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PI0022057 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022057
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionIntegrase, catalytic core
Genome locationchr07:7212226..7217871
RNA-Seq ExpressionPI0022057
SyntenyPI0022057
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051398.1 Integrase, catalytic core [Cucumis melo var. makuwa]2.2e-1150Show/hide
Query:  SSSSSSSNAQFHHSPFKILGSNCDFGRCIPCPSSTNSRVVKEESKDEDSVFN----------EFCIEEVKVQKGEVEDIDSFGAEFANLFLSPEKK
        S+SSS S++  H SPFKI G NCDF R +  PSST S  V E S+DEDSV +          + C EE +   GE +DIDSFG EFAN    PE+K
Subjt:  SSSSSSSNAQFHHSPFKILGSNCDFGRCIPCPSSTNSRVVKEESKDEDSVFN----------EFCIEEVKVQKGEVEDIDSFGAEFANLFLSPEKK
TrEMBL top hitse value%identityAlignment
A0A5A7U808 Integrase, catalytic core1.0e-1150Show/hide
Query:  SSSSSSSNAQFHHSPFKILGSNCDFGRCIPCPSSTNSRVVKEESKDEDSVFN----------EFCIEEVKVQKGEVEDIDSFGAEFANLFLSPEKK
        S+SSS S++  H SPFKI G NCDF R +  PSST S  V E S+DEDSV +          + C EE +   GE +DIDSFG EFAN    PE+K
Subjt:  SSSSSSSNAQFHHSPFKILGSNCDFGRCIPCPSSTNSRVVKEESKDEDSVFN----------EFCIEEVKVQKGEVEDIDSFGAEFANLFLSPEKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGATTAGTTTGAAAAATCCTTGTTTTGATTGTTCCCCTCAACCAGAGAACGTCATCAGTATAAAAAAAAGTACCCCAACCAACAAATCTTTTCCAACATCAATCAA
GAAAAACCCCCAATGGTTCAAGGCCTTCCCAAAATTCTTTAGAAAAGGATGCACATTCTTTCGCAATGCTTGGCCAACCTTGGCAAATTCAGATATTTTGGAAGAAAGTT
GCGTGAAGATTCTGTCAGGTAGTTCATCCTCTTCCTCTTCAAATGCTCAATTTCATCATTCTCCCTTCAAAATCCTAGGCTCAAATTGTGATTTTGGGAGATGTATCCCA
TGTCCATCCTCAACAAATTCAAGGGTAGTAAAGGAAGAGTCCAAGGATGAAGACTCAGTGTTCAATGAGTTTTGTATAGAGGAAGTAAAGGTGCAAAAGGGAGAGGTAGA
GGACATAGATTCCTTTGGAGCTGAGTTTGCTAATTTATTTCTTTCACCAGAAAAAAAAAAAAAGAATCTGCCAAGGCAAAGGCTAACATCATTCCCCTCCATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGATTAGTTTGAAAAATCCTTGTTTTGATTGTTCCCCTCAACCAGAGAACGTCATCAGTATAAAAAAAAGTACCCCAACCAACAAATCTTTTCCAACATCAATCAA
GAAAAACCCCCAATGGTTCAAGGCCTTCCCAAAATTCTTTAGAAAAGGATGCACATTCTTTCGCAATGCTTGGCCAACCTTGGCAAATTCAGATATTTTGGAAGAAAGTT
GCGTGAAGATTCTGTCAGGTAGTTCATCCTCTTCCTCTTCAAATGCTCAATTTCATCATTCTCCCTTCAAAATCCTAGGCTCAAATTGTGATTTTGGGAGATGTATCCCA
TGTCCATCCTCAACAAATTCAAGGGTAGTAAAGGAAGAGTCCAAGGATGAAGACTCAGTGTTCAATGAGTTTTGTATAGAGGAAGTAAAGGTGCAAAAGGGAGAGGTAGA
GGACATAGATTCCTTTGGAGCTGAGTTTGCTAATTTATTTCTTTCACCAGAAAAAAAAAAAAAGAATCTGCCAAGGCAAAGGCTAACATCATTCCCCTCCATCTAG
Protein sequenceShow/hide protein sequence
MLISLKNPCFDCSPQPENVISIKKSTPTNKSFPTSIKKNPQWFKAFPKFFRKGCTFFRNAWPTLANSDILEESCVKILSGSSSSSSSNAQFHHSPFKILGSNCDFGRCIP
CPSSTNSRVVKEESKDEDSVFNEFCIEEVKVQKGEVEDIDSFGAEFANLFLSPEKKKKNLPRQRLTSFPSI