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PI0021917 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021917
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDynein light chain
Genome locationchr02:15715647..15716448
RNA-Seq ExpressionPI0021917
SyntenyPI0021917
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150050.1 dynein light chain 1, cytoplasmic [Cucumis sativus]1.9e-4094.57Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS
        MLEGKATVKETDMSEKMQMHAMASAS ALDLFDVSD LSLASHIKKDFDGTYG+GWQCVVGSNFGCFFTHS G+FIYFSLETLNFLIFKSPS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS

XP_008462685.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]1.3e-4195.65Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS
        MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLAS+IKKDFDGTYG+GWQCVVGSNFGCFFTHS G+FIYFSLETLNFLIFKSPS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS

XP_017441827.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Vigna angularis]9.2e-3580.43Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS
        MLEGKA VKETDMS KMQ+HAMA+ASHALDL+DVSD +S+A+HIKK+FD  YGNGWQCVVGSNFGC+FTHS G+FIYF+LETLNFLIFK  S
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS

XP_022933771.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]4.4e-3786.96Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS
        MLEGKATVK+TDMSEKMQ+HA ASASHALDLFDVSD LSLA+HIKK+FD +YG+GWQCVVGSNFGCFFTHSKG+FIYFSLETLNFLIFK+ S
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS

XP_038878771.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]7.3e-4093.48Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS
        MLEGKATVKETDMSEKMQ HAMASASHALDLFDVSD LSLA+HIKKDFD  YG+GWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS

TrEMBL top hitse value%identityAlignment
A0A0L9VRV1 Dynein light chain4.5e-3580.43Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS
        MLEGKA VKETDMS KMQ+HAMA+ASHALDL+DVSD +S+A+HIKK+FD  YGNGWQCVVGSNFGC+FTHS G+FIYF+LETLNFLIFK  S
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS

A0A1S3CJ38 Dynein light chain6.4e-4295.65Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS
        MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLAS+IKKDFDGTYG+GWQCVVGSNFGCFFTHS G+FIYFSLETLNFLIFKSPS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS

A0A1S3UQ79 Dynein light chain4.5e-3580.43Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS
        MLEGKA VKETDMS KMQ+HAMA+ASHALDL+DVSD +S+A+HIKK+FD  YGNGWQCVVGSNFGC+FTHS G+FIYF+LETLNFLIFK  S
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS

A0A6J1EZZ1 Dynein light chain2.1e-3786.96Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS
        MLEGKATVK+TDMSEKMQ+HA ASASHALDLFDVSD LSLA+HIKK+FD +YG+GWQCVVGSNFGCFFTHSKG+FIYFSLETLNFLIFK+ S
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS

A0A6J1I806 Dynein light chain2.1e-3786.96Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS
        MLEGKATVK+TDMSEKMQ+HA ASASHALDLFDVSD LSLA+HIKK+FD +YG+GWQCVVGSNFGCFFTHSKG+FIYFSLETLNFLIFK+ S
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS

SwissProt top hitse value%identityAlignment
P61273 Dynein light chain 1, cytoplasmic7.1e-1443.33Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKS
        M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKK+FD  Y   W C+VG NFG + TH    FIYF L  +  L+FKS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKS

P61285 Dynein light chain 1, cytoplasmic7.1e-1443.33Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKS
        M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKK+FD  Y   W C+VG NFG + TH    FIYF L  +  L+FKS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKS

P63167 Dynein light chain 1, cytoplasmic7.1e-1443.33Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKS
        M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKK+FD  Y   W C+VG NFG + TH    FIYF L  +  L+FKS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKS

P63168 Dynein light chain 1, cytoplasmic7.1e-1443.33Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKS
        M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKK+FD  Y   W C+VG NFG + TH    FIYF L  +  L+FKS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKS

P63169 Dynein light chain 1, cytoplasmic7.1e-1443.33Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKS
        M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKK+FD  Y   W C+VG NFG + TH    FIYF L  +  L+FKS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKS

Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 111.6e-1669.49Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCV
        MLEGKA V+++DM  KMQM AMA AS ALDLFDV D  S+A HIKK+FD  YG+GWQCV
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCV

AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.9e-3375Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS
        MLEGKA V+++DM  KMQM AMA AS ALDLFDV D  S+A HIKK+FD  YG+GWQCVVGSNFGCFFTHSKG+FIYF LETL FLIFK  S
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS

AT3G16120.1 Dynein light chain type 1 family protein7.1e-3375.28Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFK
        MLEGKA V+ETDM  KMQM AM  AS +LDLFDV D +S+A+HIKK+FD  YG+GWQCVVG+NFGCFFTHSKG+FIYF L TLNFLIFK
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFK

AT4G27360.1 Dynein light chain type 1 family protein2.8e-2152.81Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFK
        MLEGKA + +TDM + M+  A++ AS ALD FDV++   +A  IKK+FD +YG+GWQC+VG++FG F TH  G FI+FS+ +L  L+FK
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFK

AT5G20110.1 Dynein light chain type 1 family protein1.3e-1346.84Show/hide
Query:  DMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKS
        DM   MQ HA   A   LD  +      +A ++KK+FD  YG  W C+VGS+FG F THS G FIYFS++ L  L+FK+
Subjt:  DMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGGGAAGGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATGCACGCCATGGCCTCTGCTTCTCACGCCCTCGATCTCTTCGACGTCTCCGATTT
CCTCTCCCTTGCTTCCCATATCAAGAAGGATTTTGATGGTACTTATGGAAATGGTTGGCAATGCGTGGTGGGTTCTAATTTCGGCTGCTTCTTCACTCATTCTAAGGGCA
GTTTCATTTATTTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAATCGCCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
GTCAGCTCGGAGGAGTCGCTGTAGAAATAGAGAAAGATAAGAGAGTTTTTGTTTGGTTTGCTTTACCCTTTTCGCCTATATAATTATAATATAATTCCGTCTCTATTTCC
ATTCCCATTCCGATTTGGCAGCCACCACAGATTTCCCATTCCCTTTTTAATTTCCCCACTTATATAATTAATAATAATAATAATAATAATAATAATCATCTTGAATCCGA
TTGAAAAGAAAGATGTTGGAAGGGAAGGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATGCACGCCATGGCCTCTGCTTCTCACGCCCTCGATCTCTTCGA
CGTCTCCGATTTCCTCTCCCTTGCTTCCCATATCAAGAAGGATTTTGATGGTACTTATGGAAATGGTTGGCAATGCGTGGTGGGTTCTAATTTCGGCTGCTTCTTCACTC
ATTCTAAGGGCAGTTTCATTTATTTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAATCGCCTTCCTAATTCATTTCTTTAGGGCTACTCTCCCCTCCCCCTCCCCCT
CCCCCTCATCTCTAAAATTTACATGGAACAACAAGCAACAACAAACCAACCGTACGTTGTGTATGTATTACTATTGTCACATGTGATCCATCTTTTAATTTCTCCTTCTG
CTATGTATGTTTTTTAATATTTCATTTTTCATCATATGAACATCTATATATCTTTTATTATTATTATTGCAA
Protein sequenceShow/hide protein sequence
MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASHIKKDFDGTYGNGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS