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PI0022049 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022049
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCotton fiber protein
Genome locationchr06:30197380..30197730
RNA-Seq ExpressionPI0022049
SyntenyPI0022049
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052985.1 hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa]8.7e-1452.46Show/hide
Query:  MALRLEKTLNKLKAFFRLCRLLRRRSVH--------RTPNRNVLKDDQT-------TRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQIS
        MA RL+K L KL A  RLC + RRRS          R     ++ +DQ+        R LE  SSSRY     +E+DVD +AEIFIENFRRQL LERQIS
Subjt:  MALRLEKTLNKLKAFFRLCRLLRRRSVH--------RTPNRNVLKDDQT-------TRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQIS

Query:  LQLRLYGVNNSFETECEEILPP
        LQLR Y V NS+ETE E+I PP
Subjt:  LQLRLYGVNNSFETECEEILPP

KAE8650012.1 hypothetical protein Csa_009473 [Cucumis sativus]8.3e-4185.84Show/hide
Query:  MALRLEKTLNKLKAFFRLCRLLRRRSVHRTPNRNVLKDDQTTRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGV-NNSFET
        MALRLE+TLNKLKAF RLC LLRRRS++RT  RNVL+DDQT RNLE DSSSRYESCEEFEDDVDH+AEIFIENFRRQL LERQISLQLRLYGV NNSFET
Subjt:  MALRLEKTLNKLKAFFRLCRLLRRRSVHRTPNRNVLKDDQTTRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGV-NNSFET

Query:  ECEEILPPPPPSP
        + EEILPPPPP P
Subjt:  ECEEILPPPPPSP

KAG7015798.1 hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-1149.59Show/hide
Query:  MALRLEKTLNKLKAFFRLCRLLR---RR-----SVHRTPN-RNVLKDDQ-----TTRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISL
        + LR++K L KL AF RLC + R   RR     S  RT   R++L D+      + R LE   SSR  SC   EDDVD +A+IFI+NFRRQL LERQISL
Subjt:  MALRLEKTLNKLKAFFRLCRLLR---RR-----SVHRTPN-RNVLKDDQ-----TTRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISL

Query:  QLRLYGVNNSFETECEEILPP
        +LR YG+N+S E + E   PP
Subjt:  QLRLYGVNNSFETECEEILPP

XP_011652707.1 uncharacterized protein LOC105435054 [Cucumis sativus]7.3e-1352.46Show/hide
Query:  MALRLEKTLNKLKAFFRLCRLLRRRS----------VHRTPNRNVLKDDQT------TRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQI
        MA RL+K L KLKA  RLC L R+RS            +   R VL+D          R LE  SSSRY     +E+DVD +AEIFIENFRRQL LERQI
Subjt:  MALRLEKTLNKLKAFFRLCRLLRRRS----------VHRTPNRNVLKDDQT------TRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQI

Query:  SLQLRLYGVNNSFETECEEILP
        SLQLR Y V NS+ETE E+  P
Subjt:  SLQLRLYGVNNSFETECEEILP

XP_031739290.1 uncharacterized protein LOC116402928 [Cucumis sativus]8.3e-4185.84Show/hide
Query:  MALRLEKTLNKLKAFFRLCRLLRRRSVHRTPNRNVLKDDQTTRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGV-NNSFET
        MALRLE+TLNKLKAF RLC LLRRRS++RT  RNVL+DDQT RNLE DSSSRYESCEEFEDDVDH+AEIFIENFRRQL LERQISLQLRLYGV NNSFET
Subjt:  MALRLEKTLNKLKAFFRLCRLLRRRSVHRTPNRNVLKDDQTTRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGV-NNSFET

Query:  ECEEILPPPPPSP
        + EEILPPPPP P
Subjt:  ECEEILPPPPPSP

TrEMBL top hitse value%identityAlignment
A0A0A0L4Z8 Uncharacterized protein3.6e-1352.46Show/hide
Query:  MALRLEKTLNKLKAFFRLCRLLRRRS----------VHRTPNRNVLKDDQT------TRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQI
        MA RL+K L KLKA  RLC L R+RS            +   R VL+D          R LE  SSSRY     +E+DVD +AEIFIENFRRQL LERQI
Subjt:  MALRLEKTLNKLKAFFRLCRLLRRRS----------VHRTPNRNVLKDDQT------TRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQI

Query:  SLQLRLYGVNNSFETECEEILP
        SLQLR Y V NS+ETE E+  P
Subjt:  SLQLRLYGVNNSFETECEEILP

A0A0A0L6A3 Uncharacterized protein4.0e-4185.84Show/hide
Query:  MALRLEKTLNKLKAFFRLCRLLRRRSVHRTPNRNVLKDDQTTRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGV-NNSFET
        MALRLE+TLNKLKAF RLC LLRRRS++RT  RNVL+DDQT RNLE DSSSRYESCEEFEDDVDH+AEIFIENFRRQL LERQISLQLRLYGV NNSFET
Subjt:  MALRLEKTLNKLKAFFRLCRLLRRRSVHRTPNRNVLKDDQTTRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGV-NNSFET

Query:  ECEEILPPPPPSP
        + EEILPPPPP P
Subjt:  ECEEILPPPPPSP

A0A5D3CHZ5 Uncharacterized protein4.2e-1452.46Show/hide
Query:  MALRLEKTLNKLKAFFRLCRLLRRRSVH--------RTPNRNVLKDDQT-------TRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQIS
        MA RL+K L KL A  RLC + RRRS          R     ++ +DQ+        R LE  SSSRY     +E+DVD +AEIFIENFRRQL LERQIS
Subjt:  MALRLEKTLNKLKAFFRLCRLLRRRSVH--------RTPNRNVLKDDQT-------TRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQIS

Query:  LQLRLYGVNNSFETECEEILPP
        LQLR Y V NS+ETE E+I PP
Subjt:  LQLRLYGVNNSFETECEEILPP

A0A6J1CW64 uncharacterized protein LOC1110147801.2e-0844.8Show/hide
Query:  RLEKTLNKLKAFFRL---CRLLRRRSVHRTPN----------RNVLKDDQ-----TTRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQIS
        RL+K + K+ A  RL     L RRR   R  +          R+ L+D++     + R LE  SS RY +    EDDVD +++IFI+NF R+L LERQIS
Subjt:  RLEKTLNKLKAFFRL---CRLLRRRSVHRTPN----------RNVLKDDQ-----TTRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQIS

Query:  LQLRLYGVNNSFETECEEILPPPPP
        LQLR Y +N+S  TE EE  PPPPP
Subjt:  LQLRLYGVNNSFETECEEILPPPPP

A0A7I8JS04 Hypothetical protein9.4e-0659.26Show/hide
Query:  DDVDHQAEIFIENFRRQLSLERQISLQLRLYGVNNSFETECEEILPPPPPSPLP
        DDVD + E FI  FRR L +ERQISL+LR Y ++NSFE +   + PPPPP PLP
Subjt:  DDVDHQAEIFIENFRRQLSLERQISLQLRLYGVNNSFETECEEILPPPPPSPLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57510.1 unknown protein6.0e-0556.41Show/hide
Query:  EDDVDHQAEIFIENFRRQLSLERQISLQLR-LYGVNNSF
        ++D+D++AE+FI NF RQL +ERQISL+L+   G N SF
Subjt:  EDDVDHQAEIFIENFRRQLSLERQISLQLR-LYGVNNSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTTCGCCTCGAGAAGACATTAAACAAACTCAAAGCATTTTTCCGTCTCTGCCGTCTTCTCCGACGACGCTCCGTCCATCGGACACCAAATCGAAATGTCTTGAA
AGACGATCAAACCACGAGAAACCTTGAATGTGATTCGAGTTCTAGGTATGAGAGCTGTGAAGAATTTGAAGACGATGTGGATCACCAAGCGGAGATCTTCATCGAGAATT
TTCGTCGTCAATTGAGTTTAGAAAGACAAATTTCTTTGCAATTGAGGTTGTATGGAGTTAATAATAGCTTTGAAACAGAGTGTGAAGAAATATTGCCGCCGCCACCACCA
TCGCCACTGCCAATTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTTCGCCTCGAGAAGACATTAAACAAACTCAAAGCATTTTTCCGTCTCTGCCGTCTTCTCCGACGACGCTCCGTCCATCGGACACCAAATCGAAATGTCTTGAA
AGACGATCAAACCACGAGAAACCTTGAATGTGATTCGAGTTCTAGGTATGAGAGCTGTGAAGAATTTGAAGACGATGTGGATCACCAAGCGGAGATCTTCATCGAGAATT
TTCGTCGTCAATTGAGTTTAGAAAGACAAATTTCTTTGCAATTGAGGTTGTATGGAGTTAATAATAGCTTTGAAACAGAGTGTGAAGAAATATTGCCGCCGCCACCACCA
TCGCCACTGCCAATTGAATGA
Protein sequenceShow/hide protein sequence
MALRLEKTLNKLKAFFRLCRLLRRRSVHRTPNRNVLKDDQTTRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGVNNSFETECEEILPPPPP
SPLPIE