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PI0022018 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022018
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr06:17942928..17943426
RNA-Seq ExpressionPI0022018
SyntenyPI0022018
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054388.1 hypothetical protein E6C27_scaffold24G001310 [Cucumis melo var. makuwa]8.6e-3866Show/hide
Query:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFRKNEDIDR
        VL GI KIH D LTPLEEYLNSYLKRVD+FND++SSYSAQLL  DK  QLDEKT AI EALTLM   EK+                  R D +K E ID+
Subjt:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFRKNEDIDR

Query:  KKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL
        ++LEV KLQDE NTLE TP ITEE  EALATV KSM+ATREEFKNFKWKL
Subjt:  KKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL

KAA0054406.1 hypothetical protein E6C27_scaffold24G001560 [Cucumis melo var. makuwa]1.9e-3761.21Show/hide
Query:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRR-----GLHSYPWKRK--NWRADF-
        VL GI KIH D+LTPLEEYLNSYLKRVD+FND+QSSYSAQLL  DK  QLDEKTS IKEALTLMD      K+ +       L +   +R+  +   +F 
Subjt:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRR-----GLHSYPWKRK--NWRADF-

Query:  -------RKNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL
                K E ID++KLEVAKL DE NTLESTP ITEEA E LA VRKSM+   EEFKNFKWKL
Subjt:  -------RKNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL

KAA0060611.1 hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]1.9e-3759.39Show/hide
Query:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFR-------
        VL GI KIH D LT LEEYLNSYLKRVD+FND+QSS+S QLL MDK  QL+EKTSAIKEALTL+       K+ +  +     +RK      R       
Subjt:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFR-------

Query:  --------KNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL
                K E ID+++LEVAKL+DE NTLESTP ITEEA EALATVR+SM+A REEFKNFKW+L
Subjt:  --------KNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]1.9e-3760Show/hide
Query:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFR-------
        VL GI KIH D LT LEEYLNSYLKRVD+FND+QSSYSAQLL  DK  QL+EKTSAIKE LTL+       K+ +        +RK      R       
Subjt:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFR-------

Query:  --------KNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL
                K E ID+++LEVAKLQDE NTLESTP ITEEA EALATVR+SM+A REEFKNFKW+L
Subjt:  --------KNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]1.9e-3759.39Show/hide
Query:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFR-------
        VL GI KIH D LT LEEYLNSYLKRVD+FND+QSS+S QLL MDK  QL+EKTSAIKEALTL+       K+ +  +     +RK      R       
Subjt:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFR-------

Query:  --------KNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL
                K E ID+++LEVAKL+DE NTLESTP ITEEA EALATVR+SM+A REEFKNFKW+L
Subjt:  --------KNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL

TrEMBL top hitse value%identityAlignment
A0A5A7UJE9 Uncharacterized protein9.3e-3861.21Show/hide
Query:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRR-----GLHSYPWKRK--NWRADF-
        VL GI KIH D+LTPLEEYLNSYLKRVD+FND+QSSYSAQLL  DK  QLDEKTS IKEALTLMD      K+ +       L +   +R+  +   +F 
Subjt:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRR-----GLHSYPWKRK--NWRADF-

Query:  -------RKNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL
                K E ID++KLEVAKL DE NTLESTP ITEEA E LA VRKSM+   EEFKNFKWKL
Subjt:  -------RKNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL

A0A5A7V4F4 PMD domain-containing protein9.3e-3859.39Show/hide
Query:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFR-------
        VL GI KIH D LT LEEYLNSYLKRVD+FND+QSS+S QLL MDK  QL+EKTSAIKEALTL+       K+ +  +     +RK      R       
Subjt:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFR-------

Query:  --------KNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL
                K E ID+++LEVAKL+DE NTLESTP ITEEA EALATVR+SM+A REEFKNFKW+L
Subjt:  --------KNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL

A0A5A7VHW8 PMD domain-containing protein9.3e-3860Show/hide
Query:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFR-------
        VL GI KIH D LT LEEYLNSYLKRVD+FND+QSSYSAQLL  DK  QL+EKTSAIKE LTL+       K+ +        +RK      R       
Subjt:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFR-------

Query:  --------KNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL
                K E ID+++LEVAKLQDE NTLESTP ITEEA EALATVR+SM+A REEFKNFKW+L
Subjt:  --------KNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL

A0A5D3BCT1 Uncharacterized protein4.2e-3866Show/hide
Query:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFRKNEDIDR
        VL GI KIH D LTPLEEYLNSYLKRVD+FND++SSYSAQLL  DK  QLDEKT AI EALTLM   EK+                  R D +K E ID+
Subjt:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFRKNEDIDR

Query:  KKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL
        ++LEV KLQDE NTLE TP ITEE  EALATV KSM+ATREEFKNFKWKL
Subjt:  KKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL

A0A5D3BRA8 PMD domain-containing protein9.3e-3859.39Show/hide
Query:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFR-------
        VL GI KIH D LT LEEYLNSYLKRVD+FND+QSS+S QLL MDK  QL+EKTSAIKEALTL+       K+ +  +     +RK      R       
Subjt:  VLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFR-------

Query:  --------KNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL
                K E ID+++LEVAKL+DE NTLESTP ITEEA EALATVR+SM+A REEFKNFKW+L
Subjt:  --------KNEDIDRKKLEVAKLQDEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTTTTAGGAATTGCAAAGATCCATACAGATAACCTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTAAGAGGGTAGACAGCTTCAATGATATACAATCTTC
ATATTCTGCTCAGTTGTTGTTGATGGATAAAACTCATCAATTAGACGAGAAGACATCTGCCATCAAAGAAGCCTTGACTTTGATGGACAACTATGAAAAGATGCCAAAGT
TATTCAGGAGAGGGCTACACAGTTATCCTTGGAAAAGAAAGAATTGGAGAGCAGACTTCAGAAAAAATGAGGACATAGATAGAAAAAAACTAGAAGTTGCTAAGCTCCAA
GACGAAGCCAACACTCTTGAAAGCACCCCTACTATCACCGAAGAAGCCACCGAGGCCTTGGCTACGGTTCGTAAGAGTATGCAGGCCACACGCGAAGAATTCAAGAACTT
CAAGTGGAAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTTTTAGGAATTGCAAAGATCCATACAGATAACCTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTAAGAGGGTAGACAGCTTCAATGATATACAATCTTC
ATATTCTGCTCAGTTGTTGTTGATGGATAAAACTCATCAATTAGACGAGAAGACATCTGCCATCAAAGAAGCCTTGACTTTGATGGACAACTATGAAAAGATGCCAAAGT
TATTCAGGAGAGGGCTACACAGTTATCCTTGGAAAAGAAAGAATTGGAGAGCAGACTTCAGAAAAAATGAGGACATAGATAGAAAAAAACTAGAAGTTGCTAAGCTCCAA
GACGAAGCCAACACTCTTGAAAGCACCCCTACTATCACCGAAGAAGCCACCGAGGCCTTGGCTACGGTTCGTAAGAGTATGCAGGCCACACGCGAAGAATTCAAGAACTT
CAAGTGGAAACTTTGA
Protein sequenceShow/hide protein sequence
MVLLGIAKIHTDNLTPLEEYLNSYLKRVDSFNDIQSSYSAQLLLMDKTHQLDEKTSAIKEALTLMDNYEKMPKLFRRGLHSYPWKRKNWRADFRKNEDIDRKKLEVAKLQ
DEANTLESTPTITEEATEALATVRKSMQATREEFKNFKWKL