CuGenDBv2

Gene ID	PI0022195
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	exopolygalacturonase-like
Genome location	chr01:3719925..3721593
RNA-Seq Expression	PI0022195
Synteny	PI0022195
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0004650 - polygalacturonase activity (molecular function)
InterPro domains	IPR000743 - Glycoside hydrolase, family 28 IPR011050 - Pectin lyase fold/virulence factor IPR012334 - Pectin lyase fold

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0059116.1 exopolygalacturonase-like [Cucumis melo var. makuwa]

1.8e-171

80.1

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Query:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD
        M LLSFT+ESRSHVDVIF L KYG+IV GADVT+ALK    DACAS+ PSAVVIPKG FKVREGEFKGPCKS IE+R RGTLQAPKH +GDSWITF YVD
Subjt:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD

Query:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR
        RMTLSGGG          +KNDCHK I CA LPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTF  VNIIAPEDSPNTD IHIGRSIGIS+LKSR
Subjt:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR

Query:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP
        IATGDDCISLGDGSKRV++TNVTCGPGHGISIG L                   +NTTNGVRIKTWPASP+AG ATNMHF DITMVNV+NPILIDQEYCP
Subjt:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP

Query:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTT
        WNQCNRKIPSKIKINKVSFKNIRGSSATPV V LICSSNLPCEEVKVANI+LVYNGI+G +TS+CMNV PIIS  Q+ PICSSSYTT
Subjt:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTT

XP_008455553.1 PREDICTED: exopolygalacturonase-like [Cucumis melo]

2.2e-172

80.1

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Query:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD
        M LLSFT+ESRSHVDVIF L KYG+IV GADVT+ALK    DACAS+ PSAVVIPKG FKVREGEFKGPCKS +E+R RGTLQAPKH +GDSWITF YVD
Subjt:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD

Query:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR
        RMTLSGGG          +KNDCHKHI+CA LPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTF  VNIIAPEDSPNTD IHIGRSIGIS+LKSR
Subjt:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR

Query:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP
        IATGDDCISLGDGSKRV++TNVTCGPGHGISIG L                   +NTTNGVRIKTWPASP+AG ATNMHF DITMVNV+NPILIDQEYCP
Subjt:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP

Query:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTT
        WNQCNRKIPSKIKINKVSFKNIRGSSATPV V LICSSNLPCEEVKVANI+LVYNGI+G +TS+CMNV PIIS  Q+ PICSSSYTT
Subjt:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTT

XP_031741749.1 exopolygalacturonase-like [Cucumis sativus]

7.0e-171

79.74

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Query:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD
        M+LLSFTIESRSH+DVIFPL KYG+IV GADVT+ALK    DACASVHPSAVVIPKGIFKVREG+FKGPCKS IEIR RGTLQAPKH YGDSWITF YVD
Subjt:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD

Query:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR
        RMTLSGGG          +KNDCHK I+CANLPISLRF+FITNSIVRRITSL+SKNFHVNILGCNNLTF  VNIIAPEDSPNTD IHIGRSIGIS+LKSR
Subjt:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR

Query:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP
        IATGDDCISLGDGSK+V+V NVTCGPGHGISIG L                   +NTTNGVRIKTWP SP AG ATNMHFSDITMVNV+NPILIDQEYCP
Subjt:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP

Query:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTTSK
        WNQCNR+IPS IKINKVSF+NIRGSSATPV V LICSSNLPC+EVKVANI+L+YNGI G ITSQCMNV PIIS IQ+  IC SSYTT SK
Subjt:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTTSK

XP_031742281.1 exopolygalacturonase-like [Cucumis sativus]

1.8e-171

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Query:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD
        M+LLSF IESRSHVDVIFPL KYG+IV GADVT+ALK    DACASV PSAVVIPKGIFKVREGEFKGPCKS IEIR RGTLQAPKH +GDSWITF YVD
Subjt:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD

Query:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR
        RMTLSGGG          +KNDCHK I+CANLPISLRF+FITNSIV+RITSLDSKNFHVNILGCNNLTF  VNIIAPEDSPNTD IHIGRSIGIS+LKS+
Subjt:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR

Query:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP
        IATGDDCISLGDGSKRV++TNVTCGPGHGISIG L                   +NTTNGVRIKTWPASP AG AT+MHFSDITMVNV+NPILIDQEYCP
Subjt:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP

Query:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTTSK
        WNQCNR+IPS IKIN VSFKNIRGSSATPV V LICSSN PCEEVKVANI+LVYNGI GPITSQCMNV PI+S IQ+  ICSSSYTT SK
Subjt:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTTSK

XP_031742552.1 exopolygalacturonase-like [Cucumis sativus]

9.7e-173

79.23

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Query:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD
        M+LLSFTIES SHVDV+FPL KYG++V GADVT+ALK    DACASV PSAVVIP+GIFKVREGEFKGPCKS IEIR RGTLQAPKH YGDSWITF YVD
Subjt:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD

Query:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR
        RM LSGGG          +KNDCHKH NCANLPISLRFNF+TNSIVRRITSLDSKNFHVNILGCNNLTF  VNIIAP DSPNTD IHIGRSIGIS+LKSR
Subjt:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR

Query:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP
        IATGDDCISLGDGSKR++V NVTCGPGHGISIG L                   +NTTNGVRIKTWP SP+AG ATNMHFSDITMVNV+NPI+IDQEYCP
Subjt:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP

Query:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTTSK
        WNQCNRKIPS IKINKVSFKNIRGSSATPV V LICSSNLPCEEVK++NI+L+YNGI+G ITSQCMNV PII  IQ+ PICSSSYTT SK
Subjt:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTTSK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K3B7 Uncharacterized protein

3.0e-167

78.46

Show/hide

Query:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD
        M+LLSFTIE+RSHVD IF L KYG+IV GADVT+ALK    DACAS  PSAVVIPKG FKVREGEFKGPCKS IE R  GTLQAPKH +GDSWITF YVD
Subjt:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD

Query:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR
        RM LSGGG          +KNDCHK I+CA LPISLRF+FITNSIVRRITSLDSKNFHVNILGCNNLTF  VNIIAPE+SPNTD IHIGRSIGIS+LKSR
Subjt:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR

Query:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP
        IATGDDCISLGDGSKR++V NV CGPGHGISIG L                   +NTTNGVRIKTWPASP+AG ATNMHFSDITMVNV+NPILIDQEYCP
Subjt:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP

Query:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTTSK
        WNQCNR+IPS IKINKVSFKNIRGSSATPV V LICSSNLPCEEVKVANI+LVYNGI+G ITS+CMNV PIIS IQ+ PICSSSYTT SK
Subjt:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTTSK

A0A1S3C2F4 exopolygalacturonase-like

1.1e-172

80.1

Show/hide

Query:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD
        M LLSFT+ESRSHVDVIF L KYG+IV GADVT+ALK    DACAS+ PSAVVIPKG FKVREGEFKGPCKS +E+R RGTLQAPKH +GDSWITF YVD
Subjt:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD

Query:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR
        RMTLSGGG          +KNDCHKHI+CA LPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTF  VNIIAPEDSPNTD IHIGRSIGIS+LKSR
Subjt:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR

Query:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP
        IATGDDCISLGDGSKRV++TNVTCGPGHGISIG L                   +NTTNGVRIKTWPASP+AG ATNMHF DITMVNV+NPILIDQEYCP
Subjt:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP

Query:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTT
        WNQCNRKIPSKIKINKVSFKNIRGSSATPV V LICSSNLPCEEVKVANI+LVYNGI+G +TS+CMNV PIIS  Q+ PICSSSYTT
Subjt:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTT

A0A5A7UY44 Exopolygalacturonase-like

8.9e-172

80.1

Show/hide

Query:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD
        M LLSFT+ESRSHVDVIF L KYG+IV GADVT+ALK    DACAS+ PSAVVIPKG FKVREGEFKGPCKS IE+R RGTLQAPKH +GDSWITF YVD
Subjt:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD

Query:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR
        RMTLSGGG          +KNDCHK I CA LPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTF  VNIIAPEDSPNTD IHIGRSIGIS+LKSR
Subjt:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR

Query:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP
        IATGDDCISLGDGSKRV++TNVTCGPGHGISIG L                   +NTTNGVRIKTWPASP+AG ATNMHF DITMVNV+NPILIDQEYCP
Subjt:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP

Query:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTT
        WNQCNRKIPSKIKINKVSFKNIRGSSATPV V LICSSNLPCEEVKVANI+LVYNGI+G +TS+CMNV PIIS  Q+ PICSSSYTT
Subjt:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTT

A0A5D3DD75 Exopolygalacturonase-like

1.1e-172

80.1

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Query:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD
        M LLSFT+ESRSHVDVIF L KYG+IV GADVT+ALK    DACAS+ PSAVVIPKG FKVREGEFKGPCKS +E+R RGTLQAPKH +GDSWITF YVD
Subjt:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALK----DACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD

Query:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR
        RMTLSGGG          +KNDCHKHI+CA LPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTF  VNIIAPEDSPNTD IHIGRSIGIS+LKSR
Subjt:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR

Query:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP
        IATGDDCISLGDGSKRV++TNVTCGPGHGISIG L                   +NTTNGVRIKTWPASP+AG ATNMHF DITMVNV+NPILIDQEYCP
Subjt:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP

Query:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTT
        WNQCNRKIPSKIKINKVSFKNIRGSSATPV V LICSSNLPCEEVKVANI+LVYNGI+G +TS+CMNV PIIS  Q+ PICSSSYTT
Subjt:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTT

A0A6J1C2C8 exopolygalacturonase-like

1.1e-150

70.65

Show/hide

Query:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKAL----KDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD
        M LL FT ++RS VDV++ L KYG +V GADV++AL    KDACASV PSAVVIP+GIFKV +G F+GPCKS IE R RGTLQAP H  G+SWITF Y+D
Subjt:  MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKAL----KDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVD

Query:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR
        R+TL GGG          +KNDCHK INCA LPISLRF+FITNS V+RITSLDSK+FHVNILGCNNLTFH VNIIAPEDSPNTD IHIGRS GI++ KSR
Subjt:  RMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSR

Query:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP
        IATGDDCISLGDGSKR++VTNVTCGPGHGISIG L                   +NTTNGVRIKTWPAS   GTATNMHF DI MVNV++PILIDQEYCP
Subjt:  IATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCP

Query:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSY
        WNQCNR+IPSKIKI+KV+FKNIRGSSATPV V LICSS LPC+EVK+ +I+L Y GI+GP+TSQC NV PI+S  Q+  ICSS Y
Subjt:  WNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSY

SwissProt top hits

e value

%identity

Alignment

P24548 Exopolygalacturonase (Fragment)

1.5e-91

49.29

Show/hide

Query:  VTKALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQA---PKHSYGDSWITFTYVDRMTLSGGG----------KKNDCHKH-INCAN
        +T A K+ACAS  PS +++PKG F V     +GPCKSSI ++ +GTL+A   P    G  WI    +D +T+ GGG           +NDCHK+   C  
Subjt:  VTKALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQA---PKHSYGDSWITFTYVDRMTLSGGG----------KKNDCHKH-INCAN

Query:  LPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCGPGHGIS
        L ++LR   +TNSI+R +T+LDSKNFHVN++GC NLTF    I A E S NTD IHIGRS G++++ + I TGDDCISLGDGSK + +TN+TCGPGHGIS
Subjt:  LPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCGPGHGIS

Query:  IGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSSATPVE
        +G L                     + NGVRIKTWP S   G A+ MHF DITM +V  PILIDQ YCP+NQC  ++PS +K++K+SFKNI+G+S T   
Subjt:  IGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSSATPVE

Query:  VILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSS
        V L+CS + PC  V++A+I+L Y+G  GP TS C N+ P I   Q   ICS S
Subjt:  VILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSS

P35337 Polygalacturonase

9.1e-89

45.51

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Query:  PGADVT----KALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSY--GDSWITFTYVDRMTLSGGG----------KKNDCHK
        P +D+T    KA   AC +  PS V+IPKG FK+ E    GPCKS IE   +G ++    S    D W+ F  ++   L+GGG          K N+CHK
Subjt:  PGADVT----KALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSY--GDSWITFTYVDRMTLSGGG----------KKNDCHK

Query:  HINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCG
           C  LPIS+RF+F+ N+ ++ +TSLD+KNFH N++   N+TF N+ IIAP +SPNTD IH+GR  G+ +L ++IATGDDCIS+GDG K + +  V CG
Subjt:  HINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCG

Query:  PGHGISIGKLHNV-----------------NTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGS
        PGHGIS+G L                     T+NG+RIKTWP++    TA  +HF DI +  V+NPILIDQEYCPWNQCN+  PS IK+  ++F+NIRG+
Subjt:  PGHGISIGKLHNV-----------------NTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGS

Query:  SATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPIC
        S     V L+CS   PCE V++ +IN+ Y G +GP T +C NV P +   Q+   C
Subjt:  SATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPIC

Q05967 Polygalacturonase

1.5e-88

43.97

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Query:  IFPLWKYGDIVPGADVTKAL----KDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYG---DSWITFTYVDRMTLSGGGKKN--
        +F + KYG     AD+++AL    K+AC S  PS +VIPKG F + + + +GPCKS +E++ + TL+AP          W+T   +D+ T+SGGG  +  
Subjt:  IFPLWKYGDIVPGADVTKAL----KDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYG---DSWITFTYVDRMTLSGGGKKN--

Query:  -----DCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKR
             +C +   C  LP +L FN +TNS ++ IT+LDSK+FHVN+  C NLTF   N+ AP +SPNTD IH+ RS  +++  S  +TGDDCIS+GD +++
Subjt:  -----DCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKR

Query:  VRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINK
        + +T VTCGPGHGIS+G L                    NT NGVRIKTWPAS   G   ++HF DI + NV+NP++IDQ YCP+N+CN+ +PS++KI+K
Subjt:  VRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINK

Query:  VSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTTS
        VSF+NI+G+S T   V L+ S  +PCE ++V +I++ Y+G EGP  S C N+ P +   Q+ P+C++S  ++S
Subjt:  VSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTTS

Q39766 Polygalacturonase

3.4e-88

44.25

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Query:  LLSFTIESRSHVDVIFPLWKYGDIVPG-ADVTK----ALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAP--KHSYGD-SWITFTY
        LL F   S+   D    + K+G    G  D++K    A K+ACASV PS VVIPKG + + +   +GPCK+ IEI  +GT+QAP    ++ D +W+ F  
Subjt:  LLSFTIESRSHVDVIFPLWKYGDIVPG-ADVTK----ALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAP--KHSYGD-SWITFTY

Query:  VDRMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLK
        V+   + GGG          +KN C      + LP+++RF+F+TN++++ ITS DSK FH+N+  C N+T   + I AP++SPNTD IH+G+S G++++ 
Subjt:  VDRMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLK

Query:  SRIATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEY
        S I TGDDCIS+GDG+K + +  +TCGPGHGISIG L                    NT+NG RIKTWP     G  + +HF DITM NV++PILIDQ+Y
Subjt:  SRIATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEY

Query:  CPWNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPI-ISRIQHSPICSSSYTTT
        CPWN+C +   SK+K++ +SFKNIRG+SA P  +  ICS + PC+ V++A+I++ +NG E P TSQC+NV PI I ++   P CS     T
Subjt:  CPWNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPI-ISRIQHSPICSSSYTTT

Q39786 Polygalacturonase

2.0e-88

44.1

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Query:  LLSFTIESRSHVDVIFPLWKYGDIVPG-ADVTK----ALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAP--KHSYGD-SWITFTY
        LL F   S+   D    + K+G    G  D++K    A K+ACASV PS VVIPKG + + +   +GPCK+ IEI  +GT+QAP    ++ D +W+ F  
Subjt:  LLSFTIESRSHVDVIFPLWKYGDIVPG-ADVTK----ALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAP--KHSYGD-SWITFTY

Query:  VDRMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLK
        V+   + GGG          +KN C      + LP+++RF+F+TN++++ ITS DSK FH+N+  C N+T   + I AP++SPNTD IH+G+S G++++ 
Subjt:  VDRMTLSGGG----------KKNDCHKHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLK

Query:  SRIATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEY
        S I TGDDCIS+GDG+K + +  +TCGPGHGISIG L                    NT+NG RIKTWP     G  + +HF DITM NV++PILIDQ+Y
Subjt:  SRIATGDDCISLGDGSKRVRVTNVTCGPGHGISIGKLHN-----------------VNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEY

Query:  CPWNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTT
        CPWN+C +   SK+K++ +SFKNIRG+SA P  +  ICS + PC+ V++A+I++ +NG E P TSQC+NV PI S   +   CS     T
Subjt:  CPWNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTT

Arabidopsis top hits

e value

%identity

Alignment

AT3G07820.1 Pectin lyase-like superfamily protein

4.2e-97

48.46

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Query:  GADVT----KALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSY--GDSWITFTYVDRMTLSGGG----------KKNDCHKH
        G+D+T    KA   AC S  PS VVIPKG FK+ E E +GPCK+ IE+  +GT++A  ++    + W+ F  +D   L+GGG          + N+CHK 
Subjt:  GADVT----KALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSY--GDSWITFTYVDRMTLSGGG----------KKNDCHKH

Query:  INCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCGP
          C  LPIS+RF+FI NS +R I+S+D+KNFH+N+LG  N+T +N+ I+APEDSPNTD IH+GRS G+ +L S I+TGDDCIS+GDG K + V  VTCGP
Subjt:  INCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCGP

Query:  GHGISIGKLHNV-----------------NTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSS
        GHGIS+G L                     T NG+RIKTWP++  + TA+++HF DI + +V+NPILIDQEYCPWNQCN++  S IK+  +SFKNIRG+S
Subjt:  GHGISIGKLHNV-----------------NTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSS

Query:  ATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSS
             V L+CS   PC+ V++ +I++ YNG +GP T  C NV+P I   Q    CS+
Subjt:  ATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSS

AT3G07830.1 Pectin lyase-like superfamily protein

2.3e-95

47.49

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Query:  PGADVTKAL----KDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSY--GDSWITFTYVDRMTLSGGG----------KKNDCHK
        PG+D+T+AL      AC S  P  VVIPKG FK+ E    GPCKS +EI   GT+ A  +S    + W+ F  +D   L+GGG          + N+CHK
Subjt:  PGADVTKAL----KDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSY--GDSWITFTYVDRMTLSGGG----------KKNDCHK

Query:  HINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCG
           C  LPIS+RF+F+TN+ +R I+S+D+KNFH+N++G  N+TF NV I+AP +SPNTD IH+GRS+G+S++ SRI+TGDDC+S+GDG   + V NV CG
Subjt:  HINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCG

Query:  PGHGISIGKLHNV-----------------NTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGS
        PGHGIS+G L                     T NG+RIKTWP++  + TA+N+HF +I + NV+NPILIDQEYCPWNQCN++  S IK+  +SF+ IRG+
Subjt:  PGHGISIGKLHNV-----------------NTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGS

Query:  SATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSS
        S     V L+CS   PCE V+V +IN+ Y G +GP T  C NV P +   Q    C++
Subjt:  SATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSS

AT3G07840.1 Pectin lyase-like superfamily protein

1.3e-95

48.2

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Query:  PGADVT----KALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSY--GDSWITFTYVDRMTLSGGG----------KKNDCHK
        PG+D+T    KA   AC +   S VVI KG FK+ E E  GPCK+ +EI  +GTL+A   +    + W+ F  ++   L+GGG          + N+CHK
Subjt:  PGADVT----KALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSY--GDSWITFTYVDRMTLSGGG----------KKNDCHK

Query:  HINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCG
           C  LPIS+RF+F+ N+ +R I+S+D+KNFH+N+LG  N+TF NV +IAP +SPNTD IH+GRS G+ +L S+IATGDDCIS+GDG K + V NV CG
Subjt:  HINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCG

Query:  PGHGISIGKLHNV-----------------NTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGS
        PGHGIS+G L                     T NG+RIKTWP++  A TA+ +HF +I + NV+NPILIDQEYCPWNQCN++ PS IK+  +SFKNIRG+
Subjt:  PGHGISIGKLHNV-----------------NTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGS

Query:  SATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYT
        S     V L+CS   PC  V++ NINL Y G +GP T  C NV+P +   Q+   CS+  T
Subjt:  SATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYT

AT3G14040.1 Pectin lyase-like superfamily protein

2.9e-82

46.36

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Query:  ALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAP-------KHSYGDSWITFTYVDRMTLSG-----------GGKKNDCHKHINCA
        A K+ACA+   S + +PKG + V   EFKGPCK  + +   G  +AP        H+    WI F  +   TL+G             K NDC K   C 
Subjt:  ALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAP-------KHSYGDSWITFTYVDRMTLSG-----------GGKKNDCHKHINCA

Query:  NLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCGPGHGI
        +LPI++RF  +TNS +  ITS +SK FH+NIL C N+T  ++ I AP +S NTD IHIGRS G++++ ++I TGDDC+S+GDG++ + V NV CGPGHGI
Subjt:  NLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCGPGHGI

Query:  SIGKLHNV-----------------NTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSSATPV
        SIG L                    NT NGVRIKTWP SP  G A+N+ F DITM NV+ P+LIDQEYCP+  C   +PSK+K++ V+ KNI+G+SAT V
Subjt:  SIGKLHNV-----------------NTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSSATPV

Query:  EVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIIS
         V L+CS  +PC  + +++INLV+NG EGP  S C N+ PI+S
Subjt:  EVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIIS

AT5G48140.1 Pectin lyase-like superfamily protein

5.1e-95

47.53

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Query:  PGADVT----KALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYG-DSWITFTYVDRMTLSGGG----------KKNDCHKH
        PG+D+T    KA  +AC     S V+IPKG +K+ E    GPCK+ I I   GT++A  ++ G + W+ F  ++   L+GGG          + N+CHK 
Subjt:  PGADVT----KALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYG-DSWITFTYVDRMTLSGGG----------KKNDCHKH

Query:  INCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCGP
         NC  LPIS+RF+F+T++ +R ITSLD+K+FH+N++G  N+TF +V IIAP +SPNTD IH+GRS GI ++ S I+TGDDC+S+GDG K + V  VTCGP
Subjt:  INCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCGP

Query:  GHGISIGKL----HNVN-------------TTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSS
        GHGISIG L    H  N             T NG+RIKTWP++    TA+++HF +I + NV+NPILIDQEYCPWNQCN++ PS IK+  +SFK IRG+S
Subjt:  GHGISIGKL----HNVN-------------TTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSS

Query:  ATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTTSK
             V L+CS   PC+ V+V ++N+ Y G +GP T QC NV+P +   Q    CSS  T   K
Subjt:  ATPVEVILICSSNLPCEEVKVANINLVYNGIEGPITSQCMNVNPIISRIQHSPICSSSYTTTSK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGACATTGCTATCATTTACTATAGAGTCTCGATCTCATGTTGATGTTATTTTTCCTTTGTGGAAGTATGGTGACATTGTGCCTGGTGCCGATGTCACTAAGGCTTTGAA
AGATGCATGTGCATCTGTTCATCCAAGTGCGGTGGTTATTCCAAAGGGAATATTTAAAGTAAGAGAAGGAGAATTTAAAGGCCCTTGCAAGAGTTCTATTGAAATTCGAT
TTCGTGGAACTTTGCAGGCTCCAAAACACTCTTATGGAGATAGTTGGATTACTTTTACATATGTTGATAGAATGACACTATCAGGTGGAGGAAAAAAGAATGATTGCCAT
AAACATATAAATTGTGCTAACCTCCCTATTAGTTTAAGGTTCAACTTCATTACCAATTCAATTGTGAGGAGAATAACATCACTTGATAGCAAAAACTTTCATGTCAACAT
CCTAGGGTGCAACAACCTCACATTCCACAATGTTAACATAATTGCACCAGAAGATAGTCCCAACACAGACGAAATACACATTGGTCGATCAATTGGGATCTCAGTCTTGA
AATCTCGAATAGCAACAGGAGATGATTGCATCTCACTTGGAGATGGAAGCAAACGAGTAAGAGTCACCAATGTGACATGTGGGCCAGGTCATGGAATAAGCATAGGAAAA
CTGCACAATGTAAACACCACTAATGGTGTTAGGATCAAAACATGGCCAGCCTCTCCTATTGCCGGTACTGCCACCAACATGCATTTTTCAGACATTACAATGGTCAACGT
TAACAACCCAATTCTCATAGACCAAGAGTACTGCCCATGGAATCAGTGCAATCGTAAGATTCCGTCAAAGATTAAGATTAATAAAGTGAGCTTCAAGAACATTAGAGGAA
GTTCTGCAACTCCAGTAGAAGTCATACTTATTTGTAGTAGCAACCTACCATGTGAAGAAGTAAAAGTAGCCAACATTAACCTCGTATATAATGGAATAGAAGGTCCTATT
ACATCTCAATGTATGAATGTGAACCCGATCATTTCAAGGATACAGCATTCTCCAATTTGCTCTTCCTCTTACACTACTACTTCAAAATAA

mRNA sequence

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Protein sequence

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MTLLSFTIESRSHVDVIFPLWKYGDIVPGADVTKALKDACASVHPSAVVIPKGIFKVREGEFKGPCKSSIEIRFRGTLQAPKHSYGDSWITFTYVDRMTLSGGGKKNDCH
KHINCANLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFHNVNIIAPEDSPNTDEIHIGRSIGISVLKSRIATGDDCISLGDGSKRVRVTNVTCGPGHGISIGK
LHNVNTTNGVRIKTWPASPIAGTATNMHFSDITMVNVNNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSSATPVEVILICSSNLPCEEVKVANINLVYNGIEGPI
TSQCMNVNPIISRIQHSPICSSSYTTTSK

PI0022195 (gene) of Melon (PI 482460) v1 genome