| GenBank top hits | e value | %identity | Alignment |
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| KAA0035681.1 reverse transcriptase [Cucumis melo var. makuwa] | 3.6e-39 | 60.9 | Show/hide |
Query: HDYKMKIDLPTYDEIVEEMMAARSKNTNRKNIWETNFSKKQSYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHL
H +++ + + E VEEMM R KN+NR+ WETN SKKQSY K +EQPSTS+ +KGK ++ QE KKKE+ +GK QNNY R SLGKCFRCG+ GHL
Subjt: HDYKMKIDLPTYDEIVEEMMAARSKNTNRKNIWETNFSKKQSYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHL
Query: SNTCPQRKTIALAEEE--YDSTSDNSKTVEEETELIEVDDGDKISCVIQRVLITLK
SN C QRKTIALAE+E Y S +D + EEETELIE DDGD+ISC++QRVLIT K
Subjt: SNTCPQRKTIALAEEE--YDSTSDNSKTVEEETELIEVDDGDKISCVIQRVLITLK
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| KAA0054243.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa] | 3.1e-83 | 83.51 | Show/hide |
Query: MEEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTYDEIVEEMMAARSKNTNRKNIWETNFSKKQSYNNKANEQPST
MEEY+AWQN QECDSSSGDE GN WN+NGD RMRQVYRG EARRE HHDYKMKI LPTY+E +EEMMAAR KN NRKNIWETN SKKQSY N AN+QPST
Subjt: MEEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTYDEIVEEMMAARSKNTNRKNIWETNFSKKQSYNNKANEQPST
Query: SIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEETELIEVDDGDKISCVIQ
SIAEKGKDVEA EA KKKENA KG+ NNYNR SLGKCFRCGQTGHLSNTCPQRKTIALA+EEYDS SD SKTVEEETELIE DDG++ISCVI+
Subjt: SIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEETELIEVDDGDKISCVIQ
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| KAA0057344.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa] | 2.2e-44 | 57.28 | Show/hide |
Query: MEEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTYDEIVE-EMMAARSKNT-NRKNIWETNFSKK----------Q
+E+ +AWQN QE DSSSGDE+GNIW+DNGD +MRQ YRG EARRE HHDYKMK+DLPTY+ + E R KNT N +T KK
Subjt: MEEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTYDEIVE-EMMAARSKNT-NRKNIWETNFSKK----------Q
Query: SYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEETELIEVDDGDK
+ K NEQPSTS AEKGKDVEAQ+AAKKKENAGKGK RKT+ALA+EEYD+ SD+SKT+EEETELIE DDGD
Subjt: SYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEETELIEVDDGDK
Query: ISCVIQRVLITLK
ISCVIQRVLI K
Subjt: ISCVIQRVLITLK
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| TYK11204.1 reverse transcriptase [Cucumis melo var. makuwa] | 3.0e-62 | 48.6 | Show/hide |
Query: MEEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTY-----------------------------------------
MEEYEAWQNGQECDSSS DEQGNIWNDN D +MRQVYRG EA+RE HHDYKMKIDLPTY
Subjt: MEEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTY-----------------------------------------
Query: -----DEI-------------------------------------------------------------------VEEMMAARSKNTNRKNIWETNFSKK
D++ VEEMMAAR +NTNRK WET+FSKK
Subjt: -----DEI-------------------------------------------------------------------VEEMMAARSKNTNRKNIWETNFSKK
Query: QSYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEETEL-------
QSY+NK NEQPSTS+AEK KDVEAQEA KKKENAGKGKVQNNYNR SLGKCFRC QT +LSNTCPQRKTIALAEEEYDS D+SKTVEEET+
Subjt: QSYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEETEL-------
Query: -IEVDDGDKISCVIQRVLITL
+ +D G + + + ++ TL
Subjt: -IEVDDGDKISCVIQRVLITL
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| TYK30863.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] | 5.3e-51 | 42.72 | Show/hide |
Query: EEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTYD-----------------------------------------
EEYE WQN Q+ DSS GDEQGNIWND+G+ RM Q YRGQEARRE +HDYKMKIDLPTY+
Subjt: EEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTYD-----------------------------------------
Query: ----------------------------------------------------------------------------------EIVEEMMAARSKNTNRKN
E VEEMM R KN+NR+
Subjt: ----------------------------------------------------------------------------------EIVEEMMAARSKNTNRKN
Query: IWETNFSKKQSYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEET
WETN SKKQSY K +EQPSTS+ +KGK ++ QE KKKE+ +GK QNNY R SLGKCFRCG+ GHLSN C QRKTIALAE+E S + EEET
Subjt: IWETNFSKKQSYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEET
Query: ELIEVDDGDKISCVIQRVLITLK
ELIE DDGD+ISC++QRVLIT K
Subjt: ELIEVDDGDKISCVIQRVLITLK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T256 Reverse transcriptase | 1.7e-39 | 60.9 | Show/hide |
Query: HDYKMKIDLPTYDEIVEEMMAARSKNTNRKNIWETNFSKKQSYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHL
H +++ + + E VEEMM R KN+NR+ WETN SKKQSY K +EQPSTS+ +KGK ++ QE KKKE+ +GK QNNY R SLGKCFRCG+ GHL
Subjt: HDYKMKIDLPTYDEIVEEMMAARSKNTNRKNIWETNFSKKQSYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHL
Query: SNTCPQRKTIALAEEE--YDSTSDNSKTVEEETELIEVDDGDKISCVIQRVLITLK
SN C QRKTIALAE+E Y S +D + EEETELIE DDGD+ISC++QRVLIT K
Subjt: SNTCPQRKTIALAEEE--YDSTSDNSKTVEEETELIEVDDGDKISCVIQRVLITLK
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| A0A5A7UE06 Zf-CCHC domain-containing protein | 1.5e-83 | 83.51 | Show/hide |
Query: MEEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTYDEIVEEMMAARSKNTNRKNIWETNFSKKQSYNNKANEQPST
MEEY+AWQN QECDSSSGDE GN WN+NGD RMRQVYRG EARRE HHDYKMKI LPTY+E +EEMMAAR KN NRKNIWETN SKKQSY N AN+QPST
Subjt: MEEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTYDEIVEEMMAARSKNTNRKNIWETNFSKKQSYNNKANEQPST
Query: SIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEETELIEVDDGDKISCVIQ
SIAEKGKDVEA EA KKKENA KG+ NNYNR SLGKCFRCGQTGHLSNTCPQRKTIALA+EEYDS SD SKTVEEETELIE DDG++ISCVI+
Subjt: SIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEETELIEVDDGDKISCVIQ
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| A0A5A7UQ86 RNA-directed DNA polymerase-like protein | 1.0e-44 | 57.28 | Show/hide |
Query: MEEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTYDEIVE-EMMAARSKNT-NRKNIWETNFSKK----------Q
+E+ +AWQN QE DSSSGDE+GNIW+DNGD +MRQ YRG EARRE HHDYKMK+DLPTY+ + E R KNT N +T KK
Subjt: MEEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTYDEIVE-EMMAARSKNT-NRKNIWETNFSKK----------Q
Query: SYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEETELIEVDDGDK
+ K NEQPSTS AEKGKDVEAQ+AAKKKENAGKGK RKT+ALA+EEYD+ SD+SKT+EEETELIE DDGD
Subjt: SYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEETELIEVDDGDK
Query: ISCVIQRVLITLK
ISCVIQRVLI K
Subjt: ISCVIQRVLITLK
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| A0A5D3CJ99 Reverse transcriptase | 1.4e-62 | 48.6 | Show/hide |
Query: MEEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTY-----------------------------------------
MEEYEAWQNGQECDSSS DEQGNIWNDN D +MRQVYRG EA+RE HHDYKMKIDLPTY
Subjt: MEEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTY-----------------------------------------
Query: -----DEI-------------------------------------------------------------------VEEMMAARSKNTNRKNIWETNFSKK
D++ VEEMMAAR +NTNRK WET+FSKK
Subjt: -----DEI-------------------------------------------------------------------VEEMMAARSKNTNRKNIWETNFSKK
Query: QSYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEETEL-------
QSY+NK NEQPSTS+AEK KDVEAQEA KKKENAGKGKVQNNYNR SLGKCFRC QT +LSNTCPQRKTIALAEEEYDS D+SKTVEEET+
Subjt: QSYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEETEL-------
Query: -IEVDDGDKISCVIQRVLITL
+ +D G + + + ++ TL
Subjt: -IEVDDGDKISCVIQRVLITL
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| A0A5D3E417 Transposon Ty3-I Gag-Pol polyprotein isoform X1 | 2.6e-51 | 42.72 | Show/hide |
Query: EEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTYD-----------------------------------------
EEYE WQN Q+ DSS GDEQGNIWND+G+ RM Q YRGQEARRE +HDYKMKIDLPTY+
Subjt: EEYEAWQNGQECDSSSGDEQGNIWNDNGDTRMRQVYRGQEARREFHHDYKMKIDLPTYD-----------------------------------------
Query: ----------------------------------------------------------------------------------EIVEEMMAARSKNTNRKN
E VEEMM R KN+NR+
Subjt: ----------------------------------------------------------------------------------EIVEEMMAARSKNTNRKN
Query: IWETNFSKKQSYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEET
WETN SKKQSY K +EQPSTS+ +KGK ++ QE KKKE+ +GK QNNY R SLGKCFRCG+ GHLSN C QRKTIALAE+E S + EEET
Subjt: IWETNFSKKQSYNNKANEQPSTSIAEKGKDVEAQEAAKKKENAGKGKVQNNYNRSSLGKCFRCGQTGHLSNTCPQRKTIALAEEEYDSTSDNSKTVEEET
Query: ELIEVDDGDKISCVIQRVLITLK
ELIE DDGD+ISC++QRVLIT K
Subjt: ELIEVDDGDKISCVIQRVLITLK
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