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PI0022079 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022079
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionpolyadenylation factor subunit 2-like
Genome locationchr11:4267259..4267510
RNA-Seq ExpressionPI0022079
SyntenyPI0022079
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575060.1 hypothetical protein SDJN03_25699, partial [Cucurbita argyrosperma subsp. sororia]9.9e-1267.12Show/hide
Query:  KKKSGMSKILGMGAGL----VGGLLLGELVADTG-AAPSFDLFSDPTGGG-GMDYDASMQSMSDNMDLLGTIG
        KKK G SK+LG+GAGL    VGGLLLG+  AD G AAPSF+LFSD TGGG     DA MQS SD++DLLGTIG
Subjt:  KKKSGMSKILGMGAGL----VGGLLLGELVADTG-AAPSFDLFSDPTGGG-GMDYDASMQSMSDNMDLLGTIG

XP_022959345.1 protein SRC2-like [Cucurbita moschata]5.8e-1267.12Show/hide
Query:  KKKSGMSKILGMGAGL----VGGLLLGELVADTG-AAPSFDLFSDPTGGG-GMDYDASMQSMSDNMDLLGTIG
        KKK GMSK+LG+GAGL    VGGLLLG+  AD G AAPSF+ FSD TGGG     DA MQS SD++DLLGTIG
Subjt:  KKKSGMSKILGMGAGL----VGGLLLGELVADTG-AAPSFDLFSDPTGGG-GMDYDASMQSMSDNMDLLGTIG

XP_023006250.1 polyadenylation factor subunit 2-like [Cucurbita maxima]5.8e-1267.12Show/hide
Query:  KKKSGMSKILGMGAGL----VGGLLLGELVADTG-AAPSFDLFSDPTGGG-GMDYDASMQSMSDNMDLLGTIG
        KKK G SK+LG+GAGL    VGGLLLG+  AD G AAPSF+LFSD TGGG     DA MQS+SD++DLLGTIG
Subjt:  KKKSGMSKILGMGAGL----VGGLLLGELVADTG-AAPSFDLFSDPTGGG-GMDYDASMQSMSDNMDLLGTIG

XP_023548312.1 formin-like protein 20 [Cucurbita pepo subsp. pepo]2.9e-1166.67Show/hide
Query:  KKKSGMSKILGMGAGL----VGGLLLGELVADTG-AAPSFDLFSDPTGGG-GMDYDASMQSMSDNMDLLGTI
        KKK G SK+LG+GAGL    VGGLLLG+  AD G AAPSF+LFSD TGGG     DA MQS+SD++DLLGTI
Subjt:  KKKSGMSKILGMGAGL----VGGLLLGELVADTG-AAPSFDLFSDPTGGG-GMDYDASMQSMSDNMDLLGTI

XP_038875072.1 formin-like protein 20 [Benincasa hispida]1.1e-2391.3Show/hide
Query:  KKKKSGMSKILGMGAGLVGGLLLGELVADTGA-APSFDLFSDPTGGGGMDYDASMQSMSDNMDLLGTIG
        KKKKSGMSKILGMGAGLVGGLLLGEL AD GA  PSFDLFSDPTGGGG+DYDASMQSMSD+MDLLGTIG
Subjt:  KKKKSGMSKILGMGAGLVGGLLLGELVADTGA-APSFDLFSDPTGGGGMDYDASMQSMSDNMDLLGTIG

TrEMBL top hitse value%identityAlignment
A0A6J1H610 protein SRC2-like2.8e-1267.12Show/hide
Query:  KKKSGMSKILGMGAGL----VGGLLLGELVADTG-AAPSFDLFSDPTGGG-GMDYDASMQSMSDNMDLLGTIG
        KKK GMSK+LG+GAGL    VGGLLLG+  AD G AAPSF+ FSD TGGG     DA MQS SD++DLLGTIG
Subjt:  KKKSGMSKILGMGAGL----VGGLLLGELVADTG-AAPSFDLFSDPTGGG-GMDYDASMQSMSDNMDLLGTIG

A0A6J1KZM6 polyadenylation factor subunit 2-like2.8e-1267.12Show/hide
Query:  KKKSGMSKILGMGAGL----VGGLLLGELVADTG-AAPSFDLFSDPTGGG-GMDYDASMQSMSDNMDLLGTIG
        KKK G SK+LG+GAGL    VGGLLLG+  AD G AAPSF+LFSD TGGG     DA MQS+SD++DLLGTIG
Subjt:  KKKSGMSKILGMGAGL----VGGLLLGELVADTG-AAPSFDLFSDPTGGG-GMDYDASMQSMSDNMDLLGTIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCGCCGCCAGGATACCGGCCAGCTTCGAATGCTTCTGAGGAAGAAAAAGAAGTCGGGGATGAGTAAAATTCTTGGAATGGGAGCAGGGTTGGTCGGAGGGCTTTT
GCTTGGGGAATTGGTGGCGGACACTGGGGCGGCACCGTCGTTTGATTTATTTTCCGATCCCACGGGCGGCGGAGGAATGGATTACGATGCAAGCATGCAATCTATGTCTG
ATAATATGGATTTGCTTGGTACCATTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCGCCGCCAGGATACCGGCCAGCTTCGAATGCTTCTGAGGAAGAAAAAGAAGTCGGGGATGAGTAAAATTCTTGGAATGGGAGCAGGGTTGGTCGGAGGGCTTTT
GCTTGGGGAATTGGTGGCGGACACTGGGGCGGCACCGTCGTTTGATTTATTTTCCGATCCCACGGGCGGCGGAGGAATGGATTACGATGCAAGCATGCAATCTATGTCTG
ATAATATGGATTTGCTTGGTACCATTGGGTGA
Protein sequenceShow/hide protein sequence
MLRRQDTGQLRMLLRKKKKSGMSKILGMGAGLVGGLLLGELVADTGAAPSFDLFSDPTGGGGMDYDASMQSMSDNMDLLGTIG