; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021856 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021856
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionExosome complex component RRP4-like protein
Genome locationchr02:25097467..25101956
RNA-Seq ExpressionPI0021856
SyntenyPI0021856
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0000178 - exosome (RNase complex) (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036093 - NAC domain superfamily
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057748.1 exosome complex component RRP4-like protein [Cucumis melo var. makuwa]3.6e-12075.39Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV
        MRGLQIFLNHTQQTRLKNAQKTLESLSSKAN DASVAV DT+P +YEDGVLKGHGTLDLNGEVV TICGVVERVNKLIYVR+LRAR YKPE+GDIVVGRV
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV

Query:  TEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        TEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
Subjt:  TEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGE----------------------KFWQPSARKSTYSIRDTAEYMQN-CKCYSSI------------------VYLSISLNID
        EQYGIDLILGCNGFIWIG+                      KF      +    +    E  QN C+  ++I                  V LSISLNI+
Subjt:  EQYGIDLILGCNGFIWIGE----------------------KFWQPSARKSTYSIRDTAEYMQN-CKCYSSI------------------VYLSISLNID

Query:  VHEMLGSEFFVLTAEKE
        VHEMLG EFFVL AEKE
Subjt:  VHEMLGSEFFVLTAEKE

TYJ98430.1 exosome complex component RRP4-like protein [Cucumis melo var. makuwa]1.1e-22282.58Show/hide
Query:  QQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDI
        +QTRLKNAQKTLESLSSKAN DASVAV DT+P +YEDGVLKGHGTLDLNGEVV TICGVVERVNKLIYVR+LRARYKPE+GDIVVGRVTEVAPKRWRLDI
Subjt:  QQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDI

Query:  HYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
        HYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
Subjt:  HYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWIGEKFWQPSARKSTYSIRDTAEYMQNCKCYSSIVYLSISLNIDVHEMLGSEFFVLTAEKEEIGMMRGLPPGFRFEPTEEELVFEYLKCKVFSSALP
        GFIWIG         K   S +DT    Q  K          +    +HE + +              +R L         EEELVFEYLKCKVFSSALP
Subjt:  GFIWIGEKFWQPSARKSTYSIRDTAEYMQNCKCYSSIVYLSISLNIDVHEMLGSEFFVLTAEKEEIGMMRGLPPGFRFEPTEEELVFEYLKCKVFSSALP

Query:  ASIIPEINGVWNLDPWDIPAAGGGDEEKYLFS-KEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKNTLDFYTNNIRKMKKTGWV
        ASIIPEINGVWNLDPWDIPAAGGGDEEKYLFS KEAEEYNNNNNGE GGIIGWSKSGYWKARGREKEIVSSENGVALMGMK+TLDFYTNNIRKMKKTGWV
Subjt:  ASIIPEINGVWNLDPWDIPAAGGGDEEKYLFS-KEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKNTLDFYTNNIRKMKKTGWV

Query:  MHQYRLIIPHSHSSTNKWVLCHILSPTNKLFNHIIHRHRHRRRLHYSISSTKDEN---EDEDDEHANHITTSTAFSDEEHDSVSSTASSSSTSATFTDFT
        MHQYRLIIPHSHSSTNKWVLCHILSPTNKLF+HIIH HRHRRRL YSISSTKDEN   +DE DEH NHITTSTAFSD+EHDSVSSTASSSSTSATFTDFT
Subjt:  MHQYRLIIPHSHSSTNKWVLCHILSPTNKLFNHIIHRHRHRRRLHYSISSTKDEN---EDEDDEHANHITTSTAFSDEEHDSVSSTASSSSTSATFTDFT

Query:  STTTTTTTTFH
        S TTT TTTFH
Subjt:  STTTTTTTTFH

XP_004138030.1 NAC domain-containing protein 83 isoform X2 [Cucumis sativus]1.4e-11993.03Show/hide
Query:  MMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEI
        MMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVW+LDPWDIPAAGGGDEEKYLFSKEAEE+NNNNNGEGGGIIGWSKSGYWKARGREKEI
Subjt:  MMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEI

Query:  VSSENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFNHIIHRHRHRRRLHYSISSTKDEN---EDEDDEHANH
        VS+ENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLF+HI+H HRHRRRLH SISSTKD N   EDE DEH NH
Subjt:  VSSENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFNHIIHRHRHRRRLHYSISSTKDEN---EDEDDEHANH

