CuGenDBv2

Gene ID	PI0022152
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	zinc finger SWIM domain-containing protein 7
Genome location	chr07:536505..538875
RNA-Seq Expression	PI0022152
Synteny	PI0022152
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0097196 - Shu complex (cellular component) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR007527 - Zinc finger, SWIM-type

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004152266.1 zinc finger SWIM domain-containing protein 7 isoform X1 [Cucumis sativus]

1.9e-65

97.73

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Query:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPS RSIFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASVGACIEVKVPDEELAILLSNL
        KHQLAARLAASVGACIEVKV DEELAILLSNL
Subjt:  KHQLAARLAASVGACIEVKVPDEELAILLSNL

XP_008454376.1 PREDICTED: zinc finger SWIM domain-containing protein 7 [Cucumis melo]

2.2e-66

98.48

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Query:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSASIVVAEAVWK+IESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASVGACIEVKVPDEELAILLSNL
        KHQLAARLAASVGACIEVKV DEELAILLSNL
Subjt:  KHQLAARLAASVGACIEVKVPDEELAILLSNL

XP_022942858.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata]

2.8e-61

92.42

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Query:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS + AEAVWKQIESTR VTDDQLSILHFLFGKNFERATRIVDQ GVKKISG PS RSIFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASVGACIEVKVPDEELAILLSNL
        KHQLAARLAAS+GACIEVKV DEELAILLSNL
Subjt:  KHQLAARLAASVGACIEVKVPDEELAILLSNL

XP_022983272.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima]

2.6e-62

93.18

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Query:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS +VAEAVWKQIESTR VTDDQLSILHFLFGKNFERATRIVDQ GVKKISG PS RSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASVGACIEVKVPDEELAILLSNL
        KHQLAARLAAS+GAC+EVKV DEELAILLSNL
Subjt:  KHQLAARLAASVGACIEVKVPDEELAILLSNL

XP_038903696.1 zinc finger SWIM domain-containing protein 7 [Benincasa hispida]

3.3e-62

93.18

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Query:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS +VAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISG PS RSIFQV+GESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASVGACIEVKVPDEELAILLSNL
        KHQLAARLA S+GACIEVKV DEELAILLSNL
Subjt:  KHQLAARLAASVGACIEVKVPDEELAILLSNL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWG5 SWIM-type domain-containing protein

9.2e-66

97.73

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Query:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPS RSIFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASVGACIEVKVPDEELAILLSNL
        KHQLAARLAASVGACIEVKV DEELAILLSNL
Subjt:  KHQLAARLAASVGACIEVKVPDEELAILLSNL

A0A1S3BZP2 zinc finger SWIM domain-containing protein 7

1.1e-66

98.48

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Query:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSASIVVAEAVWK+IESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASVGACIEVKVPDEELAILLSNL
        KHQLAARLAASVGACIEVKV DEELAILLSNL
Subjt:  KHQLAARLAASVGACIEVKVPDEELAILLSNL

A0A6J1D5Z4 zinc finger SWIM domain-containing protein 7

1.3e-59

89.39

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Query:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS +VAEAVWKQI+STR VTDDQLS+LHFLFGKNFERATRIVDQRGVKKI G PS RSIFQVVGESRRKEEYFCFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASVGACIEVKVPDEELAILLSNL
        KHQLAARLAAS+GA IE KV DEELA+LLSNL
Subjt:  KHQLAARLAASVGACIEVKVPDEELAILLSNL

A0A6J1FSJ7 zinc finger SWIM domain-containing protein 7 isoform X2

1.4e-61

92.42

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Query:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS + AEAVWKQIESTR VTDDQLSILHFLFGKNFERATRIVDQ GVKKISG PS RSIFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASVGACIEVKVPDEELAILLSNL
        KHQLAARLAAS+GACIEVKV DEELAILLSNL
Subjt:  KHQLAARLAASVGACIEVKVPDEELAILLSNL

A0A6J1J6W2 zinc finger SWIM domain-containing protein 7 isoform X2

1.2e-62

93.18

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Query:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS +VAEAVWKQIESTR VTDDQLSILHFLFGKNFERATRIVDQ GVKKISG PS RSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASVGACIEVKVPDEELAILLSNL
        KHQLAARLAAS+GAC+EVKV DEELAILLSNL
Subjt:  KHQLAARLAASVGACIEVKVPDEELAILLSNL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G33925.1 unknown protein

1.1e-47

65.15

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Query:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        M+ +++VA+AVW  IEST  VT++QLSIL  LFGKN E+ATRI+D+RGVKKISG PS RSIFQVVGES+++EEY CFP ++C CYSFFYD+V+RGE  CC
Subjt:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASVGACIEVKVPDEELAILLSNL
        KHQLAARLA+S+G   E++V D+ LA++LS +
Subjt:  KHQLAARLAASVGACIEVKVPDEELAILLSNL

AT4G33925.2 unknown protein

5.7e-44

67.23

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Query:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        M+ +++VA+AVW  IEST  VT++QLSIL  LFGKN E+ATRI+D+RGVKKISG PS RSIFQVVGES+++EEY CFP ++C CYSFFYD+V+RGE  CC
Subjt:  MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASVGACIEVK
        KHQLAARLA+S+G   E++
Subjt:  KHQLAARLAASVGACIEVK

Sequences

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CDS sequence

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ATGAGTGCGAGTATTGTGGTAGCTGAAGCTGTGTGGAAGCAGATCGAGTCCACTCGATTAGTGACTGATGATCAGCTTTCAATCTTGCATTTCTTGTTTGGCAAGAACTT
CGAGCGAGCTACTCGAATTGTTGATCAAAGAGGGGTCAAGAAAATTTCAGGCCACCCAAGCAGACGGTCTATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGT
ATTTCTGTTTTCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAACTTTGTTGCAAGCATCAATTAGCTGCAAGGCTTGCTGCT
TCAGTGGGGGCTTGCATTGAAGTTAAAGTACCTGATGAAGAGCTGGCAATATTGTTGTCCAATCTCTAA

mRNA sequence

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CAAAATTTAAAAAATGAGTATGTGAAAAAGGAAAAATTGGTTGTTATTTGGGACAAAGAAGAAGAATTTGGGTGGGAATGAGTGCGAGTATTGTGGTAGCTGAAGCTGTG
TGGAAGCAGATCGAGTCCACTCGATTAGTGACTGATGATCAGCTTTCAATCTTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGAATTGTTGATCAAAGAGG
GGTCAAGAAAATTTCAGGCCACCCAAGCAGACGGTCTATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATTTCTGTTTTCCAGAAAACTTTTGTGCCTGTT
ATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAACTTTGTTGCAAGCATCAATTAGCTGCAAGGCTTGCTGCTTCAGTGGGGGCTTGCATTGAAGTTAAAGTACCT
GATGAAGAGCTGGCAATATTGTTGTCCAATCTCTAAAGCCTGAAATGATTTTATCTAAGCCAAAACCACATAATTGTATGAATACCGACCATTTCCTGTTGTACTCAAGT
AGCTTTTATACTCAATATAGATATTGAGCTCATGTGAAACTTGCACTGACCATCACAACATACTAGGTTTCACAGGTGAGCTGGTAATTCTAATTTGTTTGTCACTCACC
AGTTACTAATATGTTCCGTTTTACGAGTAAATGAGGACAAACCAACACAACAGTATGTTGAAATCAAAC

Protein sequence

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MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAA
SVGACIEVKVPDEELAILLSNL

PI0022152 (gene) of Melon (PI 482460) v1 genome