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PI0021918 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021918
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr04:21623847..21624293
RNA-Seq ExpressionPI0021918
SyntenyPI0021918
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157836.1 uncharacterized protein LOC111024449 [Momordica charantia]6.6e-5169.01Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI
        MP+Y KFLKDI+ +K+++ + ET+ LT+ +S+VFK+++  K+ DPGSFT+PCSIGG D+GRALCDL ASINLMPLSIFKKLE+G+A PT + LQ ADRSI
Subjt:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI

Query:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF
        TKPEG+IEDVLVKVDKF+FP DF+ILN EAD++VPIILG+ F
Subjt:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF

XP_022159235.1 uncharacterized protein LOC111025653 [Momordica charantia]8.7e-5167.61Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI
        MP+Y KF+KDI+ +K+++ + ET+ LT+ +S+VFK+++P K+ DPGSFT+PC IGG D+GRALCDLGASINLMPLSIFKK E+G+A PT + LQ ADRSI
Subjt:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI

Query:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF
        TKPEG+IEDVLVKVDKF+FP DF+IL+ EAD++VPIILG+ F
Subjt:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF

XP_030477929.1 uncharacterized protein LOC115694963 [Cannabis sativa]8.7e-5169.01Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI
        MP+YVKFLKDIL KKRR+ + ET+ LT+  S + K+++P K+ DPGSFT+PCSIGG D+GRALCDLGASINLMP+SIFKKL +GEA PT + LQ ADRS+
Subjt:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI

Query:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF
          PEG+IEDVLV+VDKF+FP DF+IL+YEAD++VPIILG+ F
Subjt:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF

XP_030478287.1 uncharacterized protein LOC115695357 [Cannabis sativa]8.7e-5169.01Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI
        MP+YVKFLKDIL KKRR+ + ET+ LT+  S + K+++P K+ DPGSFT+PCSIGG D+GRALCDLGASINLMP+SIFKKL +GEA PT + LQ ADRS+
Subjt:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI

Query:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF
          PEG+IEDVLV+VDKF+FP DF+IL+YEAD++VPIILG+ F
Subjt:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]8.7e-5169.01Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI
        MP+YVKFLKDIL KKRR+ + ET+ LT+  S + K+++P K+ DPGSFT+PCSIGG D+GRALCDLGASINLMP+SIFKKL +GEA PT + LQ ADRS+
Subjt:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI

Query:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF
          PEG+IEDVLV+VDKF+FP DF+IL+YEAD++VPIILG+ F
Subjt:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF

TrEMBL top hitse value%identityAlignment
A0A1S3BHX3 uncharacterized protein LOC1034900551.6e-5073.94Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI
        MPSY KFL DILAKKRR+ND +TM L Q TSD++KN V EKMT PGSF VPCSI GMDLG  LCDLGASINLMPLSIFKKL++ E  PT MR Q ADRSI
Subjt:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI

Query:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF
        T P+G+IEDVLVKVDKFLF  DF+IL+YEAD+EV IIL + F
Subjt:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF

A0A5D3BDT2 RT_RNaseH domain-containing protein1.6e-5073.94Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI
        MPSY KFL DILAKKRR+ND +TM L Q TSD++KN V EKMT PGSF VPCSI GMDLG  LCDLGASINLMPLSIFKKL++ E  PT MR Q ADRSI
Subjt:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI

Query:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF
        T P+G+IEDVLVKVDKFLF  DF+IL+YEAD+EV IIL + F
Subjt:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF

A0A6J1CPJ3 uncharacterized protein LOC1110129472.3e-4966.9Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI
        MP+Y KFLKDI+ +K+++ + ET+ LT+ +S+VFK++ P K+ DPGSFT+ C IGG D+GRALCDLGA INLMPLSIFKKLE+G+A PT + L  ADRSI
Subjt:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI

Query:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF
        TKPEG+IEDVLVKVDKF+FP DF+IL+ EAD++VPIILG+ F
Subjt:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF

A0A6J1DY39 uncharacterized protein LOC1110256534.2e-5167.61Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI
        MP+Y KF+KDI+ +K+++ + ET+ LT+ +S+VFK+++P K+ DPGSFT+PC IGG D+GRALCDLGASINLMPLSIFKK E+G+A PT + LQ ADRSI
Subjt:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI

Query:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF
        TKPEG+IEDVLVKVDKF+FP DF+IL+ EAD++VPIILG+ F
Subjt:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF

A0A6J1DZC3 uncharacterized protein LOC1110244493.2e-5169.01Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI
        MP+Y KFLKDI+ +K+++ + ET+ LT+ +S+VFK+++  K+ DPGSFT+PCSIGG D+GRALCDL ASINLMPLSIFKKLE+G+A PT + LQ ADRSI
Subjt:  MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSI

Query:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF
        TKPEG+IEDVLVKVDKF+FP DF+ILN EAD++VPIILG+ F
Subjt:  TKPEGRIEDVLVKVDKFLFPVDFVILNYEADQEVPIILGQSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCATATGTCAAATTTCTGAAAGATATTTTGGCAAAGAAGCGAAGGATGAATGACTGCGAAACAATGGTTCTAACGCAAGTAACGAGCGACGTTTTCAAGAATGA
GGTACCTGAGAAGATGACAGACCCTGGCAGCTTCACGGTACCATGCTCAATAGGCGGCATGGATCTAGGTCGCGCACTATGCGATTTGGGAGCCAGTATCAACCTGATGC
CCCTCTCCATCTTCAAGAAATTGGAGCTAGGGGAGGCGCATCCAACACTCATGAGGCTCCAATTTGCAGATAGATCCATCACCAAGCCTGAGGGGAGAATTGAAGACGTT
TTAGTCAAGGTGGATAAATTCTTGTTCCCCGTCGACTTTGTCATTCTGAATTACGAAGCGGATCAGGAGGTACCAATTATCTTGGGGCAGTCATTCTGTCAACTGGTCGC
GTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCATATGTCAAATTTCTGAAAGATATTTTGGCAAAGAAGCGAAGGATGAATGACTGCGAAACAATGGTTCTAACGCAAGTAACGAGCGACGTTTTCAAGAATGA
GGTACCTGAGAAGATGACAGACCCTGGCAGCTTCACGGTACCATGCTCAATAGGCGGCATGGATCTAGGTCGCGCACTATGCGATTTGGGAGCCAGTATCAACCTGATGC
CCCTCTCCATCTTCAAGAAATTGGAGCTAGGGGAGGCGCATCCAACACTCATGAGGCTCCAATTTGCAGATAGATCCATCACCAAGCCTGAGGGGAGAATTGAAGACGTT
TTAGTCAAGGTGGATAAATTCTTGTTCCCCGTCGACTTTGTCATTCTGAATTACGAAGCGGATCAGGAGGTACCAATTATCTTGGGGCAGTCATTCTGTCAACTGGTCGC
GTCCTAA
Protein sequenceShow/hide protein sequence
MPSYVKFLKDILAKKRRMNDCETMVLTQVTSDVFKNEVPEKMTDPGSFTVPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEAHPTLMRLQFADRSITKPEGRIEDV
LVKVDKFLFPVDFVILNYEADQEVPIILGQSFCQLVAS