Query:  ITTSTAFSDEEHDSVSSTASSSSTSATFTDFTSTTTTTTTTFHF
        ITTSTAFSD+EHDSVSSTASSSSTSATFTDFTS  T TTTTFHF
Subjt:  ITTSTAFSDEEHDSVSSTASSSSTSATFTDFTSTTTTTTTTFHF

XP_008464390.1 PREDICTED: exosome complex component RRP4 homolog [Cucumis melo]3.0e-12275.95Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQIFLNHTQQTRLKNAQKTLESLSSKAN DASVAV DT+P +YEDGVLKGHGTLDLNGEVV TICGVVERVNKLIYVR+LRARYKPE+GDIVVGRVT
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGE----------------------KFWQPSARKSTYSIRDTAEYMQN-CKCYSSI------------------VYLSISLNIDV
        QYGIDLILGCNGFIWIG+                      KF      +    +    E  QN C+  ++I                  V LSISLNI+V
Subjt:  QYGIDLILGCNGFIWIGE----------------------KFWQPSARKSTYSIRDTAEYMQN-CKCYSSI------------------VYLSISLNIDV

Query:  HEMLGSEFFVLTAEKE
        HEMLGSEFFVL AEKE
Subjt:  HEMLGSEFFVLTAEKE

XP_038879414.1 exosome complex component RRP4 homolog [Benincasa hispida]2.8e-12077.48Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQI LNHTQ  RL+ A++TLESLSSKANSDASV VADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDI+YSQ AVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEKF-----------WQPSARKSTYSIRDTAE----------------YMQNCKCYSSIVYLSISLNIDVHEMLGSEFFVLTAE
        QYGIDLILGCNGFIWIGE                + ++  Y+  +T +                ++   +     V LSIS N+DVHEMLGSEFFVLTAE
Subjt:  QYGIDLILGCNGFIWIGEKF-----------WQPSARKSTYSIRDTAE----------------YMQNCKCYSSIVYLSISLNIDVHEMLGSEFFVLTAE

Query:  KE
        KE
Subjt:  KE

TrEMBL top hitse value%identityAlignment
A0A0A0LR52 NAC domain-containing protein4.9e-19587.96Show/hide
Query:  MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGE-
        MLSSMNLPDG QRRRTAVDELN+                  HD LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIG  
Subjt:  MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGE-

Query:  KFWQPSARKSTYSIRDTAEYMQNCKCYSSIVYLSISLNIDVHEMLGSEFFVLTAEKE---EIGMMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASII
          WQP+ARKSTYSIRDTAEYMQNCKCYSS+V+LSISLNIDVHEMLGSEFFVL AEKE   EIGMMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASII
Subjt:  KFWQPSARKSTYSIRDTAEYMQNCKCYSSIVYLSISLNIDVHEMLGSEFFVLTAEKE---EIGMMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASII

Query:  PEINGVWNLDPWDIPAAGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYR
        PEINGVW+LDPWDIPAAGGGDEEKYLFSKEAEE+NNNNNGEGGGIIGWSKSGYWKARGREKEIVS+ENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYR
Subjt:  PEINGVWNLDPWDIPAAGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYR

Query:  LIIPHSHSSTNKWVLCHILSPTNKLFNHIIHRHRHRRRLHYSISSTKDEN---EDEDDEHANHITTSTAFSDEEHDSVSSTASSSSTSATFTDFTSTTTT
        LIIPHSHSSTNKWVLCHILSPTNKLF+HI+H HRHRRRLH SISSTKD N   EDE DEH NHITTSTAFSD+EHDSVSSTASSSSTSATFTDFTS  T 
Subjt:  LIIPHSHSSTNKWVLCHILSPTNKLFNHIIHRHRHRRRLHYSISSTKDEN---EDEDDEHANHITTSTAFSDEEHDSVSSTASSSSTSATFTDFTSTTTT

Query:  TTTTFHF
        TTTTFHF
Subjt:  TTTTFHF

A0A1S3CLC6 exosome complex component RRP4 homolog1.4e-12275.95Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQIFLNHTQQTRLKNAQKTLESLSSKAN DASVAV DT+P +YEDGVLKGHGTLDLNGEVV TICGVVERVNKLIYVR+LRARYKPE+GDIVVGRVT
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGE----------------------KFWQPSARKSTYSIRDTAEYMQN-CKCYSSI------------------VYLSISLNIDV
        QYGIDLILGCNGFIWIG+                      KF      +    +    E  QN C+  ++I                  V LSISLNI+V
Subjt:  QYGIDLILGCNGFIWIGE----------------------KFWQPSARKSTYSIRDTAEYMQN-CKCYSSI------------------VYLSISLNIDV

