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PI0022140 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022140
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr07:18187381..18188549
RNA-Seq ExpressionPI0022140
SyntenyPI0022140
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032265.1 MuDRA-like transposase [Cucumis melo var. makuwa]3.1e-1981.25Show/hide
Query:  VEFLVVDG-VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAG
        V F   DG VRPIGNH DWS+VEVN NILPPVFRRPAGRPRKRRIPSIGEVSK+ KCSRCK  G
Subjt:  VEFLVVDG-VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAG

KAA0042333.1 uncharacterized protein E6C27_scaffold795G00290 [Cucumis melo var. makuwa]1.4e-1990.91Show/hide
Query:  VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAG
        VRPIGNH DWS+VEVN NILPPVFRRPAGRPRKRRIPS GEVSKSSKCSRCK AG
Subjt:  VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAG

KAA0046918.1 uncharacterized protein E6C27_scaffold230G00860 [Cucumis melo var. makuwa]4.8e-2082.54Show/hide
Query:  VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAGVTTTSSSF
        VRPIGNH DWS+VEVN NILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCK AG    + +F
Subjt:  VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAGVTTTSSSF

TYK03234.1 uncharacterized protein E5676_scaffold298G00470 [Cucumis melo var. makuwa]1.8e-1990.91Show/hide
Query:  VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAG
        VRPIGNH DWS+VEVN NILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCK  G
Subjt:  VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAG

TYK14893.1 MuDRA-like transposase [Cucumis melo var. makuwa]8.1e-2065.93Show/hide
Query:  KASFVNPVSEVEF-----LVVDG-----VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAGVTTTSSSF
        ++  VNPVSEVEF      V+       VRPIGNH DWS+VEVN NILP VFRRPAGRPRKRRIPSIGEVSKSSK SRCK AG    + +F
Subjt:  KASFVNPVSEVEF-----LVVDG-----VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAGVTTTSSSF

TrEMBL top hitse value%identityAlignment
A0A5A7TGH6 SWIM-type domain-containing protein6.7e-2090.91Show/hide
Query:  VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAG
        VRPIGNH DWS+VEVN NILPPVFRRPAGRPRKRRIPS GEVSKSSKCSRCK AG
Subjt:  VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAG

A0A5A7TVL2 ZnF_PMZ domain-containing protein2.3e-2082.54Show/hide
Query:  VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAGVTTTSSSF
        VRPIGNH DWS+VEVN NILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCK AG    + +F
Subjt:  VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAGVTTTSSSF

A0A5A7UE96 Uncharacterized protein1.5e-1969.74Show/hide
Query:  MNHKASFVNPVSEVEFLVVDG-VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGA
        ++   SF+   + V     DG VR IGNH DWS+VEVN NILPP+FRRPAGRPRKRRIPSIGEVSKSSKCSRCK A
Subjt:  MNHKASFVNPVSEVEFLVVDG-VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGA

A0A5D3BVP4 SWIM-type domain-containing protein8.8e-2090.91Show/hide
Query:  VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAG
        VRPIGNH DWS+VEVN NILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCK  G
Subjt:  VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAG

A0A5D3CSL6 MuDRA-like transposase3.9e-2065.93Show/hide
Query:  KASFVNPVSEVEF-----LVVDG-----VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAGVTTTSSSF
        ++  VNPVSEVEF      V+       VRPIGNH DWS+VEVN NILP VFRRPAGRPRKRRIPSIGEVSKSSK SRCK AG    + +F
Subjt:  KASFVNPVSEVEF-----LVVDG-----VRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAGVTTTSSSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCACAAAGCTTCATTTGTTAATCCTGTGAGTGAAGTTGAATTTCTAGTAGTTGATGGAGTTCGTCCGATTGGTAACCATATTGATTGGAGTATTGTGGAGGTGAA
TGGCAATATATTGCCTCCAGTATTTAGACGTCCAGCAGGAAGGCCTCGAAAAAGAAGGATTCCTTCTATTGGTGAAGTTTCGAAGAGTTCAAAATGTAGTCGTTGTAAGG
GAGCTGGTGTAACGACCACAAGTTCGAGCTTCTTTAAGTTCTTCTTCTCTTTTTCCTTGCTCTCAGCCGCCGGAAAACCCTCTTCTCCCCAGTTCCCTGCGCCGCGCGTT
TCGTCTTCTCCGTTCGAAGGTCCTCCGTTTGTCCTTGCTGTCGGAAAGACTTGGGTTTTAGTTTGGGTGTTCTGGCGAAGCGTAGCTCTTTGGAAACTCTTCGTGGCCGT
CTCCGTTCGTTGGATTTCTCCTCTGTGTTCGTCCCGCGAAGTAACTCCTCTTTGGCAGATCCTTGTTCGGGAAGTGGGGTGTTGTCCGCGAACTAAGGAAGTCCGCGAAA
CTCAGAAGAAGTTCGCAAGCCCCCTTGCAACCTGTGGTTCGCGTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCACAAAGCTTCATTTGTTAATCCTGTGAGTGAAGTTGAATTTCTAGTAGTTGATGGAGTTCGTCCGATTGGTAACCATATTGATTGGAGTATTGTGGAGGTGAA
TGGCAATATATTGCCTCCAGTATTTAGACGTCCAGCAGGAAGGCCTCGAAAAAGAAGGATTCCTTCTATTGGTGAAGTTTCGAAGAGTTCAAAATGTAGTCGTTGTAAGG
GAGCTGGTGTAACGACCACAAGTTCGAGCTTCTTTAAGTTCTTCTTCTCTTTTTCCTTGCTCTCAGCCGCCGGAAAACCCTCTTCTCCCCAGTTCCCTGCGCCGCGCGTT
TCGTCTTCTCCGTTCGAAGGTCCTCCGTTTGTCCTTGCTGTCGGAAAGACTTGGGTTTTAGTTTGGGTGTTCTGGCGAAGCGTAGCTCTTTGGAAACTCTTCGTGGCCGT
CTCCGTTCGTTGGATTTCTCCTCTGTGTTCGTCCCGCGAAGTAACTCCTCTTTGGCAGATCCTTGTTCGGGAAGTGGGGTGTTGTCCGCGAACTAAGGAAGTCCGCGAAA
CTCAGAAGAAGTTCGCAAGCCCCCTTGCAACCTGTGGTTCGCGTTGGTGA
Protein sequenceShow/hide protein sequence
MNHKASFVNPVSEVEFLVVDGVRPIGNHIDWSIVEVNGNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKGAGVTTTSSSFFKFFFSFSLLSAAGKPSSPQFPAPRV
SSSPFEGPPFVLAVGKTWVLVWVFWRSVALWKLFVAVSVRWISPLCSSREVTPLWQILVREVGCCPRTKEVRETQKKFASPLATCGSRW