| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039984.1 RNA polymerase sigma factor sigB isoform X1 [Cucumis melo var. makuwa] | 1.1e-290 | 97.63 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLN+DRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANN NSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
D+EPTSEELELLQDELSES+TV+SKRQTERKARRTRAAEKTVTSVV FKSGSSSRKKR+SLQEVDYSDPLRYLRATTS SRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMG
MLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMG
Subjt: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMG
|
|
| XP_004154029.1 RNA polymerase sigma factor sigB [Cucumis sativus] | 3.4e-308 | 97.24 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTL++DRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEA+IAAAAAEAVTLAKAAVKVARDAALLANN NSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
DMEPTSEELELLQDELSES+TV+SKRQTERKARRTRAAEKTVTSV+SFKSGSSSRKKRNS+QEVDYSDPLRYLRATT+ SRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQL ENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAET ED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
MLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| XP_008460092.1 PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Cucumis melo] | 9.8e-308 | 97.41 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSF+PTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLN+DRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANN NSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
D+EPTS+ELELLQDELSES+TV+SKRQTERKARRTRAAEKTVTSVV FKSGSSSRKKR+SLQEVDYSDPLRYLRATTS SRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
MLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| XP_008460093.1 PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Cucumis melo] | 1.6e-294 | 94.48 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSF+PTAYSSYT SPPTSTGTATTLN+DRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANN NSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
D+EPTS+ELELLQDELSES+TV+SKRQTERKARRTRAAEKTVTSVV FKSGSSSRKKR+SLQEVDYSDPLRYLRATTS SRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
MLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| XP_038875580.1 RNA polymerase sigma factor sigB isoform X1 [Benincasa hispida] | 2.8e-302 | 96.04 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYS-HHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVE
MSCLLPQFKCHPETFSIQFKTAANY+ HHH+FLPTA SSYTKVRDPHSLRTQCILSAASPPTSTGTATTLN+DRL LPPFDTNTDSVSVERLRSYLGAVE
Subjt: MSCLLPQFKCHPETFSIQFKTAANYS-HHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVE
Query: SSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTES
SSLASTLLTSEEATIAAAAAEAV LAKAAVKVARDAALLANNSNSSRAG KS+SSP+PDALHFKWAQFMESERADIIGEPVGVN RPME DAL+PSTT+S
Subjt: SSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTES
Query: DDMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLL
DDMEPTSEELELLQDELSES+TVRSKRQTERKARRTRAAEKT TSVVS KSGSSSRKKRNSLQEVDYSDPLRYLRATTS SRLLTA EELELSEGIQDLL
Subjt: DDMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLL
Query: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
KLERLQEELA+RYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Subjt: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Query: WWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAE
WWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAE
Subjt: WWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAE
Query: DMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
DMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL+S
Subjt: DMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K917 RNA polymerase sigma factor | 1.6e-308 | 97.24 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTL++DRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEA+IAAAAAEAVTLAKAAVKVARDAALLANN NSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
DMEPTSEELELLQDELSES+TV+SKRQTERKARRTRAAEKTVTSV+SFKSGSSSRKKRNS+QEVDYSDPLRYLRATT+ SRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQL ENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAET ED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
MLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| A0A1S3CBA5 RNA polymerase sigma factor | 7.9e-295 | 94.48 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSF+PTAYSSYT SPPTSTGTATTLN+DRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANN NSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
D+EPTS+ELELLQDELSES+TV+SKRQTERKARRTRAAEKTVTSVV FKSGSSSRKKR+SLQEVDYSDPLRYLRATTS SRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
MLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| A0A1S3CD00 RNA polymerase sigma factor | 4.8e-308 | 97.41 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSF+PTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLN+DRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANN NSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
D+EPTS+ELELLQDELSES+TV+SKRQTERKARRTRAAEKTVTSVV FKSGSSSRKKR+SLQEVDYSDPLRYLRATTS SRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
MLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| A0A5A7T955 RNA polymerase sigma factor | 5.3e-291 | 97.63 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLN+DRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANN NSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
D+EPTSEELELLQDELSES+TV+SKRQTERKARRTRAAEKTVTSVV FKSGSSSRKKR+SLQEVDYSDPLRYLRATTS SRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMG
MLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMG
Subjt: MLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMG
|
|
| A0A6J1DSR7 RNA polymerase sigma factor | 6.9e-283 | 89.95 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFK-------TAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRS
MSCLLPQFKCHPETFSIQFK T ANYSHHH+FLPTA SS TKVRDPHSLRTQCILSAASP TSTGTATT N++RLKLPP D NTDS+S ERLRS
