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PI0022100 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022100
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr04:20701973..20702871
RNA-Seq ExpressionPI0022100
SyntenyPI0022100
Gene Ontology termsGO:0048507 - meristem development (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.7e-3359.48Show/hide
Query:  QRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSSSYMHGHGRGRG
        +R   VQEPD+LEEV+QH EE+ PP+ QTQSE + VSP+M+M  FG  YYDSGVGQSSDFG+G                YYDLG+DPSSSYMHGHGRGRG
Subjt:  QRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSSSYMHGHGRGRG

Query:  EHNEYLYYEAPAAVHE---------------QPDEQQQQENQDGLEQQRVHGR
        EHNEYLYYE PAAV E               Q DEQQQQENQ+ ++QQRV  R
Subjt:  EHNEYLYYEAPAAVHE---------------QPDEQQQQENQDGLEQQRVHGR

KAA0035034.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.9e-3357.5Show/hide
Query:  MTNAPRDSTNQRHARVQEPDELEEVEQHVEEMPPPVR-QTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSS
        + N   D   +R   VQEPD+LEEV+QH EE+PP  + QTQSE + VSP+M+M  FG  YYDSGVGQSSDFG+G                YYDLG+DPS 
Subjt:  MTNAPRDSTNQRHARVQEPDELEEVEQHVEEMPPPVR-QTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSS

Query:  SYMHGHGRGRGEHNEYLYYEAPAAVHEQPDEQQQQEN-----QDGLEQQRVHGRGCEMSD
        SYMHGHGRGRGEHNEYLYYE PAAV EQ DEQQQQEN     Q   +QQ+ +    E SD
Subjt:  SYMHGHGRGRGEHNEYLYYEAPAAVHEQPDEQQQQEN-----QDGLEQQRVHGRGCEMSD

KAA0051098.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.8e-3869.34Show/hide
Query:  QRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG---------------YYDLGTDPSSSYMHGHGRGRGE
        +R A VQE DELEEV+QH+EE+ PPV QT+SETS VSPM++MSAFG GYYD GV QSSDFG G               YYDLGT+PSSSYMHGHGRGRGE
Subjt:  QRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG---------------YYDLGTDPSSSYMHGHGRGRGE

Query:  HNEYLYYEAPAAVHEQPDEQQQQENQDGLEQQRVHGR
        HNEYLYY APAAV E+P+EQQQQENQ+ L+QQRV  R
Subjt:  HNEYLYYEAPAAVHEQPDEQQQQENQDGLEQQRVHGR

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.9e-3358.82Show/hide
Query:  QRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSSSYMHGHGRGRG
        +R   VQEPD+LEEV+QH EE+ PP+ QT+SE + VSP+M+M  FG  YYDSGVGQSSDFG+G                YYDLG+DPSSSYMHGHGRGRG
Subjt:  QRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSSSYMHGHGRGRG

Query:  EHNEYLYYEAPAAVHEQPDE---------------QQQQENQDGLEQQRVHGR
        EHNEYLYYE PAAV EQ DE               QQQQENQ+ ++QQRV  R
Subjt:  EHNEYLYYEAPAAVHEQPDE---------------QQQQENQDGLEQQRVHGR

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.6e-3359.09Show/hide
Query:  QRHARVQEPDELEEVEQHVEEMPPPVR-QTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSSSYMHGHGRGR
        +R   VQEPD+LEEV+QH EE+PP  + QTQSE + VSP+M+M  FG  YYDSGVGQSSDFG+G                YYDLG+DPSSSYMHGHGRGR
Subjt:  QRHARVQEPDELEEVEQHVEEMPPPVR-QTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSSSYMHGHGRGR

Query:  GEHNEYLYYEAPAAVHE---------------QPDEQQQQENQDGLEQQRVHGR
        GEHNEYLYYE PAAV E               Q DEQQQQENQ+ ++QQRV  R
Subjt:  GEHNEYLYYEAPAAVHE---------------QPDEQQQQENQDGLEQQRVHGR

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein1.3e-3359.48Show/hide
Query:  QRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSSSYMHGHGRGRG
        +R   VQEPD+LEEV+QH EE+ PP+ QTQSE + VSP+M+M  FG  YYDSGVGQSSDFG+G                YYDLG+DPSSSYMHGHGRGRG
Subjt:  QRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSSSYMHGHGRGRG

Query:  EHNEYLYYEAPAAVHE---------------QPDEQQQQENQDGLEQQRVHGR
        EHNEYLYYE PAAV E               Q DEQQQQENQ+ ++QQRV  R
Subjt:  EHNEYLYYEAPAAVHE---------------QPDEQQQQENQDGLEQQRVHGR