Query:  HEMLGSEFFVLTAEKE
        HEMLGSEFFVL AEKE
Subjt:  HEMLGSEFFVLTAEKE

A0A5A7URG7 Exosome complex component RRP4-like protein1.8e-12075.39Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV
        MRGLQIFLNHTQQTRLKNAQKTLESLSSKAN DASVAV DT+P +YEDGVLKGHGTLDLNGEVV TICGVVERVNKLIYVR+LRAR YKPE+GDIVVGRV
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV

Query:  TEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        TEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
Subjt:  TEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGE----------------------KFWQPSARKSTYSIRDTAEYMQN-CKCYSSI------------------VYLSISLNID
        EQYGIDLILGCNGFIWIG+                      KF      +    +    E  QN C+  ++I                  V LSISLNI+
Subjt:  EQYGIDLILGCNGFIWIGE----------------------KFWQPSARKSTYSIRDTAEYMQN-CKCYSSI------------------VYLSISLNID

Query:  VHEMLGSEFFVLTAEKE
        VHEMLG EFFVL AEKE
Subjt:  VHEMLGSEFFVLTAEKE

A0A5D3BF59 Exosome complex component RRP4-like protein5.5e-22382.58Show/hide
Query:  QQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDI
        +QTRLKNAQKTLESLSSKAN DASVAV DT+P +YEDGVLKGHGTLDLNGEVV TICGVVERVNKLIYVR+LRARYKPE+GDIVVGRVTEVAPKRWRLDI
Subjt:  QQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDI

Query:  HYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
        HYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
Subjt:  HYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWIGEKFWQPSARKSTYSIRDTAEYMQNCKCYSSIVYLSISLNIDVHEMLGSEFFVLTAEKEEIGMMRGLPPGFRFEPTEEELVFEYLKCKVFSSALP
        GFIWIG         K   S +DT    Q  K          +    +HE + +              +R L         EEELVFEYLKCKVFSSALP
Subjt:  GFIWIGEKFWQPSARKSTYSIRDTAEYMQNCKCYSSIVYLSISLNIDVHEMLGSEFFVLTAEKEEIGMMRGLPPGFRFEPTEEELVFEYLKCKVFSSALP

Query:  ASIIPEINGVWNLDPWDIPAAGGGDEEKYLFS-KEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKNTLDFYTNNIRKMKKTGWV
        ASIIPEINGVWNLDPWDIPAAGGGDEEKYLFS KEAEEYNNNNNGE GGIIGWSKSGYWKARGREKEIVSSENGVALMGMK+TLDFYTNNIRKMKKTGWV
Subjt:  ASIIPEINGVWNLDPWDIPAAGGGDEEKYLFS-KEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKNTLDFYTNNIRKMKKTGWV

Query:  MHQYRLIIPHSHSSTNKWVLCHILSPTNKLFNHIIHRHRHRRRLHYSISSTKDEN---EDEDDEHANHITTSTAFSDEEHDSVSSTASSSSTSATFTDFT
        MHQYRLIIPHSHSSTNKWVLCHILSPTNKLF+HIIH HRHRRRL YSISSTKDEN   +DE DEH NHITTSTAFSD+EHDSVSSTASSSSTSATFTDFT
Subjt:  MHQYRLIIPHSHSSTNKWVLCHILSPTNKLFNHIIHRHRHRRRLHYSISSTKDEN---EDEDDEHANHITTSTAFSDEEHDSVSSTASSSSTSATFTDFT

Query:  STTTTTTTTFH
        S TTT TTTFH
Subjt:  STTTTTTTTFH

A0A6J1EXY1 exosome complex component RRP4 homolog5.7e-11975Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQ+ LN TQ+ RL+ A +TLES+SSKANSDASV VADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDI+YSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGE----------------------KFWQPSARKSTYSIRDTAEYMQN-CKCYSSI------------------VYLSISLNIDV
        QYGIDLILGCNGFIWIGE                      KF      +    I    E  QN C+  ++I                  V LSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGE----------------------KFWQPSARKSTYSIRDTAEYMQN-CKCYSSI------------------VYLSISLNIDV