Subjt: MSCLLPQFKCHPETFSIQFK-------TAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALE
YL AVESS ASTLLTSEEATIAAAAAEAVTLAKAAVKVA+DAALL NNSNSS+ G KSQSS K DALHFKW QFMESERADIIG PVGVN RP EGDAL+
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALE
Query: PSTTESDDMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSE
T ESD +PT+EELELLQDELS ++ VRS+RQTER+A+RTRAAEK TSVVS KSGSSSRKKRNS+QEVDYSDPLRYLRATTS SRLLTATEELELSE
Subjt: PSTTESDDMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSE
Query: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Query: FSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
FSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt: FSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Query: EAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
EAET+ED+LIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: EAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O22056 RNA polymerase sigma factor sigB | 9.9e-186 | 63.51 | Show/hide |
Query: SCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGA----
SCLLPQFKC P++FSI F+T SF ++ + P QC +S SP T + L++ +L+LP FDT++DS+ +R +Y
Subjt: SCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGA----
Query: -----VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDAL
+E+ + TLLTS+EA + AAAAEAV LA+AAVKVA+DA L NSN++ T S + + KW QF E ERA I+G + V+ + D +
Subjt: -----VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDAL
Query: EPSTTESD---DME-PTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEE
S + + D+E EE+ELL+++ S S+ VRS RQTERKARR + EKT + + S K+GSS +KKR QEVD++DPLRYLR TTS+S+LLT EE
Subjt: EPSTTESD---DME-PTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEE
Query: LELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R+++GTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
Subjt: LELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
Query: SKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSE
+KGFKFSTYAHWWIKQAVRK LSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP ++EIAEA GLSMKRL AVL++PK PRSL+QKIG+NQNLKPSE
Subjt: SKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSE
Query: VISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
VI+DPEA T+ED+LIK+FM+QDL+KVLDSL RE+QVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR HLQQYL++
Subjt: VISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| P26683 RNA polymerase sigma factor SigA | 2.2e-76 | 46.08 | Show/hide |
Query: KSGSSSRKKRNSLQEVDY--SDPLRYLRATTSASRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKM
KSG +++ +R + + + D +R RLL A EE+EL+ I DLL+LER++E L+E+ +P ++WA A + R RL+ G KDKM
Subjt: KSGSSSRKKRNSLQEVDY--SDPLRYLRATTSASRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKM
Query: IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPD
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ + ++DQSRTIRLP H+ E R+K+ K L E GR P
Subjt: IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPD
Query: DKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEI
++EIA +++++L + + + P SLE IG ++ + + I + + ET ED + K +++DLEKVLDSL+PRER V+R R+G++DGRMKTL+EIG+I
Subjt: DKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEI
Query: MGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
V+RERIRQIE+ A RKL++ R L++Y+
Subjt: MGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
|
|
| P38023 RNA polymerase sigma factor SigA1 | 9.6e-72 | 41.45 | Show/hide |
Query: SEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSF-------------KSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELS
++ ELL L + T ++KR + +KA T A + T++ + ++ K + +++ D +R RLL A EE+EL+
Subjt: SEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSF-------------KSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELS
Query: EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
I DLL LER+++EL E+ P+ A+WAAA R+RL G KDKM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+
Subjt: EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
Query: KFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISD
KFSTYA WWI+QA+ + ++DQSRTIRLP H+ E R+K+ K L E GR P ++EIA +++++L + + + P SLE IG ++ + + I +
Subjt: KFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISD
Query: PEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
+ ET ED + K +++DLE VL +L+PRER V+R R+G++DGRMKTL+EIG++ V+RERIRQIE+ A RKL++ R L++Y+
Subjt: PEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
|
|
| P52322 RNA polymerase sigma factor SigA | 6.6e-65 | 37.65 | Show/hide |
Query: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
D + E++EL +E S+S + R+ RR A +K T D +R RLL A EE+EL+ I DLLK
Subjt: DMEPTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLK
Query: LERLQEE----------------------LAERYGNEPTFA-----------------QWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNY
LER++E+ + E+ EP + +W A + ++RL +G K+KM++SN+RLV+SIAK Y
Subjt: LERLQEE----------------------LAERYGNEPTFA-----------------QWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNY
Query: QGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRL
G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ + ++DQSRTIRLP H+ E R+K+ K L E R P ++EIA +++++L
Subjt: QGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRL
Query: AAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
+ + + P SLE IG ++ + + I + + ET ED + K +++DLE VLD+L+PRER V+R R+G++DGRMKTL+EIG+I V+RERIRQIE+ A
Subjt: AAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
Query: FRKLKNKKRTKHLQQYL
RKL++ R L++Y+
Subjt: FRKLKNKKRTKHLQQYL
|
|
| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 1.3e-63 | 39.33 | Show/hide |
Query: VRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQW
VRSKRQ ER+A+ RA + + +S KK+ Q D D L+ +LLTA EE EL IQ LLKLE+++ +L + G EPT +W
Subjt: VRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQW
Query: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
A A G++ L+ ++ G ++K+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WWI+Q++RK + SRTIRLP
