; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022105 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022105
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionnuclear pore complex protein NUP54
Genome locationchr10:17776109..17780197
RNA-Seq ExpressionPI0022105
SyntenyPI0022105
Gene Ontology termsGO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0036228 - protein localization to nuclear inner membrane (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR024864 - Nucleoporin Nup54/Nup57/Nup44
IPR025712 - Nucleoporin Nup54, alpha-helical domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135312.1 nuclear pore complex protein NUP54 [Cucumis sativus]2.2e-20297.44Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA
        MFGAQPSSSAFGTPQS+PAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP  QQQQQLQQSP+FPQSSA
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA

Query:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER
        TGFGFQTPF APQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KPPGVSDIMWAEAMAKLEGMESADRER
Subjt:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER

Query:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT
        LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT
Subjt:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT

Query:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        RQLKGSGAELSRRVQNLLT+TRGQ+NGSGPGNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_008446043.1 PREDICTED: nuclear pore complex protein NUP54 [Cucumis melo]1.7e-20298.21Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA
        MFGAQ SSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP  QQQQQLQQS LFPQSSA
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA

Query:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER
        TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER
Subjt:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER

Query:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT
        LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALIT
Subjt:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT

Query:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        RQLKGSGAELS+RVQNLLTITRGQ+NGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_023515339.1 nuclear pore complex protein NUP54-like [Cucurbita pepo subsp. pepo]3.1e-18893.06Show/hide
Query:  FGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSAT
        FG   S+ AFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNL STPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQ QQSPLF Q  AT
Subjt:  FGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSAT

Query:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAPQS+PFPNAQL TQMAPVAPLPF LADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP GVSD MWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVIL+D+ERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKL+LITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        Q K SGAELSRRVQNLL ITRGQ NGSG GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAED EM DD S
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_023542822.1 nuclear pore complex protein NUP54 [Cucurbita pepo subsp. pepo]1.5e-18789.8Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP---LQQQQQQ
        MFGAQ SSS         AFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGN SSTPAFGTPS+SSFATGFGSSLFSTPFSSQP    QQQQQQ
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP---LQQQQQQ

Query:  LQQSPLFPQSSATGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMA
         QQSPLF   +ATGFGFQTPFAAPQS+PFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQYRAKP GVSDIMWAEAMA
Subjt:  LQQSPLFPQSSATGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMA

Query:  KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKG
        KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVK LQRHFLADTLPW+QRLKQKEQGLQRRLLR+MR+VEALESKGCRVP+M G
Subjt:  KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKG

Query:  EAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADD
        EAELAEKLALITRQL+GSGAELSRRV+NLLTIT GQ+NGSG GNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DD
Subjt:  EAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADD

Query:  AS
         S
Subjt:  AS

XP_038893426.1 nuclear pore complex protein NUP54 [Benincasa hispida]2.3e-19996.67Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA
        MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP  Q QQQLQQSPLFPQ +A
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA

Query:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER
        TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KP GVSDIMWAEAMAKLEGMESADRER
Subjt:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER

Query:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT
        LWPQLVQGFKDLSQRLKIQDEVILSDS+RLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT
Subjt:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT

Query:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        RQLKGSGAELSRRVQNLLTITRGQ+NGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAED+EM DDAS
Subjt:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

TrEMBL top hitse value%identityAlignment
A0A0A0KPW8 Nup54 domain-containing protein1.1e-20297.44Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA
        MFGAQPSSSAFGTPQS+PAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP  QQQQQLQQSP+FPQSSA
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA

Query:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER
        TGFGFQTPF APQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KPPGVSDIMWAEAMAKLEGMESADRER
Subjt:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER

Query:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT
        LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT
Subjt:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT

Query:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        RQLKGSGAELSRRVQNLLT+TRGQ+NGSGPGNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A1S3BE47 nuclear pore complex protein NUP548.1e-20398.21Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA
        MFGAQ SSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP  QQQQQLQQS LFPQSSA
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA

Query:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER
        TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER
Subjt:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER

Query:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT
        LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALIT
Subjt:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT

Query:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        RQLKGSGAELS+RVQNLLTITRGQ+NGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A5A7SSX4 Nuclear pore complex protein NUP548.1e-20398.21Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA
        MFGAQ SSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP  QQQQQLQQS LFPQSSA
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA

Query:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER
        TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER
Subjt:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER

Query:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT
        LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALIT
Subjt:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT

Query:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        RQLKGSGAELS+RVQNLLTITRGQ+NGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A6J1DDY9 nuclear pore complex protein NUP544.8e-18792.05Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA
        MFGAQPSSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPSTS+F TGFGSSLFSTPFSSQP QQ QQQ QQSPLF Q  A
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSA

Query:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER
        TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+RAKP GVSDIMWAEAM KLEGMESADRER
Subjt:  TGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRER

Query:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT
        LWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT
Subjt:  LWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALIT

Query:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        RQLKGSGAELSRRVQNLLT TRGQ+NGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DDAS
Subjt:  RQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A6J1G105 nuclear pore complex protein NUP545.3e-18690.49Show/hide
Query:  FGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSAT
        FG   S+ AFGTPQSTPAFGTPQSTPAFGTP STPAFGTPSASPAFGN SSTPAFGTPS+SSFATGFGSSLFSTPFSSQP QQQQ   QQSPLF   +AT
Subjt:  FGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSAT

Query:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAPQS+PFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQYRAKP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVK LQRHFLADTLPW+QRLKQKEQGLQRRLLR+MR+VEALESKGCRVP+M GEAELAE+LALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QL+GSGAELSRRV+NLLTIT GQ+NGSG GNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DD S
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

SwissProt top hitse value%identityAlignment
P70582 Nuclear pore complex protein Nup542.5e-0725Show/hide
Query:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        P GV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    T+  + + K+K   L  R L+V+   E
Subjt:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD
             G    +   E +L  +L  I  +L  +  +   R+  L++  R Q++      ++  +    I    L ++++ L+QQ E ++ L +++K D+ D
Subjt:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD

Query:  MEII
        ++++
Subjt:  MEII

Q8BTS4 Nuclear pore complex protein Nup542.5e-0725Show/hide
Query:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        P GV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    T+  + + K+K   L  R L+V+   E
Subjt:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD
             G    +   E +L  +L  I  +L  +  +   R+  L++  R Q++      ++  +    I    L ++++ L+QQ E ++ L +++K D+ D
Subjt:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD

Query:  MEII
        ++++
Subjt:  MEII

Q8GYF7 Nuclear pore complex protein NUP548.5e-14171.96Show/hide
Query:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSS-QPLQQQQQQLQQSP--LFPQSSATGFGFQTPF----AA
        FGTP S+P+FGTP+STPAFGT  +SPAFG  S+TPAFGTPS  SF++ GFGSSLFS+PFSS QP QQQQQQ QQ P  LF Q  ++ FGFQ+PF      
Subjt:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSS-QPLQQQQQQLQQSP--LFPQSSATGFGFQTPF----AA

Query:  PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
         Q TPFPNAQLTTQMAPVAP+P+SLADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQYR KP  VSDIMWAEAM+KLEGM+S +RERLWPQLVQGFKD
Subjt:  PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD

Query:  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS
        LSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P ++RL+QKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Subjt:  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS

Query:  RRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA
        RRVQ+L TI+R Q+N    G+S+YL GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD+RDMEI++AED EMA D+
Subjt:  RRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA

Q9VDV3 Nuclear pore complex protein Nup582.2e-0835.76Show/hide
Query:  FGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSL-----------FSTPFSSQPLQQQ-----
        FG   ++SAFG P +TPAFG   +TPAFG PA+TPAFG P+A+ AFG  ++T AFG P+ S+ A+ FG+             F+TP +S P         
Subjt:  FGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSL-----------FSTPFSSQPLQQQ-----

Query:  -QQQLQQSPLFPQSSATGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFS
               +   P S ++G G    F  PQ+T   +    T        PF+
Subjt:  -QQQLQQSPLFPQSSATGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFS

Arabidopsis top hitse value%identityAlignment
AT1G24310.1 unknown protein6.0e-14271.96Show/hide
Query:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSS-QPLQQQQQQLQQSP--LFPQSSATGFGFQTPF----AA
        FGTP S+P+FGTP+STPAFGT  +SPAFG  S+TPAFGTPS  SF++ GFGSSLFS+PFSS QP QQQQQQ QQ P  LF Q  ++ FGFQ+PF      
Subjt:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSS-QPLQQQQQQLQQSP--LFPQSSATGFGFQTPF----AA

Query:  PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
         Q TPFPNAQLTTQMAPVAP+P+SLADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQYR KP  VSDIMWAEAM+KLEGM+S +RERLWPQLVQGFKD
Subjt:  PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD

Query:  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS
        LSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P ++RL+QKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Subjt:  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS

Query:  RRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA
        RRVQ+L TI+R Q+N    G+S+YL GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD+RDMEI++AED EMA D+
Subjt:  RRVQNLLTITRGQSNGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGAGCTCAACCGTCCTCCTCCGCCTTCGGCACTCCACAATCAACACCGGCCTTTGGCACTCCGCAATCAACTCCGGCATTTGGCACGCCGGCGTCCACTCCTGC
CTTTGGAACTCCATCGGCGTCTCCTGCATTTGGCAATCTTTCCTCAACTCCTGCTTTCGGAACTCCATCTACGTCGTCGTTTGCTACCGGCTTCGGCTCCTCTCTCTTCT
CTACTCCATTCTCTTCTCAGCCTTTACAACAGCAGCAGCAGCAGTTGCAGCAATCGCCGCTGTTTCCGCAATCATCCGCTACTGGATTCGGTTTCCAGACTCCGTTTGCA
GCGCCTCAGTCCACTCCATTTCCAAATGCTCAACTGACCACTCAGATGGCCCCGGTCGCACCGCTTCCTTTCTCCCTGGCAGATCGAGATATTCAAGCAATTGTTGAGGC
TTACAAGGACGACGCAGGAAACCCTAAGTATGCTTTCAAGCATTTGTTGTTCAGTGTAACTGATCCTCAGTATAGGGCGAAGCCTCCTGGTGTATCGGATATAATGTGGG
CTGAGGCAATGGCAAAGCTCGAAGGCATGGAAAGTGCTGATAGAGAGCGTTTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGAT
GAAGTCATTCTTTCCGATTCTGAGAGATTACGCATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCATTTTCTAGCCGATACTCTACCTTGGGTTCAAAGATTGAAACA
AAAGGAGCAAGGTCTGCAAAGGCGTCTGTTGAGAGTTATGAGAATTGTGGAGGCACTAGAAAGTAAAGGTTGCCGAGTGCCTGTAATGAAAGGAGAGGCTGAGTTGGCAG
AGAAGTTAGCTTTGATAACGAGGCAGTTGAAGGGCTCCGGGGCAGAACTTTCAAGGAGGGTGCAAAATTTGCTTACAATTACTCGCGGTCAATCAAATGGCTCCGGTCCT
GGTAATTCCATCTATCTTCAAGGATCCGCAAAAATACACGAACAGAGCCTTGCTGATATGCAGGAGGTTTTGCAGCAGCAGACTGAGGCCATTGCTAGACTTGGAAATGT
TTTAAAGCGAGATGTTAGAGACATGGAAATCATAATGGCTGAAGATAAAGAGATGGCAGATGATGCGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGGAGCTCAACCGTCCTCCTCCGCCTTCGGCACTCCACAATCAACACCGGCCTTTGGCACTCCGCAATCAACTCCGGCATTTGGCACGCCGGCGTCCACTCCTGC
CTTTGGAACTCCATCGGCGTCTCCTGCATTTGGCAATCTTTCCTCAACTCCTGCTTTCGGAACTCCATCTACGTCGTCGTTTGCTACCGGCTTCGGCTCCTCTCTCTTCT
CTACTCCATTCTCTTCTCAGCCTTTACAACAGCAGCAGCAGCAGTTGCAGCAATCGCCGCTGTTTCCGCAATCATCCGCTACTGGATTCGGTTTCCAGACTCCGTTTGCA
GCGCCTCAGTCCACTCCATTTCCAAATGCTCAACTGACCACTCAGATGGCCCCGGTCGCACCGCTTCCTTTCTCCCTGGCAGATCGAGATATTCAAGCAATTGTTGAGGC
TTACAAGGACGACGCAGGAAACCCTAAGTATGCTTTCAAGCATTTGTTGTTCAGTGTAACTGATCCTCAGTATAGGGCGAAGCCTCCTGGTGTATCGGATATAATGTGGG
CTGAGGCAATGGCAAAGCTCGAAGGCATGGAAAGTGCTGATAGAGAGCGTTTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGAT
GAAGTCATTCTTTCCGATTCTGAGAGATTACGCATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCATTTTCTAGCCGATACTCTACCTTGGGTTCAAAGATTGAAACA
AAAGGAGCAAGGTCTGCAAAGGCGTCTGTTGAGAGTTATGAGAATTGTGGAGGCACTAGAAAGTAAAGGTTGCCGAGTGCCTGTAATGAAAGGAGAGGCTGAGTTGGCAG
AGAAGTTAGCTTTGATAACGAGGCAGTTGAAGGGCTCCGGGGCAGAACTTTCAAGGAGGGTGCAAAATTTGCTTACAATTACTCGCGGTCAATCAAATGGCTCCGGTCCT
GGTAATTCCATCTATCTTCAAGGATCCGCAAAAATACACGAACAGAGCCTTGCTGATATGCAGGAGGTTTTGCAGCAGCAGACTGAGGCCATTGCTAGACTTGGAAATGT
TTTAAAGCGAGATGTTAGAGACATGGAAATCATAATGGCTGAAGATAAAGAGATGGCAGATGATGCGAGTTAA
Protein sequenceShow/hide protein sequence
MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQLQQSPLFPQSSATGFGFQTPFA
APQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQD
EVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGP
GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS