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PI0021904 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021904
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLeucine-rich repeat family protein
Genome locationchr11:16924792..16925832
RNA-Seq ExpressionPI0021904
SyntenyPI0021904
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038693737.1 pollen-specific leucine-rich repeat extensin-like protein 3 [Tripterygium wilfordii]7.9e-0438.12Show/hide
Query:  KSPVIASTPPPKVKKARVDVAKQPPPLKIIHPSSRPIKRAPPSVQD---------KSSRSQPP--RSSLPIPTTPSLPIISPRHSPLPHIRSPINIPHLF
        KSP +  +PPP V        + PPP   IH    P++  PP V            S RS PP  RS  P  T+PS P   P HSP P +RSP   P L 
Subjt:  KSPVIASTPPPKVKKARVDVAKQPPPLKIIHPSSRPIKRAPPSVQD---------KSSRSQPP--RSSLPIPTTPSLPIISPRHSPLPHIRSPINIPHLF

Query:  PRPPTPPPTKSTSPLLPSKASSPRRIGPLSPLILSPILDLITLRHDQSTVATKVVEA---SPPIPHPVDPPPVSLPSPPPP
          PP+P P+ S  P  P   S P  +   SPL  SPI       H               SPP+P P  PPPV  PSPPPP
Subjt:  PRPPTPPPTKSTSPLLPSKASSPRRIGPLSPLILSPILDLITLRHDQSTVATKVVEA---SPPIPHPVDPPPVSLPSPPPP
TrEMBL top hitse value%identityAlignment
A0A7J7BZD1 Leucine-rich repeat family protein3.8e-0438.12Show/hide
Query:  KSPVIASTPPPKVKKARVDVAKQPPPLKIIHPSSRPIKRAPPSVQD---------KSSRSQPP--RSSLPIPTTPSLPIISPRHSPLPHIRSPINIPHLF
        KSP +  +PPP V        + PPP   IH    P++  PP V            S RS PP  RS  P  T+PS P   P HSP P +RSP   P L 
Subjt:  KSPVIASTPPPKVKKARVDVAKQPPPLKIIHPSSRPIKRAPPSVQD---------KSSRSQPP--RSSLPIPTTPSLPIISPRHSPLPHIRSPINIPHLF

Query:  PRPPTPPPTKSTSPLLPSKASSPRRIGPLSPLILSPILDLITLRHDQSTVATKVVEA---SPPIPHPVDPPPVSLPSPPPP
          PP+P P+ S  P  P   S P  +   SPL  SPI       H               SPP+P P  PPPV  PSPPPP
Subjt:  PRPPTPPPTKSTSPLLPSKASSPRRIGPLSPLILSPILDLITLRHDQSTVATKVVEA---SPPIPHPVDPPPVSLPSPPPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAAGCAGAACGCAAACGGAAGTCCCCAGTCATCGCATCAACCCCCCCACCTAAAGTAAAAAAAGCAAGGGTTGATGTGGCGAAGCAGCCACCACCACTGAAAAT
TATCCACCCCTCATCCCGTCCAATCAAGCGAGCTCCCCCATCAGTCCAAGACAAATCCAGCCGCTCTCAGCCTCCCCGCTCTTCTTTGCCCATCCCAACCACCCCATCTT
TGCCAATCATCTCCCCCCGCCATTCACCTCTCCCTCACATTCGTTCCCCCATCAACATCCCTCACCTTTTTCCACGACCGCCTACCCCTCCACCCACAAAATCTACTTCT
CCACTCCTTCCTTCAAAAGCCTCCTCACCTAGGCGAATAGGGCCTCTTTCGCCTCTCATTCTTTCGCCCATCCTGGACCTTATAACACTTCGCCATGACCAGTCCACGGT
CGCCACTAAGGTCGTTGAGGCTTCCCCGCCCATCCCCCACCCAGTAGACCCTCCCCCGGTCTCCCTACCATCACCACCGCCACCTGCCTTGGATACCGCACAGCACGTTG
ATGACCCACACATTAAGGACAAAAACCCTATCCTTAATGAAGTTGGTGAGACAGCTTCTTCGGCGCATACCACCACCGCCCCATCTTCCACCACACCTGGAGAAGATGAA
GATTTGGGCGAAATCTTAGTTCCCCTTGTCTGTAAGCCAATGATTGAACACTTTGACCAAATATTGGCTAACCAAGGGGACCAGGCGACGCAACTCCGCAATTTGCAAGA
TACAGTCAATCAATTGCAACGCCCCAACGCCGAGAACCTTGTGACGCCCGCTTCTCAAGAAGATATCAATGTCTTGCGAAGCGAACTGAAGGAACTTTCGGCGAACCTTG
TCCAGCTCTCCATCGCCGTATCCAATCTGTCCACTTCCGTCTTTAGCCTCACCTCCCTGGTCATAGCCCAATCTGAGATGATGAGGCAAATAGTTGTGGCGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCAAGCAGAACGCAAACGGAAGTCCCCAGTCATCGCATCAACCCCCCCACCTAAAGTAAAAAAAGCAAGGGTTGATGTGGCGAAGCAGCCACCACCACTGAAAAT
TATCCACCCCTCATCCCGTCCAATCAAGCGAGCTCCCCCATCAGTCCAAGACAAATCCAGCCGCTCTCAGCCTCCCCGCTCTTCTTTGCCCATCCCAACCACCCCATCTT
TGCCAATCATCTCCCCCCGCCATTCACCTCTCCCTCACATTCGTTCCCCCATCAACATCCCTCACCTTTTTCCACGACCGCCTACCCCTCCACCCACAAAATCTACTTCT
CCACTCCTTCCTTCAAAAGCCTCCTCACCTAGGCGAATAGGGCCTCTTTCGCCTCTCATTCTTTCGCCCATCCTGGACCTTATAACACTTCGCCATGACCAGTCCACGGT
CGCCACTAAGGTCGTTGAGGCTTCCCCGCCCATCCCCCACCCAGTAGACCCTCCCCCGGTCTCCCTACCATCACCACCGCCACCTGCCTTGGATACCGCACAGCACGTTG
ATGACCCACACATTAAGGACAAAAACCCTATCCTTAATGAAGTTGGTGAGACAGCTTCTTCGGCGCATACCACCACCGCCCCATCTTCCACCACACCTGGAGAAGATGAA
GATTTGGGCGAAATCTTAGTTCCCCTTGTCTGTAAGCCAATGATTGAACACTTTGACCAAATATTGGCTAACCAAGGGGACCAGGCGACGCAACTCCGCAATTTGCAAGA
TACAGTCAATCAATTGCAACGCCCCAACGCCGAGAACCTTGTGACGCCCGCTTCTCAAGAAGATATCAATGTCTTGCGAAGCGAACTGAAGGAACTTTCGGCGAACCTTG
TCCAGCTCTCCATCGCCGTATCCAATCTGTCCACTTCCGTCTTTAGCCTCACCTCCCTGGTCATAGCCCAATCTGAGATGATGAGGCAAATAGTTGTGGCGACATGA
Protein sequenceShow/hide protein sequence
MAQAERKRKSPVIASTPPPKVKKARVDVAKQPPPLKIIHPSSRPIKRAPPSVQDKSSRSQPPRSSLPIPTTPSLPIISPRHSPLPHIRSPINIPHLFPRPPTPPPTKSTS
PLLPSKASSPRRIGPLSPLILSPILDLITLRHDQSTVATKVVEASPPIPHPVDPPPVSLPSPPPPALDTAQHVDDPHIKDKNPILNEVGETASSAHTTTAPSSTTPGEDE
DLGEILVPLVCKPMIEHFDQILANQGDQATQLRNLQDTVNQLQRPNAENLVTPASQEDINVLRSELKELSANLVQLSIAVSNLSTSVFSLTSLVIAQSEMMRQIVVAT