Subjt: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
Query: HMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPR
++ +V EARK E P +E+A G+S ++L +L + P S++Q I +Q+ E+ D ET + KQ M+ + +L+ L+P+
Subjt: HMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPR
Query: ERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
ER++I+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A +LK + L Y
Subjt: ERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08540.1 RNApolymerase sigma subunit 2 | 7.0e-187 | 63.51 | Show/hide |
Query: SCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGA----
SCLLPQFKC P++FSI F+T SF ++ + P QC +S SP T + L++ +L+LP FDT++DS+ +R +Y
Subjt: SCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNMDRLKLPPFDTNTDSVSVERLRSYLGA----
Query: -----VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDAL
+E+ + TLLTS+EA + AAAAEAV LA+AAVKVA+DA L NSN++ T S + + KW QF E ERA I+G + V+ + D +
Subjt: -----VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNSNSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDAL
Query: EPSTTESD---DME-PTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEE
S + + D+E EE+ELL+++ S S+ VRS RQTERKARR + EKT + + S K+GSS +KKR QEVD++DPLRYLR TTS+S+LLT EE
Subjt: EPSTTESD---DME-PTSEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEE
Query: LELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R+++GTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
Subjt: LELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
Query: SKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSE
+KGFKFSTYAHWWIKQAVRK LSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP ++EIAEA GLSMKRL AVL++PK PRSL+QKIG+NQNLKPSE
Subjt: SKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSE
Query: VISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
VI+DPEA T+ED+LIK+FM+QDL+KVLDSL RE+QVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR HLQQYL++
Subjt: VISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| AT1G64860.1 sigma factor A | 6.6e-36 | 30.58 | Show/hide |
Query: LEPSTTESDDMEPTSEELELLQDE--------LSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRN-----SLQEVDYSDPLR-YLRATT
LE + DD+ S E LL + LS V S+ + R+ + T + + + + ++KK N ++ +V +R Y++
Subjt: LEPSTTESDDMEPTSEELELLQDE--------LSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRN-----SLQEVDYSDPLR-YLRATT
Query: SASRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
S +L+ E + LS+ I+ L+L+ + L +R G EP+ Q A + +++ L+ L L ++K+ SN+RLV+SIA+ Y G + DLVQ G
Subjt: SASRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
Query: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQK
GL+RG EKFD+SKGF+ STY +WWI+Q V + L D SRT+RLP H+ E ++ A+ +L E G P IAE+ +S K++ SL++
Subjt: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQK
Query: IGINQNLKPSEV----ISDPEAET-----AEDMLIKQFMKQDLEKVLD-SLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKN
+ N P E I+D E +D+ +K+++ K++ +L RE+++IR +G+ D T ++I + +G+SRER+RQ+ A KLK+
Subjt: IGINQNLKPSEV----ISDPEAET-----AEDMLIKQFMKQDLEKVLD-SLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKN
Query: KKRTKHLQQYLM
R + ++ ++
Subjt: KKRTKHLQQYLM
|
|
| AT2G36990.1 RNApolymerase sigma-subunit F | 8.9e-65 | 39.33 | Show/hide |
Query: VRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQW
VRSKRQ ER+A+ RA + + +S KK+ Q D D L+ +LLTA EE EL IQ LLKLE+++ +L + G EPT +W
Subjt: VRSKRQTERKARRTRAAEKTVTSVVSFKSGSSSRKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQW
Query: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
A A G++ L+ ++ G ++K+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WWI+Q++RK + SRTIRLP
Subjt: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
Query: HMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPR
++ +V EARK E P +E+A G+S ++L +L + P S++Q I +Q+ E+ D ET + KQ M+ + +L+ L+P+
Subjt: HMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPR
Query: ERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
ER++I+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A +LK + L Y
Subjt: ERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
|
|
| AT3G53920.1 RNApolymerase sigma-subunit C | 4.1e-54 | 33.16 | Show/hide |
Query: SEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSS------RKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLL
S+ EL+ ++ V V S+R+ ++KARR S V+ ++G S R N++ P +Y + SR E E+S G++ +
Subjt: SEELELLQDELSESVTVRSKRQTERKARRTRAAEKTVTSVVSFKSGSSS------RKKRNSLQEVDYSDPLRYLRATTSASRLLTATEELELSEGIQDLL
Query: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
+ER++ +L E G + + WAAAAG+N++ L + L+YG C+D+++KS LV+ +A+NY+G G+ +DL+Q G G+++GAE+FD ++G+KFSTY
Subjt: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Query: WWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG-RHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETA
+WI++++ +S +R + +P ++ +++ARK L + +G ++ D+EIA+ G S+K++ A K S+++K+G K E D E+
Subjt: WWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG-RHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETA
Query: EDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
E+ +++Q ++D+ +L+ L PRE+QV+ R+G++D R K+L+EIG+++ VS+E IR+IE A KL+++ + L+ YL
Subjt: EDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
|
|
| AT5G13730.1 sigma factor 4 | 5.4e-46 | 35.97 | Show/hide |
Query: SASRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
S S L+ EE++L +++ KLE L + E NE A+ G +R+ + L ++K+ + RLV+SIA YQG G+NLQDL+QEG
Subjt: SASRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
Query: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQK
GL+RGAE+FD +G+K STY +WWIKQA+ + ++ +SR ++LP M E T +V EA L + R P +EIAE L++ + + ++P SL++
Subjt: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQK
Query: IGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
N + E++ P+ E+M+ ++ MK ++E++L SL RE +V+ FG+ + +EIG+ + +SRER+RQI A +KL+N L+ Y
Subjt: IGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
Query: LMS
S
Subjt: LMS
|
|
