; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021858 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021858
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRRM domain-containing protein
Genome locationchr03:7578785..7581807
RNA-Seq ExpressionPI0021858
SyntenyPI0021858
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140894.1 uncharacterized RNA-binding protein C1827.05c [Cucumis sativus]6.6e-11095.75Show/hide
Query:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKA+KAMKKKL+KATPLSSDKKESADFLPLEGGPGRKL VQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYVEFE
Subjt:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYE PEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_008456579.1 PREDICTED: uncharacterized RNA-binding protein C1827.05c [Cucumis melo]4.9e-11398.58Show/hide
Query:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKL KATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
Subjt:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTL EHKKLVDRILKRDQARQKRIRAAGIDYE PEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022922397.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]8.9e-10792.92Show/hide
Query:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKL+KAT L S+KKESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EF+
Subjt:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYE PEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022993750.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]8.9e-10791.98Show/hide
Query:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKLSKAT   SDKKESADFLPLEGGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI+PEHVHPKLWKGFNYRH PL+WSELERKQHNKERTL+EHKKLV+RILKRDQAR+KRIRAAGIDYE PEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

XP_038885284.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Benincasa hispida]1.1e-10995.28Show/hide
Query:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKLSKAT LS  K+ESADFLPLEGGPGRKLP QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTL+EHKKLVDRI+KRDQARQKRIRAAGIDYE PEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

TrEMBL top hitse value%identityAlignment
A0A0A0KCE3 RRM domain-containing protein3.4e-12885.96Show/hide
Query:  MAKTKSKDKTQRFNLSSTYVLRSLHSLELSHSVAANSTAFSLLPSTPFSGH---------------------SMGAKAKKAMKKKLSKATPLSSDKKESA
        MAK KS+ KTQRFN SSTYVLRSLHSLELSHS AANS+AF LLPS+P SG                      SMGAKA+KAMKKKL+KATPLSSDKKESA
Subjt:  MAKTKSKDKTQRFNLSSTYVLRSLHSLELSHSVAANSTAFSLLPSTPFSGH---------------------SMGAKAKKAMKKKLSKATPLSSDKKESA

Query:  DFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLI
        DFLPLEGGPGRKL VQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLI
Subjt:  DFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLI

Query:  APEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSVQPTPKKIKFDED
         PEHVHPKLWKGFNYRH PLNWSELERK HNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYE PEIVG VQPTPKKIKFDED
Subjt:  APEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSVQPTPKKIKFDED

A0A1S3C4U7 uncharacterized RNA-binding protein C1827.05c2.4e-11398.58Show/hide
Query:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKL KATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
Subjt:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTL EHKKLVDRILKRDQARQKRIRAAGIDYE PEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1E350 uncharacterized RNA-binding protein C1827.05c-like4.3e-10792.92Show/hide
Query:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKL+KAT L S+KKESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EF+
Subjt:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYE PEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1JIS9 uncharacterized RNA-binding protein C1827.05c-like5.3e-10591.51Show/hide
Query:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKLSKAT L S++ ESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGY+EF+
Subjt:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKERTL EH+KLV+RILKR+QARQKRIRAA IDYE PEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1JZE0 uncharacterized RNA-binding protein C1827.05c-like4.3e-10791.98Show/hide
Query:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKLSKAT   SDKKESADFLPLEGGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI+PEHVHPKLWKGFNYRH PL+WSELERKQHNKERTL+EHKKLV+RILKRDQAR+KRIRAAGIDYE PEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

SwissProt top hitse value%identityAlignment
O74978 Uncharacterized RNA-binding protein C1827.05c1.6e-2940.38Show/hide
Query:  RKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW
        +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RN+KTG S+H+ ++EFES +VA +VA++MHNYLLY  +L+  +I  + VH  ++
Subjt:  RKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW

Query:  KGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYES
        KG +     +  + + R QH K  + E+  KL+ R  ++ + ++++++  GI  ES
Subjt:  KGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYES

Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein3.6e-2639.1Show/hide
Query:  QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNY
        Q+  + T  V+Y+G +P   +E ++  +F QFG V R R++R+KKTG S+ +G+VEFES +VAKI A++M+NYL  E +LK H I PE VH +L++ +  
Subjt:  QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNY

Query:  RHTPLNWSELER-KQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIV
         H P         K++N+ R+L +  ++ +R  K+++  +KR+   GIDY  P +V
Subjt:  RHTPLNWSELER-KQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIV

Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like2.5e-2744.76Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE
        V+YIG IP   +E ++  +F QFG V RLR++R+KKTG S+ + YVEFE  EVAKIVAD+M+NYL  E +LK   + PE VHP+L+ G   +        
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE

Query:  LERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESP
        + R  +NK R+  E KK+  R+L ++   +KR+   GIDY+ P
Subjt:  LERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESP

Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like3.8e-2842.05Show/hide
Query:  LSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLY
        LS D K   DF        RK   +K    T  V+YIG IP    E +++ +F QFG V RLR++R+KKTG S+ + YVE+E  EVAKIVAD+M+NYL  
Subjt:  LSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLY

Query:  EHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESP
        E +LK   + PE VHP+L+ G N R        + R  +N +R  EE KK+  R++ ++   +KR+   GIDY+ P
Subjt:  EHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESP

Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein1.3e-2844.3Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE
        VLY+G +P G FE +++ +F QFGKV RLR++R+KKTG S+ +G+VEFE  EVAKIVA++M+NYL+ E I+K H+I PE VH KL+ G         +  
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE

Query:  LERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV
        + R  +NK  T ++ KK+  ++L ++   +KR+ A GIDY+ P     +
Subjt:  LERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYESPEIVGSV

Arabidopsis top hitse value%identityAlignment
AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.9e-0636.23Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I +++ TG++R FG+V F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHN

AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.9e-0636.23Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I +++ TG++R FG+V F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHN

AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.5e-0626.47Show/hide
Query:  DKKESADFLPLEGGPGRKLPVQ-KPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEH
        +++E  D +  E    +K  V+   L    + +Y+G IP    E +++GF G  G+V  +RI R K +G  + + +V F S ++A    D+++N      
Subjt:  DKKESADFLPLEGGPGRKLPVQ-KPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEH

Query:  ILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQ
         +K      +H   +L+ G    + P NW E + K+
Subjt:  ILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQ

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-0628.18Show/hide
Query:  PVQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHI
        P ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R++ TG++R FG++ F  P VA+ V    H                   +L  H 
Subjt:  PVQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHI

Query:  LKVHLIAPEH
          +HLI+P H
Subjt:  LKVHLIAPEH

AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-7361.09Show/hide
Query:  MGAKAKKAMKKKLSKAT--------PLSSDKKESADFLPLEGGPGRKLPV-QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS
        MGAKAKKA+KK + K          PL  + K SADFLPLEGGP RK PV   PL++ ATVLYIGRIPHGF+E E+E FF QFG VKR+R+ARNKKTGKS
Subjt:  MGAKAKKAMKKKLSKAT--------PLSSDKKESADFLPLEGGPGRKLPV-QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS

Query:  RHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDY
        +HFG+++FE PEVA+I A +M++YLL EH+LKVH+I PE+V P LW+GF     P++  ++ER+Q NKERTLEEH+K++ +I+K+DQ R+KRI AAGI+Y
Subjt:  RHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDY

Query:  ESPEIVGSVQPTPKKIKFDED
        E PE+VG+ QP PK+IKF E+
Subjt:  ESPEIVGSVQPTPKKIKFDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGACTAAGTCAAAGGATAAAACGCAGCGTTTTAACCTGTCTTCGACCTACGTGCTACGTAGCCTCCATTCTCTTGAGCTCTCACATTCCGTCGCCGCCAACTC
CACTGCTTTCTCTCTTCTTCCTTCTACTCCTTTTTCAGGTCATTCAATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTCAGCAAGGCTACTCCTCTCTCATCCG
ACAAGAAGGAATCTGCCGATTTCTTGCCGTTGGAGGGTGGTCCTGGGCGTAAGTTACCGGTACAGAAGCCATTGGAAAGTACTGCTACTGTTCTTTACATTGGCCGTATA
CCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTCGGACAGTTTGGGAAAGTCAAAAGATTAAGAATTGCACGAAATAAAAAGACGGGGAAGTCGAGGCATTTTGG
CTACGTTGAATTTGAATCTCCAGAGGTAGCAAAAATTGTAGCTGATTCCATGCATAACTATTTGTTGTATGAACACATTCTGAAAGTCCATCTAATTGCTCCCGAGCATG
TTCATCCCAAACTATGGAAAGGTTTTAACTATCGCCATACGCCTTTAAACTGGTCTGAACTTGAGCGTAAGCAGCATAACAAGGAAAGGACATTGGAGGAACATAAGAAG
TTGGTGGATAGAATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGATAAGGGCTGCTGGGATCGATTATGAGAGTCCAGAAATTGTGGGTAGTGTCCAACCAACTCCGAA
GAAGATCAAATTCGATGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGACTAAGTCAAAGGATAAAACGCAGCGTTTTAACCTGTCTTCGACCTACGTGCTACGTAGCCTCCATTCTCTTGAGCTCTCACATTCCGTCGCCGCCAACTC
CACTGCTTTCTCTCTTCTTCCTTCTACTCCTTTTTCAGGTCATTCAATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTCAGCAAGGCTACTCCTCTCTCATCCG
ACAAGAAGGAATCTGCCGATTTCTTGCCGTTGGAGGGTGGTCCTGGGCGTAAGTTACCGGTACAGAAGCCATTGGAAAGTACTGCTACTGTTCTTTACATTGGCCGTATA
CCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTCGGACAGTTTGGGAAAGTCAAAAGATTAAGAATTGCACGAAATAAAAAGACGGGGAAGTCGAGGCATTTTGG
CTACGTTGAATTTGAATCTCCAGAGGTAGCAAAAATTGTAGCTGATTCCATGCATAACTATTTGTTGTATGAACACATTCTGAAAGTCCATCTAATTGCTCCCGAGCATG
TTCATCCCAAACTATGGAAAGGTTTTAACTATCGCCATACGCCTTTAAACTGGTCTGAACTTGAGCGTAAGCAGCATAACAAGGAAAGGACATTGGAGGAACATAAGAAG
TTGGTGGATAGAATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGATAAGGGCTGCTGGGATCGATTATGAGAGTCCAGAAATTGTGGGTAGTGTCCAACCAACTCCGAA
GAAGATCAAATTCGATGAAGATTAG
Protein sequenceShow/hide protein sequence
MAKTKSKDKTQRFNLSSTYVLRSLHSLELSHSVAANSTAFSLLPSTPFSGHSMGAKAKKAMKKKLSKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRI
PHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLEEHKK
LVDRILKRDQARQKRIRAAGIDYESPEIVGSVQPTPKKIKFDED