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PI0022028 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022028
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr05:16929123..16929818
RNA-Seq ExpressionPI0022028
SyntenyPI0022028
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059690.1 Retrotransposon gag protein [Cucumis melo var. makuwa]5.6e-0452.46Show/hide
Query:  KKKEEKKQMLADLSEQVEELPAKYKAL-EVERDDLEVIAEELEDELGAMSPVDQGTLPKKQ
        +KKE+KK++LA +SEQVE+LPAK KA+ E E + L+V+AEEL++EL A+SP+++ + P+ +
Subjt:  KKKEEKKQMLADLSEQVEELPAKYKAL-EVERDDLEVIAEELEDELGAMSPVDQGTLPKKQ
TrEMBL top hitse value%identityAlignment
A0A5D3DR17 Retrotransposon gag protein2.7e-0452.46Show/hide
Query:  KKKEEKKQMLADLSEQVEELPAKYKAL-EVERDDLEVIAEELEDELGAMSPVDQGTLPKKQ
        +KKE+KK++LA +SEQVE+LPAK KA+ E E + L+V+AEEL++EL A+SP+++ + P+ +
Subjt:  KKKEEKKQMLADLSEQVEELPAKYKAL-EVERDDLEVIAEELEDELGAMSPVDQGTLPKKQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGTCATCTAGCCCGCATAATGATAACATCCAAGTACGCTCCGACAGACTTGAGTCGGAGCAATCTCAATCGTGGAGCAGTAGTGAGCAAGACACGCCTAGTTA
CCCCCACCTAAAGCATGGAAAAGGGAAGGTGTTACTAGTACCAACACCGGAAAGAGATGAGCTCTGCGATGAGCTAGAAGTTGATATAGAGGATAAGGTTGTCGTTTACA
CGTTCATCGTTGAACGAAAGAGGAGGCAAAGAGAAGCACAGGCGAAAAGGGCAAGGGAGGAACGTCGAAAGAAGGAAGAGCGTGAGCAAAAAAGATTCGAGGAACGTCAT
AAGGCGGGGAGTAGACCCTTGGAAATACGTTCACTACCTAACAAAGTTGCCGTGATACAGAAGATCACGGATAAGCTCTCCAAAGTTTCCTTCGCCAAGACGCAGAAGAC
AATAGAGGCGTTCAAATCGACCTTAAAAAAGAAGGAAGAGAAGAAGCAAATGCTCGCGGACCTAAGCGAGCAAGTGGAGGAACTTCCTGCGAAGTACAAGGCCCTGGAAG
TAGAGAGGGACGACCTCGAGGTTATTGCTGAAGAACTCGAGGATGAGCTGGGGGCGATGAGCCCAGTTGATCAAGGGACACTGCCTAAGAAACAAAGGGAGGTCGCCAGA
CTATCTAGAGGAAAAAAGAGAGCTGGGGAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGTCATCTAGCCCGCATAATGATAACATCCAAGTACGCTCCGACAGACTTGAGTCGGAGCAATCTCAATCGTGGAGCAGTAGTGAGCAAGACACGCCTAGTTA
CCCCCACCTAAAGCATGGAAAAGGGAAGGTGTTACTAGTACCAACACCGGAAAGAGATGAGCTCTGCGATGAGCTAGAAGTTGATATAGAGGATAAGGTTGTCGTTTACA
CGTTCATCGTTGAACGAAAGAGGAGGCAAAGAGAAGCACAGGCGAAAAGGGCAAGGGAGGAACGTCGAAAGAAGGAAGAGCGTGAGCAAAAAAGATTCGAGGAACGTCAT
AAGGCGGGGAGTAGACCCTTGGAAATACGTTCACTACCTAACAAAGTTGCCGTGATACAGAAGATCACGGATAAGCTCTCCAAAGTTTCCTTCGCCAAGACGCAGAAGAC
AATAGAGGCGTTCAAATCGACCTTAAAAAAGAAGGAAGAGAAGAAGCAAATGCTCGCGGACCTAAGCGAGCAAGTGGAGGAACTTCCTGCGAAGTACAAGGCCCTGGAAG
TAGAGAGGGACGACCTCGAGGTTATTGCTGAAGAACTCGAGGATGAGCTGGGGGCGATGAGCCCAGTTGATCAAGGGACACTGCCTAAGAAACAAAGGGAGGTCGCCAGA
CTATCTAGAGGAAAAAAGAGAGCTGGGGAATTTTGA
Protein sequenceShow/hide protein sequence
MAESSSPHNDNIQVRSDRLESEQSQSWSSSEQDTPSYPHLKHGKGKVLLVPTPERDELCDELEVDIEDKVVVYTFIVERKRRQREAQAKRAREERRKKEEREQKRFEERH
KAGSRPLEIRSLPNKVAVIQKITDKLSKVSFAKTQKTIEAFKSTLKKKEEKKQMLADLSEQVEELPAKYKALEVERDDLEVIAEELEDELGAMSPVDQGTLPKKQREVAR
LSRGKKRAGEF