MMK +R+DRQERR QQQREE+ LQEDEEVIDLVEQERQVGG+ NMRG+GRNNLM
Subjt:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM

TYK21797.1 uncharacterized protein E5676_scaffold991G00010 [Cucumis melo var. makuwa]2.1e-0764.81Show/hide
Query:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM
        M++++RE+RQERR QQQRE +  QEDE + DL   ERQ+GG+GNMRGRGRNNL+
Subjt:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM

XP_016902063.1 PREDICTED: uncharacterized protein LOC107991521 [Cucumis melo]1.7e-1283.33Show/hide
Query:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM
        MMK +R+DRQERR QQQREE+ LQEDEEVIDLVEQERQVGG+ NMRG+GRNNLM
Subjt:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM

XP_022158838.1 uncharacterized protein LOC111025303 [Momordica charantia]3.7e-0773.08Show/hide
Query:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNN
        MM+++ EDRQERR QQQREE+ALQED +  DL EQERQVGG+ N RGRGRNN
Subjt:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNN

XP_038902315.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120088948 [Benincasa hispida]5.6e-0873.58Show/hide
Query:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNL
        MM+++REDRQERR QQQR     QEDE VIDLVEQERQ+ GKGNMRG+GRNN+
Subjt:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNL

TrEMBL top hitse value%identityAlignment
A0A1S4E1G3 uncharacterized protein LOC1079915218.2e-1383.33Show/hide
Query:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM
        MMK +R+DRQERR QQQREE+ LQEDEEVIDLVEQERQVGG+ NMRG+GRNNLM
Subjt:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM

A0A5A7TZH9 Retrotrans_gag domain-containing protein8.2e-1383.33Show/hide
Query:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM
        MMK +R+DRQERR QQQREE+ LQEDEEVIDLVEQERQVGG+ NMRG+GRNNLM
Subjt:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM

A0A5A7UR86 Putative polyprotein1.8e-0766.04Show/hide
Query:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNL
        M++++RE+RQERR QQQRE Q  QEDE + DL   ERQ+GG+GN+RGRGRNNL
Subjt:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNL

A0A5D3BUV3 Uncharacterized protein1.8e-0768.52Show/hide
Query:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM
        +++++ ED+QERR Q Q EE+ALQEDE+V+DLVEQERQVG  GN+RGRGRNN M
Subjt:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM

A0A5D3DDM5 Uncharacterized protein1.0e-0764.81Show/hide
Query:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM
        M++++RE+RQERR QQQRE +  QEDE + DL   ERQ+GG+GNMRGRGRNNL+
Subjt:  MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAAATTGTGAGGGAAGATAGGCAAGAAAGGAGGACACAACAACAAAGAGAAGAACAAGCCTTGCAAGAAGATGAGGAAGTGATTGATTTAGTTGAACAAGAAAG
ACAAGTTGGAGGAAAAGGAAACATGAGAGGAAGAGGAAGAAATAATCTTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAAATTGTGAGGGAAGATAGGCAAGAAAGGAGGACACAACAACAAAGAGAAGAACAAGCCTTGCAAGAAGATGAGGAAGTGATTGATTTAGTTGAACAAGAAAG
ACAAGTTGGAGGAAAAGGAAACATGAGAGGAAGAGGAAGAAATAATCTTATGTAA
Protein sequenceShow/hide protein sequence
MMKIVREDRQERRTQQQREEQALQEDEEVIDLVEQERQVGGKGNMRGRGRNNLM