Query:  HEMLGSEFFVLTAEKE
        HEMLGSEF VLTAEKE
Subjt:  HEMLGSEFFVLTAEKE

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp41.7e-4350.3Show/hide
Query:  LKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND
        ++GHGT   +G + A++ G V+RVNKLI V+ LR++Y PE+GD+++G++ EV PKRW++DI   Q+AVLMLSS+NLP GIQRR+   DEL MRS F+E D
Subjt:  LKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND

Query:  VICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGE
        ++ AEV+ +  DG + +  RS KYGKL  G  L V P LV R K H + L   G+D+IL  NG++W+ +
Subjt:  VICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGE

Q13868 Exosome complex component RRP45.8e-4450.73Show/hide
Query:  QTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIH
        + RL  A+K L     +      V   DTI    + G ++GHGT     +++A++ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ +
Subjt:  QTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIH

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI
        GFIWI
Subjt:  GFIWI

Q2KID0 Exosome complex component RRP42.0e-4450.24Show/hide
Query:  QTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIH
        + RL  A+K L     + +    V   DTI    + G ++GHGT     +++A++ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ +
Subjt:  QTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIH

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI
        GFIW+
Subjt:  GFIWI

Q8VBV3 Exosome complex component RRP48.9e-4550.73Show/hide
Query:  QTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIH
        + RL  A+K L     + +    V   DTI    + G ++GHGT     +++A++ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ +
Subjt:  QTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIH

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI
        GFIWI
Subjt:  GFIWI

Q9ZVT7 Exosome complex component RRP4 homolog5.7e-9258.06Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MR LQ+ L+ TQ+ R + A + L+SLSS ANSDASV V D+IP+N++D  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRARYKPEVGDIVVGRV 
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR++++++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGE--KFWQPSA--------------------------RKSTYSIRDTAEYMQN------CKCYSSIVYLSISLNIDVHEMLGS
        E  GIDLI+GCNGFIW+GE  +   P A                          R++   I +    + N       +     V LS S NID+H+MLGS
Subjt:  EQYGIDLILGCNGFIWIGE--KFWQPSA--------------------------RKSTYSIRDTAEYMQN------CKCYSSIVYLSISLNIDVHEMLGS

Query:  EFFVLTAEKE
        EF V+ AE E
Subjt:  EFFVLTAEKE

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 44.0e-9358.06Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MR LQ+ L+ TQ+ R + A + L+SLSS ANSDASV V D+IP+N++D  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRARYKPEVGDIVVGRV 
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR++++++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGE--KFWQPSA--------------------------RKSTYSIRDTAEYMQN------CKCYSSIVYLSISLNIDVHEMLGS
        E  GIDLI+GCNGFIW+GE  +   P A                          R++   I +    + N       +     V LS S NID+H+MLGS
Subjt:  EQYGIDLILGCNGFIWIGE--KFWQPSA--------------------------RKSTYSIRDTAEYMQN------CKCYSSIVYLSISLNIDVHEMLGS

Query:  EFFVLTAEKE
        EF V+ AE E
Subjt:  EFFVLTAEKE

AT1G76420.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein1.2e-2539.11Show/hide
Query:  RGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIP-AAGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEIV
        RGLPPGFRF PT+EEL+  YL  K+F   L    I E++ +   +PW++P  A  G+ E Y +S    +Y              + +GYWKA G++KE+ 
Subjt:  RGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIP-AAGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEIV

Query:  SSENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNK--WVLCHILSPTNK------LFNHIIHRHRH
        S   G  L+GMK TL FY     +  KT WVMH+YRL   HSH  T K  WV+C + + T        + N I + H H
Subjt:  SSENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNK--WVLCHILSPTNK------LFNHIIHRHRH

AT2G33480.2 NAC domain containing protein 412.3e-2437.5Show/hide
Query:  GMMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKE
        G++R LPPGFRF PT+EELV +YL+ KV    LPAS+IPE + V   DPWD+P  G  + E Y FS    +Y N N          + SGYWKA G +K+
Subjt:  GMMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKE

Query:  IVSSENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTN-KWVLCHILSPTNKLFNHIIHRHRHRRRLHYSISSTKDENEDEDDEHANHI
        I   +    ++GMK TL FY        +T WV+H+YRL+     S  N  WVLC +     K  N    R    +     + + K+   + + E  N  
Subjt:  IVSSENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTN-KWVLCHILSPTNKLFNHIIHRHRHRRRLHYSISSTKDENEDEDDEHANHI

Query:  TTSTAFSD
        +T   F D
Subjt:  TTSTAFSD

AT3G15510.1 NAC domain containing protein 21.0e-2440.35Show/hide
Query:  LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPA-AGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEIVSS
        LPPGFRF PT+EELV  YLK K  S+ LP +II E++ ++  DPW++PA A  G++E Y FS    +Y N            + SGYWKA G +K +++S
Subjt:  LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPA-AGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEIVSS

Query:  ENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYRLI------IPHSHSSTNK--------WVLCHILSPTN
        + G   +G+K  L FY+    K  K+ W+MH+YRLI       P      NK        WVLC I    N
Subjt:  ENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYRLI------IPHSHSSTNK--------WVLCHILSPTN

AT5G13180.1 NAC domain containing protein 833.6e-2536.97Show/hide
Query:  GMMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKE
        G++R LPPGFRF PT+EELV +YLK KV SS LPASIIPE + V   DPWD+P  G  ++E+Y FS    +Y N N          + SGYWKA G +K 
Subjt:  GMMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKE

Query:  IVSSENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYRLII--PHSHSSTNKWVLCHILSPTNKLFNHIIHRHRHRRRLHYSISSTKDENEDEDDEHANH
        +V+S  G  ++G+K TL FY        +T W+MH+YRL    P S   T  WVLC I                 ++R     +  K++++D D  +  H
Subjt:  IVSSENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYRLII--PHSHSSTNKWVLCHILSPTNKLFNHIIHRHRHRRRLHYSISSTKDENEDEDDEHANH

