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PI0021955 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021955
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr11:21108251..21108691
RNA-Seq ExpressionPI0021955
SyntenyPI0021955
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]1.7e-4673.65Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG R SSS N  PSPMSA QY MDLGFT VTRS++R S I I SPTESSTPPRPS NL+RPS  + QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV
        PTTYSQAV  +KRF+PRPEIK+YF+K +V+YDPIIEPEYQSLTL+E V
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]1.5e-4773.65Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RLSSS N APSPMSADQYAMDLGFT VTRS++R S I I  PTESSTPPRPSANL+RP  R+ QM+PPASP SN +SSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV
        PTTYSQAV P+KRF+PRP+IK YF+K +V+YDP IE EYQSLTL+E V
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]3.4e-4774.32Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+R  SS N APSP+SADQYAMDLGFTTVTR  +RS  I I SPTESSTPPRPS NL+RPS  + QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV
        PTTYSQAV P+KRF+PRPEIK+YF+K +V+YDPIIE EYQSLT +ETV
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]3.4e-4776.09Show/hide
Query:  RVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTPPTTYSQAVAP
        R +STSS+G+R SSS N APSPMSADQYAMDLGFTTVTRS+ARSS I+I SPT+SSTPPR SANL+RPS  + QMRP ASPLSN ESSTPPTTYSQ + P
Subjt:  RVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTPPTTYSQAVAP

Query:  EKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV
        +KRF+PR EIK+YF+K V++YD IIEPEYQSLTL+ETV
Subjt:  EKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]5.4e-4576.3Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+R SSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTPPRP ANL+RPS R+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPII
        PTTYSQAV P+KRF+PRP+IK+YF+K +V+YDPII
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPII

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.6e-4774.32Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+R  SS N APSP+SADQYAMDLGFTTVTR  +RS  I I SPTESSTPPRPS NL+RPS  + QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV
        PTTYSQAV P+KRF+PRPEIK+YF+K +V+YDPIIE EYQSLT +ETV
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV

A0A5A7UFZ9 Uncharacterized protein1.1e-4373.05Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+R SSS N APSPMS DQYAM LGFTT+T+SK+RSS IRI SPTES TPPRP ANL+RPS ++ QMR P SPLSN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQS
        PTTYSQAV P+KRF+PR EIK+YF+K  V+YDPIIEP YQ+
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQS

A0A5D3CKX1 Uncharacterized protein2.6e-4576.3Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+R SSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTPPRP ANL+RPS R+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPII
        PTTYSQAV P+KRF+PRP+IK+YF+K +V+YDPII
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPII

A0A5D3E4J4 Uncharacterized protein7.3e-4873.65Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RLSSS N APSPMSADQYAMDLGFT VTRS++R S I I  PTESSTPPRPSANL+RP  R+ QM+PPASP SN +SSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV
        PTTYSQAV P+KRF+PRP+IK YF+K +V+YDP IE EYQSLTL+E V
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV

E5GCE6 Uncharacterized protein8.1e-4773.65Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG R SSS N  PSPMSA QY MDLGFT VTRS++R S I I SPTESSTPPRPS NL+RPS  + QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV
        PTTYSQAV  +KRF+PRPEIK+YF+K +V+YDPIIEPEYQSLTL+E V
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGACATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGACAGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTAAAAAACAAGTAGTAATCTATGATCCTATCATAGAACCTGAATATCAGAGTCTCACTCTCGACGAGACAGTTTA
A
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGACATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGACAGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTAAAAAACAAGTAGTAATCTATGATCCTATCATAGAACCTGAATATCAGAGTCTCACTCTCGACGAGACAGTTTA
A
Protein sequenceShow/hide protein sequence
MSSVRGRGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSDIRIESPTESSTPPRPSANLVRPSDRITQMRPPASPLSNLESSTPPTTYSQAVAPEK
RFIPRPEIKTYFKKQVVIYDPIIEPEYQSLTLDETV