; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022078 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022078
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptiondynamin-related protein 1E
Genome locationchr08:22754142..22755110
RNA-Seq ExpressionPI0022078
SyntenyPI0022078
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsIPR000375 - Dynamin stalk domain
IPR022812 - Dynamin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9463032.1 hypothetical protein C3L33_05058, partial [Rhododendron williamsianum]8.6e-3655.62Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS  LESVIR+ IPSITSL NKSI+ELESEM HLGR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES
         R    +N R+I+ E DGYQ HLIAPEQGYRRLIEG+LNYFRGPAEASVDAELKRFP+LQAEIAAA+ E LE FRE+S
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES

KAG5565317.1 hypothetical protein RHGRI_001271 [Rhododendron griersonianum]8.6e-3655.62Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS  LESVIR+ IPSITSL NKSI+ELESEM HLGR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES
         R    +N R+I+ E DGYQ HLIAPEQGYRRLIEG+LNYFRGPAEASVDAELKRFP+LQAEIAAA+ E LE FRE+S
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES

PON56747.1 Dynamin superfamily [Parasponia andersonii]4.6e-3757.3Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS  LE+VIRA IPSITSL NKSI+ELESE++HLGR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES
         R    +N RK+V E DGYQ HLIAPEQGYRRLIE SLNYFRGPAEASVDAELKRFPTLQAEIAAASNE LE FRE+S
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES

PON87557.1 Dynamin superfamily [Trema orientale]2.1e-3756.18Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGRS------------------------------------------------------
        MGSEYLAKLLS  LESVIRA IPSITSL NKSI+ELESE++HLGR                                                       
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGRS------------------------------------------------------

Query:  KQQFGRRNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES
         +   ++N RK+V E DGYQ HLIAPEQGYRRLIE SLNYFRGPAEASVDAELKRFPTLQAEIAAASNE LE FRE+S
Subjt:  KQQFGRRNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES

XP_038902386.1 dynamin-related protein 1E [Benincasa hispida]1.1e-3554.87Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS  LESVIRA IPSITSL NKSI+ELESEM+HLGR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         R    +N RKIV E DGYQ HLIAPEQGYRRLIEGSLNYFRGPAEASVDA                 ELKRFPTLQAEIAAASNE LE FREES
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES

TrEMBL top hitse value%identityAlignment
A0A0A0L982 Uncharacterized protein5.4e-3654.87Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS  LESVIRA IPSITSL NKSI+ELESEM+HLGR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         R    +N RKIV E DGYQ HLIAPEQGYRRLIEGSLNYFRGPAEASVDA                 ELKRFPTLQAEIAAASNE LE FREES
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES

A0A2P5C6U2 Dynamin superfamily2.2e-3757.3Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS  LE+VIRA IPSITSL NKSI+ELESE++HLGR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES
         R    +N RK+V E DGYQ HLIAPEQGYRRLIE SLNYFRGPAEASVDAELKRFPTLQAEIAAASNE LE FRE+S
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES

A0A2P5EPT6 Dynamin superfamily9.9e-3856.18Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGRS------------------------------------------------------
        MGSEYLAKLLS  LESVIRA IPSITSL NKSI+ELESE++HLGR                                                       
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGRS------------------------------------------------------

Query:  KQQFGRRNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES
         +   ++N RK+V E DGYQ HLIAPEQGYRRLIE SLNYFRGPAEASVDAELKRFPTLQAEIAAASNE LE FRE+S
Subjt:  KQQFGRRNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES

A0A6A4M0W6 Dynamin-type G domain-containing protein (Fragment)4.2e-3655.62Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS  LESVIR+ IPSITSL NKSI+ELESEM HLGR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES
         R    +N R+I+ E DGYQ HLIAPEQGYRRLIEG+LNYFRGPAEASVDAELKRFP+LQAEIAAA+ E LE FRE+S
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIAAASNEGLEIFREES

A0A6J1IER6 dynamin-related protein 1E-like1.2e-3554.36Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS  LESVIRA IPSITSL NKSI+ELESEM+HLGR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         R    +N RKIV E DGYQ HLIAPEQGYRRLIEGSLNYFRGPAEASVDA                 ELKRFPTLQAEIAAASNE LE FR+ES
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES

SwissProt top hitse value%identityAlignment
Q39821 Dynamin-related protein 12A1.5e-2237.44Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGRS------------------------------------------------------
        MGSE+LAK+LS  LE+VI++ IP I SL NK+I ELE+E+  LG+                                                       
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGRS------------------------------------------------------

Query:  KQQFGRRNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         +Q    N RK++ E DGYQ HLIAPEQGYRRLIE SL   RGPAE++VDA                 +LK++P L+ E+ AAS + LE  R+ES
Subjt:  KQQFGRRNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES

Q39828 Dynamin-related protein 5A1.5e-2237.44Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGRS------------------------------------------------------
        MGSE+LAK+LS  LE+VI++ IP I SL NK+I ELE+E+  LG+                                                       
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGRS------------------------------------------------------

