; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022090 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022090
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:27728580..27730681
RNA-Seq ExpressionPI0022090
SyntenyPI0022090
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33754.1 retrotransposon protein [Cucumis melo subsp. melo]1.0e-6840.14Show/hide
Query:  MIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHFNLVLLSVLRLHDELLVKPQPVTNT
        MIHE+DLVC QSTRMDRR F ILCHLLR VAGL STE++DVEEMVAMFLHVLAHDVKNRVIQ+EF RS ETVSRHFN+VLL+VLRL++EL+ +P PVT+ 
Subjt:  MIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHFNLVLLSVLRLHDELLVKPQPVTNT

Query:  CTDTRWRWFE---------------------TEQTR--------------------------------------------------------------AS
        C D RW+ FE                     T +TR                                                                
Subjt:  CTDTRWRWFE---------------------TEQTR--------------------------------------------------------------AS

Query:  FEMPF---------------------------------------------------------------------------LEMTNTNIPDDVDEGDSTYA
        F  P+                                                                            EMT  N  +D DEGDSTYA
Subjt:  FEMPF---------------------------------------------------------------------------LEMTNTNIPDDVDEGDSTYA

Query:  -TIGGEEIHYIETSSAWSQWRDELAKKSMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATT-IDCRIK
         T   E+I YIET++ WSQWRD+LA  SM T        W          C +ELV  GGW+S+NGTFRP Y + L +MMAE++    + ATT IDCRIK
Subjt:  -TIGGEEIHYIETSSAWSQWRDELAKKSMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATT-IDCRIK

Query:  IMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVK
         +KR FQ I+EM GP+CSGF WN+E KCI+AEK+L+D+WV+
Subjt:  IMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVK

ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]2.6e-8039.7Show/hide
Query:  NDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHF
        ND KRI  +P + +HRIRQ AYFRMIH                          +AGL STE++DVEEMVAMFLH+LAHDVK+RVI+REF RS ET+SRHF
Subjt:  NDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHF

Query:  NLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFET-----EQTRASFEMP--------------------------------------------------
        N+VLL+V+RLH+ELL KPQPV N CTD RWRWFE      + T     +P                                                  
Subjt:  NLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFET-----EQTRASFEMP--------------------------------------------------

Query:  ------------------------FL--------------------------------------------------------------------------
                                FL                                                                          
Subjt:  ------------------------FL--------------------------------------------------------------------------

Query:  -----EMTNTNIPDDVDEGDSTYATIGGEEIHYIETSSAWSQWRDELAKKSMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQ
             EMTN +I D++DE DST+AT   ++IHYIETS+ WSQWRD LA++ M +SSR PK+ WTKEE+A L+ECLVELV  GGWRS+NGTFRP Y + L 
Subjt:  -----EMTNTNIPDDVDEGDSTYATIGGEEIHYIETSSAWSQWRDELAKKSMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQ

Query:  KMMAERMPRHNITATTIDCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSW
        +MMA ++P  NI A+TID RIK+MKR F  ++EMRGP+CSGF WN+E KCI+AEK+++D W
Subjt:  KMMAERMPRHNITATTIDCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSW

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]9.6e-8343.93Show/hide
Query:  NDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHF
        ND KRI  +P + +HRIRQ AYFRMIH +DLVC QSTRMDRRCF ILCHLLR +AGL STE++DVEEMVAMFLH+LAHDVKNRVIQREF RS ET+SRHF
Subjt:  NDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHF

Query:  NLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFET-----EQTRASFEMPFLEMTN---------TNIPDDVD-EGDSTYATIG----------------
        N+VLL+V+RLHDELL KPQPV N CTD RWRWFE      + T     +P  +            TN+    D +GD  Y   G                
Subjt:  NLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFET-----EQTRASFEMPFLEMTN---------TNIPDDVD-EGDSTYATIG----------------

Query:  ------------------------------GEEIHYIE---------TSSAWSQWRDELAKK--------------------------------------
                                      G+  H  E         TS  +   +   A+                                       
Subjt:  ------------------------------GEEIHYIE---------TSSAWSQWRDELAKK--------------------------------------

Query:  -----------------SMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATTIDCRIKIMKRAFQEISE
                         SM +SSR PK+ WTKEE+A     LVELV  GGWRS+NGTFRP Y + L +MMA ++P  NI A+TID RIK+MKR F  ++E
Subjt:  -----------------SMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATTIDCRIKIMKRAFQEISE

Query:  MRGPSCSGFSWNNELKCIIAEKDLYDSW
        MRGP+CSGF WN+E KCI+AEK+++D W
Subjt:  MRGPSCSGFSWNNELKCIIAEKDLYDSW

KAA0036474.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-9143.58Show/hide
Query:  MNDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRH
        MN+NKR+   P D +HRIR+ AYFRMIHE+DLVC QSTRMDRR F ILCHLLR VAGL STE++DVEEMVAMFLH+ AHDVKNRVIQREF RS ETVSRH
Subjt:  MNDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRH

Query:  FNLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFE---------------------TEQTR---------------------------------------
        FN+VLL+VLRL++EL+ +P PVT+ C D RW+ FE                     T +TR                                       
Subjt:  FNLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFE---------------------TEQTR---------------------------------------

Query:  -----------------------ASFEMPF----------------------------------------------------LEMTNTNIPDDVDEGDST
                                 F  P+                                                     EMT  +  +D DEGDST
Subjt:  -----------------------ASFEMPF----------------------------------------------------LEMTNTNIPDDVDEGDST

Query:  YA-TIGGEEIHYIETSSAWSQWRDELAKK-----SMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATT
        YA T   E+I YIET++ WSQWRD+LA        M+TS+RAP++ WT+EE+  L+ECL+ELV  GGW+S+NGTFR  Y + L +MMAE++       T 
Subjt:  YA-TIGGEEIHYIETSSAWSQWRDELAKK-----SMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATT

Query:  IDCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVKILSFV
        IDCRIK +KR FQ I+EMRGP+CSGF WN+E KCI+AEK+L+D+WV++ + +
Subjt:  IDCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVKILSFV

TYK04867.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-7348.27Show/hide
Query:  MNDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRH
        MND++RI   PSD  HRIRQ AYFR IHE++LVC QSTRMDR+ FTIL HLLR V+GL STE++DVEEMVA FLHVLAHDVKNR+IQREF RS ETVSR+
Subjt:  MNDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRH

Query:  FNLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFET-----EQTRASFEMPFLEMTN---------TNIPDDVD-EGDSTYATIGGEEIHYIETSSAWSQ
        FNL+LL+V+R+++E + +    TN C D RW+ FE      ++T     +P ++            TN+ D  D +GD  Y   G       E S   SQ
Subjt:  FNLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFET-----EQTRASFEMPFLEMTN---------TNIPDDVD-EGDSTYATIGGEEIHYIETSSAWSQ

Query:  -WRDELAKKSMATSSRAPKNHWTKEEDAVLIE-----------CLVE------------LVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNI-TATTI
          RD LA+++     R P          V++            CL E            + + GGW+S+NGTFRP Y + L  MMAE++P   + T T I
Subjt:  -WRDELAKKSMATSSRAPKNHWTKEEDAVLIE-----------CLVE------------LVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNI-TATTI

Query:  DCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVK
        DCRIKI+K+ FQ I+EMRGP+CSGF WN+E KCIIAEK+L+D+W++
Subjt:  DCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVK

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein4.6e-8343.93Show/hide
Query:  NDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHF
        ND KRI  +P + +HRIRQ AYFRMIH +DLVC QSTRMDRRCF ILCHLLR +AGL STE++DVEEMVAMFLH+LAHDVKNRVIQREF RS ET+SRHF
Subjt:  NDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHF

Query:  NLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFET-----EQTRASFEMPFLEMTN---------TNIPDDVD-EGDSTYATIG----------------
        N+VLL+V+RLHDELL KPQPV N CTD RWRWFE      + T     +P  +            TN+    D +GD  Y   G                
Subjt:  NLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFET-----EQTRASFEMPFLEMTN---------TNIPDDVD-EGDSTYATIG----------------

Query:  ------------------------------GEEIHYIE---------TSSAWSQWRDELAKK--------------------------------------
                                      G+  H  E         TS  +   +   A+                                       
Subjt:  ------------------------------GEEIHYIE---------TSSAWSQWRDELAKK--------------------------------------

Query:  -----------------SMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATTIDCRIKIMKRAFQEISE
                         SM +SSR PK+ WTKEE+A     LVELV  GGWRS+NGTFRP Y + L +MMA ++P  NI A+TID RIK+MKR F  ++E
Subjt:  -----------------SMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATTIDCRIKIMKRAFQEISE

Query:  MRGPSCSGFSWNNELKCIIAEKDLYDSW
        MRGP+CSGF WN+E KCI+AEK+++D W
Subjt:  MRGPSCSGFSWNNELKCIIAEKDLYDSW

A0A5A7SYW1 Retrotransposon protein5.5e-9243.58Show/hide
Query:  MNDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRH
        MN+NKR+   P D +HRIR+ AYFRMIHE+DLVC QSTRMDRR F ILCHLLR VAGL STE++DVEEMVAMFLH+ AHDVKNRVIQREF RS ETVSRH
Subjt:  MNDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRH

Query:  FNLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFE---------------------TEQTR---------------------------------------
        FN+VLL+VLRL++EL+ +P PVT+ C D RW+ FE                     T +TR                                       
Subjt:  FNLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFE---------------------TEQTR---------------------------------------

Query:  -----------------------ASFEMPF----------------------------------------------------LEMTNTNIPDDVDEGDST
                                 F  P+                                                     EMT  +  +D DEGDST
Subjt:  -----------------------ASFEMPF----------------------------------------------------LEMTNTNIPDDVDEGDST

Query:  YA-TIGGEEIHYIETSSAWSQWRDELAKK-----SMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATT
        YA T   E+I YIET++ WSQWRD+LA        M+TS+RAP++ WT+EE+  L+ECL+ELV  GGW+S+NGTFR  Y + L +MMAE++       T 
Subjt:  YA-TIGGEEIHYIETSSAWSQWRDELAKK-----SMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATT

Query:  IDCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVKILSFV
        IDCRIK +KR FQ I+EMRGP+CSGF WN+E KCI+AEK+L+D+WV++ + +
Subjt:  IDCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVKILSFV

A0A5D3BZA2 Retrotransposon protein6.7e-7448.27Show/hide
Query:  MNDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRH
        MND++RI   PSD  HRIRQ AYFR IHE++LVC QSTRMDR+ FTIL HLLR V+GL STE++DVEEMVA FLHVLAHDVKNR+IQREF RS ETVSR+
Subjt:  MNDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRH

Query:  FNLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFET-----EQTRASFEMPFLEMTN---------TNIPDDVD-EGDSTYATIGGEEIHYIETSSAWSQ
        FNL+LL+V+R+++E + +    TN C D RW+ FE      ++T     +P ++            TN+ D  D +GD  Y   G       E S   SQ
Subjt:  FNLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFET-----EQTRASFEMPFLEMTN---------TNIPDDVD-EGDSTYATIGGEEIHYIETSSAWSQ

Query:  -WRDELAKKSMATSSRAPKNHWTKEEDAVLIE-----------CLVE------------LVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNI-TATTI
          RD LA+++     R P          V++            CL E            + + GGW+S+NGTFRP Y + L  MMAE++P   + T T I
Subjt:  -WRDELAKKSMATSSRAPKNHWTKEEDAVLIE-----------CLVE------------LVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNI-TATTI

Query:  DCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVK
        DCRIKI+K+ FQ I+EMRGP+CSGF WN+E KCIIAEK+L+D+W++
Subjt:  DCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVK

E5GBB2 Retrotransposon protein5.0e-6940.14Show/hide
Query:  MIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHFNLVLLSVLRLHDELLVKPQPVTNT
        MIHE+DLVC QSTRMDRR F ILCHLLR VAGL STE++DVEEMVAMFLHVLAHDVKNRVIQ+EF RS ETVSRHFN+VLL+VLRL++EL+ +P PVT+ 
Subjt:  MIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHFNLVLLSVLRLHDELLVKPQPVTNT

Query:  CTDTRWRWFE---------------------TEQTR--------------------------------------------------------------AS
        C D RW+ FE                     T +TR                                                                
Subjt:  CTDTRWRWFE---------------------TEQTR--------------------------------------------------------------AS

Query:  FEMPF---------------------------------------------------------------------------LEMTNTNIPDDVDEGDSTYA
        F  P+                                                                            EMT  N  +D DEGDSTYA
Subjt:  FEMPF---------------------------------------------------------------------------LEMTNTNIPDDVDEGDSTYA