A0A5A7SUU1 Serine/threonine-protein phosphatase 7 long form-like protein3.8e-3357.5Show/hide
Query:  MTNAPRDSTNQRHARVQEPDELEEVEQHVEEMPPPVR-QTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSS
        + N   D   +R   VQEPD+LEEV+QH EE+PP  + QTQSE + VSP+M+M  FG  YYDSGVGQSSDFG+G                YYDLG+DPS 
Subjt:  MTNAPRDSTNQRHARVQEPDELEEVEQHVEEMPPPVR-QTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSS

Query:  SYMHGHGRGRGEHNEYLYYEAPAAVHEQPDEQQQQEN-----QDGLEQQRVHGRGCEMSD
        SYMHGHGRGRGEHNEYLYYE PAAV EQ DEQQQQEN     Q   +QQ+ +    E SD
Subjt:  SYMHGHGRGRGEHNEYLYYEAPAAVHEQPDEQQQQEN-----QDGLEQQRVHGRGCEMSD

A0A5A7U731 Serine/threonine-protein phosphatase 7 long form-like protein2.3e-3869.34Show/hide
Query:  QRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG---------------YYDLGTDPSSSYMHGHGRGRGE
        +R A VQE DELEEV+QH+EE+ PPV QT+SETS VSPM++MSAFG GYYD GV QSSDFG G               YYDLGT+PSSSYMHGHGRGRGE
Subjt:  QRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG---------------YYDLGTDPSSSYMHGHGRGRGE

Query:  HNEYLYYEAPAAVHEQPDEQQQQENQDGLEQQRVHGR
        HNEYLYY APAAV E+P+EQQQQENQ+ L+QQRV  R
Subjt:  HNEYLYYEAPAAVHEQPDEQQQQENQDGLEQQRVHGR

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein3.8e-3358.82Show/hide
Query:  QRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSSSYMHGHGRGRG
        +R   VQEPD+LEEV+QH EE+ PP+ QT+SE + VSP+M+M  FG  YYDSGVGQSSDFG+G                YYDLG+DPSSSYMHGHGRGRG
Subjt:  QRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSSSYMHGHGRGRG

Query:  EHNEYLYYEAPAAVHEQPDE---------------QQQQENQDGLEQQRVHGR
        EHNEYLYYE PAAV EQ DE               QQQQENQ+ ++QQRV  R
Subjt:  EHNEYLYYEAPAAVHEQPDE---------------QQQQENQDGLEQQRVHGR

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.3e-3359.09Show/hide
Query:  QRHARVQEPDELEEVEQHVEEMPPPVR-QTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSSSYMHGHGRGR
        +R   VQEPD+LEEV+QH EE+PP  + QTQSE + VSP+M+M  FG  YYDSGVGQSSDFG+G                YYDLG+DPSSSYMHGHGRGR
Subjt:  QRHARVQEPDELEEVEQHVEEMPPPVR-QTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQG----------------YYDLGTDPSSSYMHGHGRGR

Query:  GEHNEYLYYEAPAAVHE---------------QPDEQQQQENQDGLEQQRVHGR
        GEHNEYLYYE PAAV E               Q DEQQQQENQ+ ++QQRV  R
Subjt:  GEHNEYLYYEAPAAVHE---------------QPDEQQQQENQDGLEQQRVHGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAACGCACCGAGAGATTCTACGAACCAGAGACATGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACACGTGGAAGAAATGCCTCCTCCTGTGAG
ACAAACACAGAGCGAGACTAGTGACGTTAGTCCAATGATGGTGATGTCGGCATTTGGAATGGGATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGACAAGGAT
ACTACGATTTAGGGACCGATCCATCATCTTCATACATGCATGGACATGGACGTGGTCGTGGAGAACATAACGAATATTTGTATTACGAAGCGCCTGCAGCGGTACACGAG
CAGCCAGATGAGCAACAACAACAAGAGAATCAAGATGGACTAGAGCAACAAAGAGTGCATGGTCGTGGTTGCGAAATGTCAGATTCTATTGTGGAATATGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCAACGCACCGAGAGATTCTACGAACCAGAGACATGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACACGTGGAAGAAATGCCTCCTCCTGTGAG
ACAAACACAGAGCGAGACTAGTGACGTTAGTCCAATGATGGTGATGTCGGCATTTGGAATGGGATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGACAAGGAT
ACTACGATTTAGGGACCGATCCATCATCTTCATACATGCATGGACATGGACGTGGTCGTGGAGAACATAACGAATATTTGTATTACGAAGCGCCTGCAGCGGTACACGAG
CAGCCAGATGAGCAACAACAACAAGAGAATCAAGATGGACTAGAGCAACAAAGAGTGCATGGTCGTGGTTGCGAAATGTCAGATTCTATTGTGGAATATGGATGA
Protein sequenceShow/hide protein sequence
MTNAPRDSTNQRHARVQEPDELEEVEQHVEEMPPPVRQTQSETSDVSPMMVMSAFGMGYYDSGVGQSSDFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYEAPAAVHE
QPDEQQQQENQDGLEQQRVHGRGCEMSDSIVEYG