; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022161 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022161
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionVoltage-dependent T-type calcium channel subunit alpha-1I (Ca(V)3.3) like
Genome locationchr11:5872770..5873566
RNA-Seq ExpressionPI0022161
SyntenyPI0022161
Gene Ontology termsGO:0045490 - pectin catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8038882.1 hypothetical protein FH972_011351 [Carpinus fangiana]5.4e-1244.23Show/hide
Query:  SSFPQN-----PNPRFFFTPSFLSFLLNLFSTFKLSLPEQRKMEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHG
        +SFP+      P+   F  P + S +  ++S FK     +R+ E E +   +LG+LGR CYAVLCLGVLL++V + H V   EP+DPRER+ RRLR L G
Subjt:  SSFPQN-----PNPRFFFTPSFLSFLLNLFSTFKLSLPEQRKMEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHG

Query:  SSIR
           R
Subjt:  SSIR

KAE8647058.1 hypothetical protein Csa_023003, partial [Cucumis sativus]1.4e-2390.77Show/hide
Query:  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHGSSIRGGD
        MEAETA+AAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEP+DPRER+KRRLR LHGSSI G D
Subjt:  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHGSSIRGGD

KAG6570773.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2193.1Show/hide
Query:  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHG
        ME ETAV AILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEP+DPRERSKRRLR LHG
Subjt:  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHG

KAG7010620.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-2193.1Show/hide
Query:  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHG
        ME ETAV AILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEP+DPRERSKRRLR LHG
Subjt:  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHG

XP_023512260.1 syntaxin-71-like [Cucurbita pepo subsp. pepo]2.9e-2193.1Show/hide
Query:  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHG
        ME ETAV AILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEP+DPRERSKRRLR LHG
Subjt:  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHG

TrEMBL top hitse value%identityAlignment
A0A0A0KC65 Uncharacterized protein6.4e-2786.67Show/hide
Query:  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHGSSIRGGDGGRQLRSVVN
        MEAETA+AAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEP+DPRER+KRRLR LHGSSI G D  RQL +VVN
Subjt:  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHGSSIRGGDGGRQLRSVVN

A0A5E4FUM3 Uncharacterized protein3.2e-1062.26Show/hide
Query:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHGSSIR
        +LG+LGR CYAVLCLGV++L V +V+YVG  E  DP ER++RRLRA+HG  +R
Subjt:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHGSSIR

A0A660KR43 MLO-like protein2.6e-1244.23Show/hide
Query:  SSFPQN-----PNPRFFFTPSFLSFLLNLFSTFKLSLPEQRKMEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHG
        +SFP+      P+   F  P + S +  ++S FK     +R+ E E +   +LG+LGR CYAVLCLGVLL++V + H V   EP+DPRER+ RRLR L G
Subjt:  SSFPQN-----PNPRFFFTPSFLSFLLNLFSTFKLSLPEQRKMEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHG

Query:  SSIR
           R
Subjt:  SSIR

A0A7N2KN99 Uncharacterized protein1.7e-1170.37Show/hide
Query:  VAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHGSS
        V  +LG+L RHCYAVLCLGVLLL+V + HYV   EPSDPRER+ RRLRA HG S
Subjt:  VAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRLRALHGSS

B9SK55 Uncharacterized protein9.3e-1061.02Show/hide
Query:  VAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGD--GEP-SDPRERSKRRLRALHGSSIR
        V  +LGRLGR CYAVLCLG++L+ V++  YVGD  GE  SDP+ER++RRLRA+HG  +R
Subjt:  VAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGD--GEP-SDPRERSKRRLRALHGSSIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATCCCTCTTTTCAAATCCTCATCCCTATCCAATTCTCAATCATTACACCATTTTTCTTCGTTTCCCCAAAACCCTAATCCACGATTCTTCTTCACCCCTTCTTT
TCTATCTTTCTTATTAAATCTCTTTTCCACTTTCAAACTTTCCTTACCGGAGCAAAGAAAAATGGAGGCGGAGACTGCGGTGGCGGCGATTCTCGGAAGATTGGGGCGTC
ATTGCTATGCGGTTTTGTGTTTGGGAGTTCTTCTTCTGACGGTGGCCGTAGTTCACTACGTTGGGGACGGAGAGCCTAGCGATCCACGCGAGCGGAGCAAGCGCCGTCTT
CGGGCCTTGCACGGCTCATCAATTCGCGGCGGAGATGGCGGGCGTCAGTTGCGTTCGGTGGTGAATTGA
mRNA sequenceShow/hide mRNA sequence
CAATTGTGAGACCCACCAAACAAATGCCCATAGCACACAGTAATGAGAATCCCTCTTTTCAAATCCTCATCCCTATCCAATTCTCAATCATTACACCATTTTTCTTCGTT
TCCCCAAAACCCTAATCCACGATTCTTCTTCACCCCTTCTTTTCTATCTTTCTTATTAAATCTCTTTTCCACTTTCAAACTTTCCTTACCGGAGCAAAGAAAAATGGAGG
CGGAGACTGCGGTGGCGGCGATTCTCGGAAGATTGGGGCGTCATTGCTATGCGGTTTTGTGTTTGGGAGTTCTTCTTCTGACGGTGGCCGTAGTTCACTACGTTGGGGAC
GGAGAGCCTAGCGATCCACGCGAGCGGAGCAAGCGCCGTCTTCGGGCCTTGCACGGCTCATCAATTCGCGGCGGAGATGGCGGGCGTCAGTTGCGTTCGGTGGTGAATTG
AAGCGCTTTTTAAGGGAATGTTTATGCAATAATTACTAATTTTGTTATGTTTTTGTAAAAGGGTAATAAATAGTTTAATTAGTACTGATTCCTCATGGGGTAACAAAATG
TAAATTATTTGGTTCTTTTTGTGTAAATTCCAATGTGAGATTTTTGTGAAATAAATTATCATTATCATTATGAGCTATAATTAGGGATAAATAGTGCAATGGCTTAGACC
CACCCGACCCTAATTAGCCCGGTTCTGTAATAAAGAGAATAGTTTATGTATGACCAAACGGAAACAGTGGAAACAGTGCACTCATCTTTAATGCAATTGAAGAGGTTGTA
GAAAGATGGGTGGAGTATGAATTATCC
Protein sequenceShow/hide protein sequence
MRIPLFKSSSLSNSQSLHHFSSFPQNPNPRFFFTPSFLSFLLNLFSTFKLSLPEQRKMEAETAVAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPSDPRERSKRRL
RALHGSSIRGGDGGRQLRSVVN