Query:  -TIGGEEIHYIETSSAWSQWRDELAKKSMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATT-IDCRIK
         T   E+I YIET++ WSQWRD+LA  SM T        W          C +ELV  GGW+S+NGTFRP Y + L +MMAE++    + ATT IDCRIK
Subjt:  -TIGGEEIHYIETSSAWSQWRDELAKKSMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATT-IDCRIK

Query:  IMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVK
         +KR FQ I+EM GP+CSGF WN+E KCI+AEK+L+D+WV+
Subjt:  IMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVK

E5GCB5 Retrotransposon protein1.3e-8039.7Show/hide
Query:  NDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHF
        ND KRI  +P + +HRIRQ AYFRMIH                          +AGL STE++DVEEMVAMFLH+LAHDVK+RVI+REF RS ET+SRHF
Subjt:  NDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHF

Query:  NLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFET-----EQTRASFEMP--------------------------------------------------
        N+VLL+V+RLH+ELL KPQPV N CTD RWRWFE      + T     +P                                                  
Subjt:  NLVLLSVLRLHDELLVKPQPVTNTCTDTRWRWFET-----EQTRASFEMP--------------------------------------------------

Query:  ------------------------FL--------------------------------------------------------------------------
                                FL                                                                          
Subjt:  ------------------------FL--------------------------------------------------------------------------

Query:  -----EMTNTNIPDDVDEGDSTYATIGGEEIHYIETSSAWSQWRDELAKKSMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQ
             EMTN +I D++DE DST+AT   ++IHYIETS+ WSQWRD LA++ M +SSR PK+ WTKEE+A L+ECLVELV  GGWRS+NGTFRP Y + L 
Subjt:  -----EMTNTNIPDDVDEGDSTYATIGGEEIHYIETSSAWSQWRDELAKKSMATSSRAPKNHWTKEEDAVLIECLVELVLFGGWRSNNGTFRPKYHSYLQ

Query:  KMMAERMPRHNITATTIDCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSW
        +MMA ++P  NI A+TID RIK+MKR F  ++EMRGP+CSGF WN+E KCI+AEK+++D W
Subjt:  KMMAERMPRHNITATTIDCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein4.4e-0940.24Show/hide
Query:  FRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHFNLVL
        +R + ++   C Q  RM   CFT LC++L+    LQ T  I +EE VAMFL +  H+   R +   F R+ ETV R F  VL
Subjt:  FRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHFNLVL

AT5G28730.1 unknown protein3.7e-0836.46Show/hide
Query:  IHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHFNLVLLSVLRLHDELLVKPQPV
        I+ N++ C    RM    FT LC +L    GLQS+  I ++E VA+FL + A +   R I   F  + ET+ R F+ VL ++ RL  E  ++P+ V
Subjt:  IHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHFNLVLLSVLRLHDELLVKPQPV

