; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022056 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022056
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr09:10418516..10419597
RNA-Seq ExpressionPI0022056
SyntenyPI0022056
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7822570.1 reverse transcriptase [Senna tora]3.5e-0637.62Show/hide
Query:  SFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLGCDDSW
        S+ W S L GRE+L+  LC R+G+G S  F  DPW+     FK++ S S   +   +KV DFI     WD+  L S+++ EE+  V  + L   GC D  
Subjt:  SFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLGCDDSW

Query:  I
        +
Subjt:  I

PKA49974.1 Putative ribonuclease H protein [Apostasia shenzhenica]2.7e-0633.02Show/hide
Query:  SSSTYSFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLG
        +S   S+ W S LWGR+LL   L  RIG+G S     DPW+ RP +F+   SP+   +L   ++V+ +T    W+   ++S+L + +  L+  M      
Subjt:  SSSTYSFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLG

Query:  CDDSWI
         DD+ I
Subjt:  CDDSWI

XP_017250619.1 PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]5.4e-0737Show/hide
Query:  SFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLGCDDSW
        S  W S +WG+ LL+  L RRIG+GQST   +DPW+ RP     +F P  R S + VKVV++IT    W+   +     + ++ L+  + L      DSW
Subjt:  SFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLGCDDSW

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]1.2e-0936.63Show/hide
Query:  SFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLGCDDSW
        S+FW  F+WGR+LL+  L  R+G+G +     DPWI RP++F+   +P        VKV D I    QWD+  +S +   E+  L+  M +      DSW
Subjt:  SFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLGCDDSW

Query:  I
        I
Subjt:  I

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]8.9e-1039.25Show/hide
Query:  SSSTYSFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFK-LTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDL
        ++S  S+FW  FLWGR+LLV  L  R+G+G +     DPW+ RP  FK L F+  A   LD   V  FIT    WD+ S+S     E+  L+  M +   
Subjt:  SSSTYSFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFK-LTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDL

Query:  GCDDSWI
           DSW+
Subjt:  GCDDSWI

TrEMBL top hitse value%identityAlignment
A0A2I0A354 Ribonuclease H protein1.3e-0633.02Show/hide
Query:  SSSTYSFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLG
        +S   S+ W S LWGR+LL   L  RIG+G S     DPW+ RP +F+   SP+   +L   ++V+ +T    W+   ++S+L + +  L+  M      
Subjt:  SSSTYSFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLG

Query:  CDDSWI
         DD+ I
Subjt:  CDDSWI

A0A6J1BRN0 uncharacterized protein LOC1110047875.6e-1036.63Show/hide
Query:  SFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLGCDDSW
        S+FW  F+WGR+LL+  L  R+G+G +     DPWI RP++F+   +P        VKV D I    QWD+  +S +   E+  L+  M +      DSW
Subjt:  SFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLGCDDSW

Query:  I
        I
Subjt:  I

A0A6J1DX30 uncharacterized protein LOC1110248744.3e-1039.25Show/hide
Query:  SSSTYSFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFK-LTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDL
        ++S  S+FW  FLWGR+LLV  L  R+G+G +     DPW+ RP  FK L F+  A   LD   V  FIT    WD+ S+S     E+  L+  M +   
Subjt:  SSSTYSFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFK-LTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDL

Query:  GCDDSWI
           DSW+
Subjt:  GCDDSWI

M5VP36 Uncharacterized protein (Fragment)1.3e-0647.37Show/hide
Query:  SFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQW--DLLSL
        S+ W S +WG ELL++ L +RIGDGQ TL   D WI RP++F+L    S +V     KV DFI     W  DLL+L
Subjt:  SFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQW--DLLSL

M5XJH9 Uncharacterized protein (Fragment)5.8e-0736.63Show/hide
Query:  SFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLGCDDSW
        S+FW S +WG ELL++ L +RIGDGQ TL   D WI RP++F+     S +V     KV DFI     W++  L+     E++  +  + L      D W
Subjt:  SFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLGCDDSW

Query:  I
        +
Subjt:  I

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTTCGTCCACTTATTCGTTCTTTTGGCACAGTTTTCTTTGGGGAAGGGAACTTCTTGTAGCGGAACTCTGTCGTCGTATTGGGGATGGTCAGTCGACCCTATT
TTTAAGGGACCCTTGGATTCTACGACCCCATGCTTTTAAACTGACATTTTCCCCTTCTGCAAGGGTTAGTCTGGACGTTGTGAAGGTGGTTGACTTCATTACTCGACAGT
GCCAATGGGATTTGCTTAGTCTTTCGTCTTTACTTACTACCGAGGAGTTGGCATTGGTGGAGATTATGTCGTTGAGGGATCTGGGATGTGATGATTCATGGATCACTATG
ATTCGCGGGGAGCTTTTAGTGTGCGTAGTGGGTATCAGCTTGCTATGTCTCAGAGGTGTTTGGAGAGTTGTTCGAAGGTGTCGCAATCGAAGACCTAGTGGCATCACTTA
TGGAAAGCTTTCCTACCTTCCAAAATTAAGGACAGGCTTTCGGAGTCCTAAGGGTTGTGTGGGGCAGGTTGGAGTGCCTTTGTTCGCTCAAGTGGTCCACTCGCAGTTGT
GTTTTCAAGTTCTTATTGATGTTGCTTGTTCTTTCGTAAATCGGGTCTCTAGAGTAGGTGTTGTGATATTGAACAGATCGAACACGCTTGTTTATGCTTTCATGAAGCGA
ATCCCAGTGGGTTACTCGCCTTTGATCGCTGAAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTTCGTCCACTTATTCGTTCTTTTGGCACAGTTTTCTTTGGGGAAGGGAACTTCTTGTAGCGGAACTCTGTCGTCGTATTGGGGATGGTCAGTCGACCCTATT
TTTAAGGGACCCTTGGATTCTACGACCCCATGCTTTTAAACTGACATTTTCCCCTTCTGCAAGGGTTAGTCTGGACGTTGTGAAGGTGGTTGACTTCATTACTCGACAGT
GCCAATGGGATTTGCTTAGTCTTTCGTCTTTACTTACTACCGAGGAGTTGGCATTGGTGGAGATTATGTCGTTGAGGGATCTGGGATGTGATGATTCATGGATCACTATG
ATTCGCGGGGAGCTTTTAGTGTGCGTAGTGGGTATCAGCTTGCTATGTCTCAGAGGTGTTTGGAGAGTTGTTCGAAGGTGTCGCAATCGAAGACCTAGTGGCATCACTTA
TGGAAAGCTTTCCTACCTTCCAAAATTAAGGACAGGCTTTCGGAGTCCTAAGGGTTGTGTGGGGCAGGTTGGAGTGCCTTTGTTCGCTCAAGTGGTCCACTCGCAGTTGT
GTTTTCAAGTTCTTATTGATGTTGCTTGTTCTTTCGTAAATCGGGTCTCTAGAGTAGGTGTTGTGATATTGAACAGATCGAACACGCTTGTTTATGCTTTCATGAAGCGA
ATCCCAGTGGGTTACTCGCCTTTGATCGCTGAAACTTAG
Protein sequenceShow/hide protein sequence
MVSSSTYSFFWHSFLWGRELLVAELCRRIGDGQSTLFLRDPWILRPHAFKLTFSPSARVSLDVVKVVDFITRQCQWDLLSLSSLLTTEELALVEIMSLRDLGCDDSWITM
IRGELLVCVVGISLLCLRGVWRVVRRCRNRRPSGITYGKLSYLPKLRTGFRSPKGCVGQVGVPLFAQVVHSQLCFQVLIDVACSFVNRVSRVGVVILNRSNTLVYAFMKR
IPVGYSPLIAET