CuGenDBv2

Gene ID	PI0021888
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	DUF4283 domain-containing protein
Genome location	chr11:13752159..13752617
RNA-Seq Expression	PI0021888
Synteny	PI0021888
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	IPR025558 - Domain of unknown function DUF4283 IPR040256 - Uncharacterized protein At4g02000-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0062320.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]

2.7e-63

75.82

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Query:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP
        MP IT+LEN LICFQFRR  SVEWILSRGPWHLGGKPML RKW PGIVPE+FVFN VPVWI LG +PMELWTE+G+AV+A A+GK +SLDLATKERRRL 
Subjt:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP

Query:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC
        +ARVCVELEGG + P+EITVNLRGV  +V V YEWKP  CN C  FGHS  KC
Subjt:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]

2.5e-61

73.38

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Query:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP
        MPTIT+LEN LICFQFRRPNSVEWILSRGPWHLGGKPMLLRKW  GIVPE+FVFN VPVWI+LG IPMELWTE+ +A++AS +GK ++LDLATKE  RL 
Subjt:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP

Query:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKCP
        +ARVCV+LEG  +   EITVNLRGV  +V V YEWKP  CN C   GHS GKCP
Subjt:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKCP

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]

1.4e-59

73.2

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Query:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP
        MP IT+LEN LICFQFRR  SVEWILSRGPWHL  K MLLRKW PGIVPE FVFN VPVWI+LG +PMELWTE+G+AV+ASA+GK +SLDLATKERRRL 
Subjt:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP

Query:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC
        +ARVCVELE G + P EITV+LRGV  +V V YEWKP  CN C  FGHS   C
Subjt:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC

TYK26656.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]

1.0e-62

75.16

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Query:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP
        MP IT+LEN LICFQFRR  SVEWILSRGPWHLGGKPML RKW P IVPE+FVFN VPVWI LG +PMELWTE+G+AV+A A+GK +SLDLATKERRRL 
Subjt:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP

Query:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC
        +ARVCVELEGG + P+EITVNLRGV  +V V YEWKP  CN C  FGHS  KC
Subjt:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC

XP_008460524.1 PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo]

2.7e-63

75.82

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Query:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP
        MP IT+LEN LICFQFRR  SVEWILSRGPWHLGGKPML RKW PGIVPE+FVFN VPVWI LG +PMELWTE+G+AV+A A+GK +SLDLATKERRRL 
Subjt:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP

Query:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC
        +ARVCVELEGG + P+EITVNLRGV  +V V YEWKP  CN C  FGHS  KC
Subjt:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CC83 uncharacterized protein LOC103499323

1.3e-63

75.82

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Query:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP
        MP IT+LEN LICFQFRR  SVEWILSRGPWHLGGKPML RKW PGIVPE+FVFN VPVWI LG +PMELWTE+G+AV+A A+GK +SLDLATKERRRL 
Subjt:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP

Query:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC
        +ARVCVELEGG + P+EITVNLRGV  +V V YEWKP  CN C  FGHS  KC
Subjt:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC

A0A5A7TWG5 Reverse transcriptase domain-containing protein

6.6e-60

73.2

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Query:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP
        MP IT+LEN LICFQFRR  SVEWILSRGPWHL  K MLLRKW PGIVPE FVFN VPVWI+LG +PMELWTE+G+AV+ASA+GK +SLDLATKERRRL 
Subjt:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP

Query:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC
        +ARVCVELE G + P EITV+LRGV  +V V YEWKP  CN C  FGHS   C
Subjt:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC

A0A5A7V507 DUF4283 domain-containing protein

1.3e-63

75.82

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Query:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP
        MP IT+LEN LICFQFRR  SVEWILSRGPWHLGGKPML RKW PGIVPE+FVFN VPVWI LG +PMELWTE+G+AV+A A+GK +SLDLATKERRRL 
Subjt:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP

Query:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC
        +ARVCVELEGG + P+EITVNLRGV  +V V YEWKP  CN C  FGHS  KC
Subjt:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein

1.2e-61

73.38

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Query:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP
        MPTIT+LEN LICFQFRRPNSVEWILSRGPWHLGGKPMLLRKW  GIVPE+FVFN VPVWI+LG IPMELWTE+ +A++AS +GK ++LDLATKE  RL 
Subjt:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP

Query:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKCP
        +ARVCV+LEG  +   EITVNLRGV  +V V YEWKP  CN C   GHS GKCP
Subjt:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKCP

A0A5D3DSG9 DUF4283 domain-containing protein

4.9e-63

75.16

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Query:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP
        MP IT+LEN LICFQFRR  SVEWILSRGPWHLGGKPML RKW P IVPE+FVFN VPVWI LG +PMELWTE+G+AV+A A+GK +SLDLATKERRRL 
Subjt:  MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLP

Query:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC
        +ARVCVELEGG + P+EITVNLRGV  +V V YEWKP  CN C  FGHS  KC
Subjt:  FARVCVELEGGVDFPTEITVNLRGV--SVPVTYEWKPYMCNSCHLFGHSVGKC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G01050.1 zinc ion binding;nucleic acid binding

6.4e-15

29.33

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Query:  TITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLPFA
        T+  L       +F         L+ GPW + G  +L++ W     P        PVW++L  IP   +    +  IA  +G+ L +D+ T    +  FA
Subjt:  TITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLPFA

Query:  RVCVELEGGVDFPTEITVNLRGVSVPVTYEWKPYMCNSCHLFGHSVGKCP
        RVC+E+   +  P + TV + G    V YE    +C+SC ++GH V  CP
Subjt:  RVCVELEGGVDFPTEITVNLRGVSVPVTYEWKPYMCNSCHLFGHSVGKCP

AT2G07760.1 Zinc knuckle (CCHC-type) family protein

1.3e-10

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Query:  ILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLPFARVCVELEGGVDFPTEI-TVNLR
        I  RG WH+    M +  W      +    + +PVW+ L  IP  L++  GI+ IAS +G  ++      +   +  A + VE+E    FP  I  V+ +
Subjt:  ILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLPFARVCVELEGGVDFPTEI-TVNLR

Query:  G--VSVPVTYEWKPYMCNSCHLFGHSVGKC
        G    V V Y W P  C  C   GH   +C
Subjt:  G--VSVPVTYEWKPYMCNSCHLFGHSVGKC

AT5G28823.1 FUNCTIONS IN: molecular_function unknown

7.6e-08

28.07

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Query:  RGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLPFARVCVELEGGVDFPTEITVNLRGVS-
        R  WH+    M +  W P    E      +P W+ L  IP +L++  GI  IAS IG+++       +  ++  A++ VE++    FP  + +     S 
Subjt:  RGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLPFARVCVELEGGVDFPTEITVNLRGVS-

Query:  --VPVTYEWKPYMC
          V V Y W P  C
Subjt:  --VPVTYEWKPYMC

Sequences

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CDS sequence

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ATGCCAACCATTACGATGCTAGAGAATGGGCTTATTTGCTTTCAATTTCGTCGTCCCAATTCGGTAGAGTGGATTCTATCTCGTGGACCCTGGCATCTTGGTGGGAAACC
TATGCTCCTCCGCAAATGGGTTCCAGGTATTGTCCCTGAAACCTTTGTCTTTAATTTTGTTCCTGTGTGGATCAAACTAGGTTGTATTCCCATGGAGTTGTGGACTGAGT
CAGGTATTGCAGTAATTGCTAGTGCTATTGGTAAATCTCTTTCTTTAGATTTGGCCACTAAGGAGAGACGTAGACTGCCGTTTGCTAGGGTGTGTGTGGAATTAGAAGGG
GGTGTTGATTTTCCTACTGAGATCACAGTTAATTTGAGGGGTGTGAGTGTACCAGTTACCTATGAGTGGAAACCCTATATGTGTAATTCCTGTCATTTGTTTGGTCATTC
TGTTGGTAAGTGTCCTTAG

mRNA sequence

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Protein sequence

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MPTITMLENGLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWVPGIVPETFVFNFVPVWIKLGCIPMELWTESGIAVIASAIGKSLSLDLATKERRRLPFARVCVELEG
GVDFPTEITVNLRGVSVPVTYEWKPYMCNSCHLFGHSVGKCP

PI0021888 (gene) of Melon (PI 482460) v1 genome