Query:  KQQFGRRNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         +Q    N RK++ E DGYQ HLIAPEQGYRRLIE SL   RGPAEA+VDA                 +LK++P L+ E+ AA+ + LE  R+ES
Subjt:  KQQFGRRNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES

Q8LF21 Phragmoplastin DRP1C9.6e-3043.59Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS  LE+VIR  IPSI +L NKSI+E+ +E++ +GR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         R    +N +K+V E DGYQ HLIAPEQGYRRLI+GS++YF+GPAEA+VDA                 ELKRFPTL ++IAAA+NE LE FR+ES
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES

Q8S3C9 Phragmoplastin DRP1D2.1e-2945.13Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS LLESVIR+ IPSI SL N +I ELE E++ LGR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         R    ++ ++IV E+DGYQ HLIAPE GYRRLIEGSLN+FRGPAEASV+A                 ELKRFP+LQ E+ AA+N  L+ FREES
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES

Q9FNX5 Phragmoplastin DRP1E3.0e-3147.18Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS  LESVIR  IPSI SL NKSI ELE E++ +GR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         R    ++ +KIV E DGYQ HLIAPEQGYRRLIEG+L YFRGPAEASVDA                 ELKRFP+LQ E+AAA+N  LE FREES
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES

Arabidopsis top hitse value%identityAlignment
AT1G14830.1 DYNAMIN-like 1C6.8e-3143.59Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS  LE+VIR  IPSI +L NKSI+E+ +E++ +GR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         R    +N +K+V E DGYQ HLIAPEQGYRRLI+GS++YF+GPAEA+VDA                 ELKRFPTL ++IAAA+NE LE FR+ES
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES

AT2G44590.1 DYNAMIN-like 1D1.5e-3045.13Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS LLESVIR+ IPSI SL N +I ELE E++ LGR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         R    ++ ++IV E+DGYQ HLIAPE GYRRLIEGSLN+FRGPAEASV+A                 ELKRFP+LQ E+ AA+N  L+ FREES
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES

AT2G44590.2 DYNAMIN-like 1D1.5e-3045.13Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS LLESVIR+ IPSI SL N +I ELE E++ LGR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         R    ++ ++IV E+DGYQ HLIAPE GYRRLIEGSLN+FRGPAEASV+A                 ELKRFP+LQ E+ AA+N  L+ FREES
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES

AT2G44590.3 DYNAMIN-like 1D1.5e-3045.13Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS LLESVIR+ IPSI SL N +I ELE E++ LGR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         R    ++ ++IV E+DGYQ HLIAPE GYRRLIEGSLN+FRGPAEASV+A                 ELKRFP+LQ E+ AA+N  L+ FREES
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES

AT3G60190.1 DYNAMIN-like 1E2.1e-3247.18Show/hide
Query:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF
        MGSEYLAKLLS  LESVIR  IPSI SL NKSI ELE E++ +GR                                                   K  F
Subjt:  MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGR--------------------------------------------------SKQQF

Query:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES
         R    ++ +KIV E DGYQ HLIAPEQGYRRLIEG+L YFRGPAEASVDA                 ELKRFP+LQ E+AAA+N  LE FREES
Subjt:  GR----RNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDA-----------------ELKRFPTLQAEIAAASNEGLEIFREES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCGGAGTATCTTGCTAAGCTCTTATCAAATCTTTTGGAGTCCGTGATTAGAGCTGGAATACCCAGTATCACCTCTTTGACTAACAAAAGCATCAATGAACTTGA
GTCTGAGATGAATCATCTCGGCAGATCTAAGCAGCAATTTGGAAGGAGGAATGCAAGGAAAATTGTTTTAGAGACAGATGGTTATCAATCTCACCTGATCGCCCCAGAGC
AAGGTTATCGACGTCTTATTGAGGGGTCCCTAAATTATTTCAGGGGACCTGCTGAAGCTTCTGTGGATGCTGAATTAAAGCGTTTTCCAACATTACAAGCTGAGATAGCT
GCCGCTTCAAATGAGGGCCTGGAAATATTTCGTGAAGAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCGGAGTATCTTGCTAAGCTCTTATCAAATCTTTTGGAGTCCGTGATTAGAGCTGGAATACCCAGTATCACCTCTTTGACTAACAAAAGCATCAATGAACTTGA
GTCTGAGATGAATCATCTCGGCAGATCTAAGCAGCAATTTGGAAGGAGGAATGCAAGGAAAATTGTTTTAGAGACAGATGGTTATCAATCTCACCTGATCGCCCCAGAGC
AAGGTTATCGACGTCTTATTGAGGGGTCCCTAAATTATTTCAGGGGACCTGCTGAAGCTTCTGTGGATGCTGAATTAAAGCGTTTTCCAACATTACAAGCTGAGATAGCT
GCCGCTTCAAATGAGGGCCTGGAAATATTTCGTGAAGAGAGTTAA
Protein sequenceShow/hide protein sequence
MGSEYLAKLLSNLLESVIRAGIPSITSLTNKSINELESEMNHLGRSKQQFGRRNARKIVLETDGYQSHLIAPEQGYRRLIEGSLNYFRGPAEASVDAELKRFPTLQAEIA
AASNEGLEIFREES