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.4e-1037.23Show/hide
Query:  CHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHFNLVLLSVLRLHDELLVKPQPVTNTCT
        C ++ RMD+  F  LC LL+    L+ T  I +E  +A+FL ++ H+++ R +Q  F  S ET+SRHFN VL +V+ +  +     QP +N+ T
Subjt:  CHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHFNLVLLSVLRLHDELLVKPQPVTNTCT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACAACAAGAGGATAGCGGAAGTACCTTCTGACATGAAGCATAGGATTAGACAGTTCGCTTACTTTCGCATGATCCATGAAAACGACCTCGTGTGTCATCAAAG
TACGCGAATGGACAGACGATGCTTCACCATTTTATGCCATCTACTCCGGGCTGTAGCTGGATTACAGTCCACCGAAATGATCGATGTTGAAGAAATGGTCGCTATGTTCC
TTCACGTACTGGCGCACGACGTGAAAAATCGTGTCATTCAACGTGAGTTCAAGCGATCCGATGAGACTGTTTCACGACATTTTAACCTTGTACTGCTGTCTGTTTTACGC
CTCCATGACGAGCTTTTGGTGAAACCACAACCGGTGACAAACACTTGCACAGATACACGGTGGAGGTGGTTCGAGACCGAACAGACTCGCGCATCCTTCGAGATGCCATT
TCTAGAAATGACAAACACTAACATACCAGATGACGTTGATGAGGGTGACTCTACGTACGCCACCATTGGTGGTGAAGAAATTCATTACATAGAGACCTCGAGTGCATGGA
GTCAATGGAGGGACGAGCTTGCCAAAAAAAGTATGGCAACTTCTTCAAGGGCTCCAAAGAACCACTGGACGAAAGAGGAAGATGCCGTCCTCATTGAATGTCTAGTGGAA
TTGGTATTATTCGGCGGGTGGAGGTCGAACAACGGGACGTTTAGACCCAAGTACCATAGTTATCTACAGAAAATGATGGCCGAGAGGATGCCGAGACATAACATAACGGC
TACGACAATAGATTGTCGAATCAAGATTATGAAAAGAGCATTCCAAGAGATATCTGAAATGAGAGGCCCATCGTGCAGTGGGTTTAGTTGGAACAATGAGCTCAAATGCA
TCATTGCCGAGAAAGACTTGTATGACAGTTGGGTGAAGATTCTGTCATTTGTTGTAAAACACTCTATTGCTATTTCCCAATTGCTCACAATCAAGGCTCTGTTCATACCT
AGCTTCAAAGTAAAGATCGGCCCGTACACATCCGCCATCTTTGCAAAGGTTATATATGTTGAAGAGAGCATAGAGGAAGAAGAGAAGGGTGGAGATGCCGGCCAGCACAG
TGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGACAACAAGAGGATAGCGGAAGTACCTTCTGACATGAAGCATAGGATTAGACAGTTCGCTTACTTTCGCATGATCCATGAAAACGACCTCGTGTGTCATCAAAG
TACGCGAATGGACAGACGATGCTTCACCATTTTATGCCATCTACTCCGGGCTGTAGCTGGATTACAGTCCACCGAAATGATCGATGTTGAAGAAATGGTCGCTATGTTCC
TTCACGTACTGGCGCACGACGTGAAAAATCGTGTCATTCAACGTGAGTTCAAGCGATCCGATGAGACTGTTTCACGACATTTTAACCTTGTACTGCTGTCTGTTTTACGC
CTCCATGACGAGCTTTTGGTGAAACCACAACCGGTGACAAACACTTGCACAGATACACGGTGGAGGTGGTTCGAGACCGAACAGACTCGCGCATCCTTCGAGATGCCATT
TCTAGAAATGACAAACACTAACATACCAGATGACGTTGATGAGGGTGACTCTACGTACGCCACCATTGGTGGTGAAGAAATTCATTACATAGAGACCTCGAGTGCATGGA
GTCAATGGAGGGACGAGCTTGCCAAAAAAAGTATGGCAACTTCTTCAAGGGCTCCAAAGAACCACTGGACGAAAGAGGAAGATGCCGTCCTCATTGAATGTCTAGTGGAA
TTGGTATTATTCGGCGGGTGGAGGTCGAACAACGGGACGTTTAGACCCAAGTACCATAGTTATCTACAGAAAATGATGGCCGAGAGGATGCCGAGACATAACATAACGGC
TACGACAATAGATTGTCGAATCAAGATTATGAAAAGAGCATTCCAAGAGATATCTGAAATGAGAGGCCCATCGTGCAGTGGGTTTAGTTGGAACAATGAGCTCAAATGCA
TCATTGCCGAGAAAGACTTGTATGACAGTTGGGTGAAGATTCTGTCATTTGTTGTAAAACACTCTATTGCTATTTCCCAATTGCTCACAATCAAGGCTCTGTTCATACCT
AGCTTCAAAGTAAAGATCGGCCCGTACACATCCGCCATCTTTGCAAAGGTTATATATGTTGAAGAGAGCATAGAGGAAGAAGAGAAGGGTGGAGATGCCGGCCAGCACAG
TGGCTGA
Protein sequenceShow/hide protein sequence
MNDNKRIAEVPSDMKHRIRQFAYFRMIHENDLVCHQSTRMDRRCFTILCHLLRAVAGLQSTEMIDVEEMVAMFLHVLAHDVKNRVIQREFKRSDETVSRHFNLVLLSVLR
LHDELLVKPQPVTNTCTDTRWRWFETEQTRASFEMPFLEMTNTNIPDDVDEGDSTYATIGGEEIHYIETSSAWSQWRDELAKKSMATSSRAPKNHWTKEEDAVLIECLVE
LVLFGGWRSNNGTFRPKYHSYLQKMMAERMPRHNITATTIDCRIKIMKRAFQEISEMRGPSCSGFSWNNELKCIIAEKDLYDSWVKILSFVVKHSIAISQLLTIKALFIP
SFKVKIGPYTSAIFAKVIYVEESIEEEEKGGDAGQHSG