Query:  ITTSTAFSDEEHDSVSSTASSSSTSATFTDFTSTTTTT
           +   S ++ + +++  +   T   F DF     TT
Subjt:  ITTSTAFSDEEHDSVSSTASSSSTSATFTDFTSTTTTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTCTACAGATTTTCTTGAATCATACCCAACAGACGCGGCTTAAGAATGCCCAAAAAACGCTTGAGTCTCTCTCATCAAAGGCTAATTCTGATGCTTCAGTTGC
AGTTGCTGATACTATTCCTCTCAATTATGAGGATGGAGTTCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTGCTACTATTTGTGGAGTGGTTGAGCGAG
TTAATAAGCTTATCTATGTACGTGCCTTACGTGCCAGATATAAACCAGAGGTCGGTGATATTGTGGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGAT
ATACATTATAGCCAAGATGCTGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTTGATGAACTCAACATGCGGAGCATTTTTGA
AGAAAACGATGTTATTTGTGCAGAAGTACGTGGTTTTCAGCATGATGGGCTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAACTTCTAACAG
TTTCACCATATCTAGTAAAGAGACGCAAACAACATTTCCATCATTTGGAGCAGTATGGTATTGACTTAATACTCGGATGCAATGGATTTATCTGGATTGGGGAGAAATTT
TGGCAACCAAGTGCAAGAAAGAGTACATACTCCATTAGAGACACGGCAGAATATATGCAGAACTGCAAATGCTATTCGAGTATTGTCTATCTTAGTATTTCTCTGAACAT
CGATGTACATGAAATGCTCGGTTCGGAGTTCTTTGTCCTCACGGCAGAAAAAGAGGAAATAGGAATGATGAGAGGATTGCCACCTGGGTTTCGGTTTGAGCCAACAGAAG
AAGAGCTTGTGTTTGAGTATCTAAAATGCAAGGTCTTCTCCTCTGCTTTGCCTGCTTCTATCATTCCAGAGATCAATGGCGTTTGGAATTTGGATCCTTGGGATATTCCT
GCTGCAGGTGGTGGGGATGAAGAGAAATACTTATTCAGCAAGGAGGCAGAGGAATATAACAATAACAATAATGGAGAAGGAGGAGGAATAATTGGATGGAGTAAGAGTGG
ATATTGGAAGGCGAGAGGAAGAGAGAAGGAAATAGTAAGTAGTGAGAATGGAGTGGCATTAATGGGCATGAAGAACACTCTGGATTTCTACACCAACAACATCAGGAAGA
TGAAGAAGACAGGTTGGGTGATGCATCAGTATCGTCTCATAATACCACATTCTCATTCTTCAACTAACAAATGGGTTCTTTGCCACATCCTTTCTCCTACTAACAAATTA
TTCAATCATATTATTCACCGCCACCGCCACCGCCGCCGCCTCCATTATTCTATTTCTTCTACAAAGGATGAGAATGAGGATGAGGATGATGAGCATGCGAATCACATCAC
TACTTCCACCGCCTTCTCCGACGAAGAACATGATTCTGTTTCCTCCACCGCCTCATCCTCTTCAACTTCCGCCACCTTCACCGATTTCACATCTACAACTACTACTACTA
CTACTACATTCCACTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGTCTACAGATTTTCTTGAATCATACCCAACAGACGCGGCTTAAGAATGCCCAAAAAACGCTTGAGTCTCTCTCATCAAAGGCTAATTCTGATGCTTCAGTTGC
AGTTGCTGATACTATTCCTCTCAATTATGAGGATGGAGTTCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTGCTACTATTTGTGGAGTGGTTGAGCGAG
TTAATAAGCTTATCTATGTACGTGCCTTACGTGCCAGATATAAACCAGAGGTCGGTGATATTGTGGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGAT
ATACATTATAGCCAAGATGCTGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTTGATGAACTCAACATGCGGAGCATTTTTGA
AGAAAACGATGTTATTTGTGCAGAAGTACGTGGTTTTCAGCATGATGGGCTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAACTTCTAACAG
TTTCACCATATCTAGTAAAGAGACGCAAACAACATTTCCATCATTTGGAGCAGTATGGTATTGACTTAATACTCGGATGCAATGGATTTATCTGGATTGGGGAGAAATTT
TGGCAACCAAGTGCAAGAAAGAGTACATACTCCATTAGAGACACGGCAGAATATATGCAGAACTGCAAATGCTATTCGAGTATTGTCTATCTTAGTATTTCTCTGAACAT
CGATGTACATGAAATGCTCGGTTCGGAGTTCTTTGTCCTCACGGCAGAAAAAGAGGAAATAGGAATGATGAGAGGATTGCCACCTGGGTTTCGGTTTGAGCCAACAGAAG
AAGAGCTTGTGTTTGAGTATCTAAAATGCAAGGTCTTCTCCTCTGCTTTGCCTGCTTCTATCATTCCAGAGATCAATGGCGTTTGGAATTTGGATCCTTGGGATATTCCT
GCTGCAGGTGGTGGGGATGAAGAGAAATACTTATTCAGCAAGGAGGCAGAGGAATATAACAATAACAATAATGGAGAAGGAGGAGGAATAATTGGATGGAGTAAGAGTGG
ATATTGGAAGGCGAGAGGAAGAGAGAAGGAAATAGTAAGTAGTGAGAATGGAGTGGCATTAATGGGCATGAAGAACACTCTGGATTTCTACACCAACAACATCAGGAAGA
TGAAGAAGACAGGTTGGGTGATGCATCAGTATCGTCTCATAATACCACATTCTCATTCTTCAACTAACAAATGGGTTCTTTGCCACATCCTTTCTCCTACTAACAAATTA
TTCAATCATATTATTCACCGCCACCGCCACCGCCGCCGCCTCCATTATTCTATTTCTTCTACAAAGGATGAGAATGAGGATGAGGATGATGAGCATGCGAATCACATCAC
TACTTCCACCGCCTTCTCCGACGAAGAACATGATTCTGTTTCCTCCACCGCCTCATCCTCTTCAACTTCCGCCACCTTCACCGATTTCACATCTACAACTACTACTACTA
CTACTACATTCCACTTCTAA
Protein sequenceShow/hide protein sequence
MRGLQIFLNHTQQTRLKNAQKTLESLSSKANSDASVAVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLD
IHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEKF
WQPSARKSTYSIRDTAEYMQNCKCYSSIVYLSISLNIDVHEMLGSEFFVLTAEKEEIGMMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIP
AAGGGDEEKYLFSKEAEEYNNNNNGEGGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKNTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKL
FNHIIHRHRHRRRLHYSISSTKDENEDEDDEHANHITTSTAFSDEEHDSVSSTASSSSTSATFTDFTSTTTTTTTTFHF