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PI0022030 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022030
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:20559796..20560628
RNA-Seq ExpressionPI0022030
SyntenyPI0022030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-3065Show/hide
Query:  FGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIMEI
        FGWNDE KCI+AEKE+FDNWVKSH  AKGLLNKSFPHYD+L YVFGKD AT  R E+F D+  N P GYE F+ D   D +   +YSQGL+M PD++M I
Subjt:  FGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIMEI
KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-3063.64Show/hide
Query:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIM
        GFGWNDE KCI+AEKE+FD+WV+SH AAKGLLNKSFPHYD+L YVF KD+AT  R E+F DV SN P GY+ F+ + A+D +   +YS+GL+M PD++M
Subjt:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIM
KAA0050782.1 retrotransposon protein [Cucumis melo var. makuwa]7.7e-3267Show/hide
Query:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIME
        GFGWNDE KCIIAEKE+FD+WVKSH AAKGLLNKSF HYD+L YVFGKD AT  R E+F D+ SN P GY+ F+ D   D + P +YS GL+M PDD+ME
Subjt:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIME
KAA0063726.1 retrotransposon protein [Cucumis melo var. makuwa]2.9e-3167.68Show/hide
Query:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIM
        GFGWNDE KCI+AEKE+FD+WVKSH AAKGLLNKSF HYD+L YVFGKD AT  RVE+F +V SN P  Y+ F+TD   D + P +YSQGL+M PDD+M
Subjt:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIM
TYK15304.1 retrotransposon protein [Cucumis melo var. makuwa]8.5e-3164.65Show/hide
Query:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIM
        GFGWNDE KCI+ EKE+FD+WVKSH  AKGLLNKSFPHYD+ +YVFGKD AT  R ++F DV SN P GY+ F  D   D + P +YSQGL+M PDD+M
Subjt:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIM
TrEMBL top hitse value%identityAlignment
A0A5A7SXX8 Retrotransposon protein7.1e-3165Show/hide
Query:  FGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIMEI
        FGWNDE KCI+AEKE+FDNWVKSH  AKGLLNKSFPHYD+L YVFGKD AT  R E+F D+  N P GYE F+ D   D +   +YSQGL+M PD++M I
Subjt:  FGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIMEI
A0A5A7TZA5 Retrotransposon protein7.1e-3163.64Show/hide
Query:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIM
        GFGWNDE KCI+AEKE+FD+WV+SH AAKGLLNKSFPHYD+L YVF KD+AT  R E+F DV SN P GY+ F+ + A+D +   +YS+GL+M PD++M
Subjt:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIM
A0A5A7U4M2 Retrotransposon protein3.7e-3267Show/hide
Query:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIME
        GFGWNDE KCIIAEKE+FD+WVKSH AAKGLLNKSF HYD+L YVFGKD AT  R E+F D+ SN P GY+ F+ D   D + P +YS GL+M PDD+ME
Subjt:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIME
A0A5A7VBC5 Retrotransposon protein1.4e-3167.68Show/hide
Query:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIM
        GFGWNDE KCI+AEKE+FD+WVKSH AAKGLLNKSF HYD+L YVFGKD AT  RVE+F +V SN P  Y+ F+TD   D + P +YSQGL+M PDD+M
Subjt:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIM
A0A5D3CWJ7 Retrotransposon protein4.1e-3164.65Show/hide
Query:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIM
        GFGWNDE KCI+ EKE+FD+WVKSH  AKGLLNKSFPHYD+ +YVFGKD AT  R ++F DV SN P GY+ F  D   D + P +YSQGL+M PDD+M
Subjt:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIPMIYSQGLDMLPDDIM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.2 unknown protein2.5e-0428.57Show/hide
Query:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKD
        GF W+     +IA+ ++++ ++++H  A+    K+ P Y +L ++FGK+
Subjt:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKD
AT4G02210.1 unknown protein1.5e-0422.89Show/hide
Query:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEI
        GF W++E + + A+  ++ +++K+H  A+  + +  P+Y DL  + G     E      +D W +    ++ F +    D  I
Subjt:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEI
AT4G02210.2 unknown protein1.5e-0422.89Show/hide
Query:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEI
        GF W++E + + A+  ++ +++K+H  A+  + +  P+Y DL  + G     E      +D W +    ++ F +    D  I
Subjt:  GFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCGCGTTGGGATCGAACTCACGACCTTGAGGCCAGATGCGTGGCTCTCTGCAAGTGTGACGCGTGGCGCTCTTGGGTTTGGATGGAACGATGAATTCAAGTGCAT
CATTGCTGAGAAGGAATTGTTTGACAATTGGGTGAAGAGTCATTCTGCCGCTAAGGGCCTCCTCAACAAATCTTTCCCACATTACGATGACTTGATCTACGTATTTGGGA
AAGATTATGCTACTGAAACACGCGTAGAGACATTCGTCGATGTGTGGTCAAATATGCCAGGAGGGTACGAGGGATTTTCTACTGACGATGCTAACGATCCAGAGATCCCT
ATGATTTATAGTCAGGGACTAGACATGTTGCCTGATGACATCATGGAGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCGCGTTGGGATCGAACTCACGACCTTGAGGCCAGATGCGTGGCTCTCTGCAAGTGTGACGCGTGGCGCTCTTGGGTTTGGATGGAACGATGAATTCAAGTGCAT
CATTGCTGAGAAGGAATTGTTTGACAATTGGGTGAAGAGTCATTCTGCCGCTAAGGGCCTCCTCAACAAATCTTTCCCACATTACGATGACTTGATCTACGTATTTGGGA
AAGATTATGCTACTGAAACACGCGTAGAGACATTCGTCGATGTGTGGTCAAATATGCCAGGAGGGTACGAGGGATTTTCTACTGACGATGCTAACGATCCAGAGATCCCT
ATGATTTATAGTCAGGGACTAGACATGTTGCCTGATGACATCATGGAGATATGA
Protein sequenceShow/hide protein sequence
MSRVGIELTTLRPDAWLSASVTRGALGFGWNDEFKCIIAEKELFDNWVKSHSAAKGLLNKSFPHYDDLIYVFGKDYATETRVETFVDVWSNMPGGYEGFSTDDANDPEIP
MIYSQGLDMLPDDIMEI